RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 IFI16Q16666 785 aaKnown RBP12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 RUFY4Q6ZNE9 571 aa12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 ARFGAP2Q8N6H7 521 aa12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 HVCN1Q96D96 273 aa12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 HES6Q96HZ4 224 aa12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 ALG6Q9Y672 507 aa12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 EMSYQ7Z589 1322 aa12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 ARHGEF35A5YM69 484 aa12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 FTLP02792 175 aaPredicted RBP12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 CLTAP09496 248 aa12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 POTEJP0CG39 1038 aa12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 PCNAP12004 261 aa12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 EPHX2P34913 555 aa12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 SCTRP47872 440 aa12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 MYL7Q01449 175 aa12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 BNIP1Q12981 228 aa12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 MTMR1Q13613 665 aa12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 PPP1R7Q15435 360 aa12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 ANKRD20A8PQ5CZ79 823 aa12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 LDLRAD1Q5T700 205 aa12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 HIBCHQ6NVY1 386 aaPredicted RBP12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 TTC27Q6P3X3 843 aa12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 C6orf89Q6UWU4 347 aa12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 TBC1D1Q86TI0 1168 aaPredicted RBP12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 FAM228AQ86W67 206 aa12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 JAMLQ86YT9 394 aa12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 LRRC34Q8IZ02 419 aa12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 ANKRD42Q8N9B4 389 aa12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 SLC30A5Q8TAD4 765 aa12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 TOPORSQ9NS56 1045 aaPredicted RBP12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 SUCLA2Q9P2R7 463 aaPredicted RBP12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 CTNNAL1Q9UBT7 734 aa12.3□□□□□ -0.44
CDK5RAP3-231ENST00000584063 BRCA2P51587 3418 aa12.29□□□□□ -0.44
CDK5RAP3-231ENST00000584063 DNAH12Q6ZR08 3092 aa12.29□□□□□ -0.44
CDK5RAP3-231ENST00000584063 FRMPD4Q14CM0 1322 aa12.29□□□□□ -0.44
CDK5RAP3-231ENST00000584063 RPL21P46778 160 aaKnown RBP12.29□□□□□ -0.44
CDK5RAP3-231ENST00000584063 PMS2P54278 862 aa12.29□□□□□ -0.44
CDK5RAP3-231ENST00000584063 MAP7D1Q3KQU3 841 aa12.29□□□□□ -0.44
CDK5RAP3-231ENST00000584063 GKAP1Q5VSY0 366 aaPredicted RBP12.29□□□□□ -0.44
CDK5RAP3-231ENST00000584063 CYB5D1Q6P9G0 228 aa12.29□□□□□ -0.44
CDK5RAP3-231ENST00000584063 PADI6Q6TGC4 694 aa12.29□□□□□ -0.44
CDK5RAP3-231ENST00000584063 RTL10Q7L3V2 364 aa12.29□□□□□ -0.44
CDK5RAP3-231ENST00000584063 EEPD1Q7L9B9 569 aa12.29□□□□□ -0.44
CDK5RAP3-231ENST00000584063 PRUNE1Q86TP1 453 aa12.29□□□□□ -0.44
CDK5RAP3-231ENST00000584063 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.29□□□□□ -0.44
CDK5RAP3-231ENST00000584063 DDX23Q9BUQ8 820 aaKnown RBP12.29□□□□□ -0.44
CDK5RAP3-231ENST00000584063 EPB41L4BQ9H329 900 aa12.29□□□□□ -0.44
