RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 PNMA6AP0CW24 399 aaPredicted RBP17.89■□□□□ 0.45
CDK5RAP3-230ENST00000584042 HTRA4P83105 476 aaPredicted RBP17.89■□□□□ 0.45
CDK5RAP3-230ENST00000584042 PAN2Q504Q3 1202 aaKnown RBP17.89■□□□□ 0.45
CDK5RAP3-230ENST00000584042 HS1BP3Q53T59 392 aa17.89■□□□□ 0.45
CDK5RAP3-230ENST00000584042 WDR59Q6PJI9 974 aa17.89■□□□□ 0.45
CDK5RAP3-230ENST00000584042 DPH6Q7L8W6 267 aa17.89■□□□□ 0.45
CDK5RAP3-230ENST00000584042 BAG1Q99933 345 aaPredicted RBP17.89■□□□□ 0.45
CDK5RAP3-230ENST00000584042 CISHQ9NSE2 258 aa17.89■□□□□ 0.45
CDK5RAP3-230ENST00000584042 DNAJB4Q9UDY4 337 aa17.89■□□□□ 0.45
CDK5RAP3-230ENST00000584042 SLC4A7Q9Y6M7 1214 aa17.89■□□□□ 0.45
CDK5RAP3-230ENST00000584042 HUS1O60921 280 aa17.88■□□□□ 0.45
CDK5RAP3-230ENST00000584042 CILPO75339 1184 aa17.88■□□□□ 0.45
CDK5RAP3-230ENST00000584042 GFPT2O94808 682 aa17.88■□□□□ 0.45
CDK5RAP3-230ENST00000584042 SERPING1P05155 500 aa17.88■□□□□ 0.45
CDK5RAP3-230ENST00000584042 KRT5P13647 590 aa17.88■□□□□ 0.45
CDK5RAP3-230ENST00000584042 ANXA13P27216 316 aa17.88■□□□□ 0.45
CDK5RAP3-230ENST00000584042 MAGEA10P43363 369 aaPredicted RBP17.88■□□□□ 0.45
CDK5RAP3-230ENST00000584042 RAP1GAPP47736 663 aa17.88■□□□□ 0.45
CDK5RAP3-230ENST00000584042 OR1G1P47890 313 aa17.88■□□□□ 0.45
CDK5RAP3-230ENST00000584042 SLC11A1P49279 550 aa17.88■□□□□ 0.45
CDK5RAP3-230ENST00000584042 CCZ1BP86790 482 aa17.88■□□□□ 0.45
CDK5RAP3-230ENST00000584042 CCZ1P86791 482 aaPredicted RBP17.88■□□□□ 0.45
CDK5RAP3-230ENST00000584042 CD300LGQ6UXG3 332 aa17.88■□□□□ 0.45
CDK5RAP3-230ENST00000584042 CYP26C1Q6V0L0 522 aa17.88■□□□□ 0.45
CDK5RAP3-230ENST00000584042 RBBP8NLQ8NC74 664 aaPredicted RBP17.88■□□□□ 0.45
CDK5RAP3-230ENST00000584042 APPL2Q8NEU8 664 aa17.88■□□□□ 0.45
CDK5RAP3-230ENST00000584042 SUSD3Q96L08 255 aa17.88■□□□□ 0.45
CDK5RAP3-230ENST00000584042 MMS19Q96T76 1030 aa17.88■□□□□ 0.45
CDK5RAP3-230ENST00000584042 YME1L1Q96TA2 773 aa17.88■□□□□ 0.45
CDK5RAP3-230ENST00000584042 KCNF1Q9H3M0 494 aa17.88■□□□□ 0.45
CDK5RAP3-230ENST00000584042 CWH43Q9H720 699 aa17.88■□□□□ 0.45
CDK5RAP3-230ENST00000584042 MARCH5Q9NX47 278 aa17.88■□□□□ 0.45
CDK5RAP3-230ENST00000584042 L1RE1Q9UN81 338 aa17.88■□□□□ 0.45
CDK5RAP3-230ENST00000584042 PRG3Q9Y2Y8 225 aaPredicted RBP17.88■□□□□ 0.45
CDK5RAP3-230ENST00000584042 PCDHB4Q9Y5E5 795 aa17.88■□□□□ 0.45
CDK5RAP3-230ENST00000584042 BZW2Q9Y6E2 419 aaKnown RBP17.88■□□□□ 0.45
CDK5RAP3-230ENST00000584042 SSU72P8A0A1W2PR75 194 aa17.87■□□□□ 0.45
CDK5RAP3-230ENST00000584042 M0QZQ0 153 aa17.87■□□□□ 0.45
CDK5RAP3-230ENST00000584042 WEE2P0C1S8 567 aa17.87■□□□□ 0.45
CDK5RAP3-230ENST00000584042 ODC1P11926 461 aa17.87■□□□□ 0.45
CDK5RAP3-230ENST00000584042 LAG3P18627 525 aa17.87■□□□□ 0.45
CDK5RAP3-230ENST00000584042 CD58P19256 250 aa17.87■□□□□ 0.45
CDK5RAP3-230ENST00000584042 WARSP23381 471 aaKnown RBP17.87■□□□□ 0.45
CDK5RAP3-230ENST00000584042 MAPK8IP2Q13387 824 aaPredicted RBP17.87■□□□□ 0.45
CDK5RAP3-230ENST00000584042 BTG3Q14201 252 aaPredicted RBP17.87■□□□□ 0.45
CDK5RAP3-230ENST00000584042 SOWAHAQ2M3V2 549 aa17.87■□□□□ 0.45
CDK5RAP3-230ENST00000584042 TDRD12Q587J7 1177 aaKnown RBP17.87■□□□□ 0.45
CDK5RAP3-230ENST00000584042 HGSNATQ68CP4 663 aa17.87■□□□□ 0.45
CDK5RAP3-230ENST00000584042 TMEM270Q6UE05 265 aa17.87■□□□□ 0.45
CDK5RAP3-230ENST00000584042 IRF2BP2Q7Z5L9 587 aa17.87■□□□□ 0.45
CDK5RAP3-230ENST00000584042 TMCO2Q7Z6W1 182 aaPredicted RBP17.87■□□□□ 0.45
CDK5RAP3-230ENST00000584042 UNC93AQ86WB7 457 aa17.87■□□□□ 0.45
CDK5RAP3-230ENST00000584042 TMTC1Q8IUR5 882 aa17.87■□□□□ 0.45
CDK5RAP3-230ENST00000584042 HERC6Q8IVU3 1022 aa17.87■□□□□ 0.45
CDK5RAP3-230ENST00000584042 ADGRF2Q8IZF7 708 aa17.87■□□□□ 0.45
CDK5RAP3-230ENST00000584042 TMEM86AQ8N2M4 240 aa17.87■□□□□ 0.45
CDK5RAP3-230ENST00000584042 KBTBD7Q8WVZ9 684 aa17.87■□□□□ 0.45
CDK5RAP3-230ENST00000584042 SENP8Q96LD8 212 aa17.87■□□□□ 0.45
CDK5RAP3-230ENST00000584042 COLEC11Q9BWP8 271 aa17.87■□□□□ 0.45
CDK5RAP3-230ENST00000584042 HCSTQ9UBK5 93 aa17.87■□□□□ 0.45
CDK5RAP3-230ENST00000584042 DSEQ9UL01 958 aa17.87■□□□□ 0.45
CDK5RAP3-230ENST00000584042 BARX2Q9UMQ3 279 aaPredicted RBP17.87■□□□□ 0.45
CDK5RAP3-230ENST00000584042 CYB561D2O14569 222 aa17.86■□□□□ 0.45
CDK5RAP3-230ENST00000584042 NRP1O14786 923 aa17.86■□□□□ 0.45
CDK5RAP3-230ENST00000584042 CYP26A1O43174 497 aa17.86■□□□□ 0.45
CDK5RAP3-230ENST00000584042 ARHGAP6O43182 974 aa17.86■□□□□ 0.45
CDK5RAP3-230ENST00000584042 CYP11A1P05108 521 aa17.86■□□□□ 0.45
CDK5RAP3-230ENST00000584042 GALTP07902 379 aa17.86■□□□□ 0.45
CDK5RAP3-230ENST00000584042 ATP2A2P16615 1042 aaKnown RBP17.86■□□□□ 0.45
CDK5RAP3-230ENST00000584042 TYMPP19971 482 aa17.86■□□□□ 0.45
CDK5RAP3-230ENST00000584042 USP8P40818 1118 aa17.86■□□□□ 0.45
CDK5RAP3-230ENST00000584042 PDE6CP51160 858 aa17.86■□□□□ 0.45
CDK5RAP3-230ENST00000584042 BPIFB4P59827 614 aa17.86■□□□□ 0.45
CDK5RAP3-230ENST00000584042 KLHL30Q0D2K2 578 aa17.86■□□□□ 0.45
CDK5RAP3-230ENST00000584042 ELAVL2Q12926 359 aaKnown RBP17.86■□□□□ 0.45
CDK5RAP3-230ENST00000584042 TIGD5Q53EQ6 642 aa17.86■□□□□ 0.45
CDK5RAP3-230ENST00000584042 FAM117BQ6P1L5 589 aa17.86■□□□□ 0.45
CDK5RAP3-230ENST00000584042 DSTYKQ6XUX3 929 aa17.86■□□□□ 0.45
CDK5RAP3-230ENST00000584042 PDCL2Q8N4E4 241 aa17.86■□□□□ 0.45
CDK5RAP3-230ENST00000584042 SP7Q8TDD2 431 aaPredicted RBP17.86■□□□□ 0.45
CDK5RAP3-230ENST00000584042 EPS8L1Q8TE68 723 aa17.86■□□□□ 0.45
CDK5RAP3-230ENST00000584042 RABGGTAQ92696 567 aa17.86■□□□□