CDK5RAP3-231ENST00000584063 ENAMQ9NRM1 1142 aa12.29□□□□□ -0.44
CDK5RAP3-231ENST00000584063 SBF1O95248 1867 aa12.29□□□□□ -0.44
CDK5RAP3-231ENST00000584063 MUSKO15146 869 aa12.29□□□□□ -0.44
CDK5RAP3-231ENST00000584063 SLC16A3O15427 465 aaKnown RBP12.29□□□□□ -0.44
CDK5RAP3-231ENST00000584063 ATP9AO75110 1047 aa12.29□□□□□ -0.44
CDK5RAP3-231ENST00000584063 FAM182AQ5T1J6 154 aa12.29□□□□□ -0.44
CDK5RAP3-231ENST00000584063 MAP1SQ66K74 1059 aaPredicted RBP12.29□□□□□ -0.44
CDK5RAP3-231ENST00000584063 SDCCAG8Q86SQ7 713 aaPredicted RBP12.29□□□□□ -0.44
CDK5RAP3-231ENST00000584063 GDAP1Q8TB36 358 aa12.29□□□□□ -0.44
CDK5RAP3-231ENST00000584063 LMBR1Q8WVP7 490 aa12.29□□□□□ -0.44
CDK5RAP3-231ENST00000584063 C1orf54Q8WWF1 131 aa12.29□□□□□ -0.44
CDK5RAP3-231ENST00000584063 ZBTB10Q96DT7 871 aa12.29□□□□□ -0.44
CDK5RAP3-231ENST00000584063 SAAL1Q96ER3 474 aa12.29□□□□□ -0.44
CDK5RAP3-231ENST00000584063 XPO6Q96QU8 1125 aaKnown RBP12.29□□□□□ -0.44
CDK5RAP3-231ENST00000584063 MXRA8Q9BRK3 442 aa12.29□□□□□ -0.44
CDK5RAP3-231ENST00000584063 BRD8Q9H0E9 1235 aa12.29□□□□□ -0.44
CDK5RAP3-231ENST00000584063 ZNF112Q9UJU3 913 aa12.29□□□□□ -0.44
CDK5RAP3-231ENST00000584063 MKL2Q9ULH7 1088 aa12.29□□□□□ -0.44
CDK5RAP3-231ENST00000584063 BZW2Q9Y6E2 419 aaKnown RBP12.29□□□□□ -0.44
CDK5RAP3-231ENST00000584063 SNCAIPQ9Y6H5 919 aa12.29□□□□□ -0.44
CDK5RAP3-231ENST00000584063 SLC16A4O15374 487 aa12.28□□□□□ -0.44
CDK5RAP3-231ENST00000584063 BAIAP3O94812 1187 aa12.28□□□□□ -0.44
CDK5RAP3-231ENST00000584063 PAHP00439 452 aa12.28□□□□□ -0.44
CDK5RAP3-231ENST00000584063 DRD4P21917 467 aa12.28□□□□□ -0.44
CDK5RAP3-231ENST00000584063 NF2P35240 595 aa12.28□□□□□ -0.44
CDK5RAP3-231ENST00000584063 SKIV2L2P42285 1042 aaKnown RBP12.28□□□□□ -0.44
CDK5RAP3-231ENST00000584063 MRPS9P82933 396 aaKnown RBP12.28□□□□□ -0.44
CDK5RAP3-231ENST00000584063 HP1BP3Q5SSJ5 553 aaPredicted RBP12.28□□□□□ -0.44
CDK5RAP3-231ENST00000584063 C1orf220Q5T0J3 134 aa12.28□□□□□ -0.44
CDK5RAP3-231ENST00000584063 DENND2CQ68D51 928 aa12.28□□□□□ -0.44
CDK5RAP3-231ENST00000584063 CCDC105Q8IYK2 499 aa12.28□□□□□ -0.44
CDK5RAP3-231ENST00000584063 FUKQ8N0W3 1084 aa12.28□□□□□ -0.44
CDK5RAP3-231ENST00000584063 ANKRD35Q8N283 1001 aa12.28□□□□□ -0.44
CDK5RAP3-231ENST00000584063 ATG4AQ8WYN0 398 aa12.28□□□□□ -0.44
CDK5RAP3-231ENST00000584063 RFFLQ8WZ73 363 aa12.28□□□□□ -0.44
CDK5RAP3-231ENST00000584063 CCDC127Q96BQ5 260 aa12.28□□□□□ -0.44
CDK5RAP3-231ENST00000584063 ERP44Q9BS26 406 aa12.28□□□□□ -0.44
CDK5RAP3-231ENST00000584063 TUFT1Q9NNX1 390 aa12.28□□□□□ -0.44
CDK5RAP3-231ENST00000584063 QPCTLQ9NXS2 382 aa12.28□□□□□ -0.44
CDK5RAP3-231ENST00000584063 AFG3L2Q9Y4W6 797 aa12.28□□□□□ -0.44
CDK5RAP3-231ENST00000584063 SNX5Q9Y5X3 404 aa12.28□□□□□ -0.44
CDK5RAP3-231ENST00000584063 C2orf81A6NN90 581 aa12.28□□□□□ -0.44
CDK5RAP3-231ENST00000584063 RGS16O15492 202 aaPredicted RBP12.28□□□□□ -0.44
CDK5RAP3-231ENST00000584063 NDUFB5O43674 189 aa12.28□□□□□ -0.44
CDK5RAP3-231ENST00000584063 PLA2G6O60733 806 aa12.28□□□□□ -0.44
CDK5RAP3-231ENST00000584063 PYGMP11217 842 aa12.28□□□□□ -0.44
CDK5RAP3-231ENST00000584063 CENPAP49450 140 aa12.28□□□□□ -0.44
CDK5RAP3-231ENST00000584063 SCNN1BP51168 640 aa12.28□□□□□ -0.44
CDK5RAP3-231ENST00000584063 PKN2Q16513 984 aaKnown RBP12.28□□□□□ -0.44
CDK5RAP3-231ENST00000584063 LRIG3Q6UXM1 1119 aa12.28□□□□□ -0.44
CDK5RAP3-231ENST00000584063 HS2ST1Q7LGA3 356 aa12.28□□□□□ -0.44
CDK5RAP3-231ENST00000584063 MIER3Q7Z3K6 550 aa12.28□□□□□ -0.44
CDK5RAP3-231ENST00000584063 SLFN11Q7Z7L1 901 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms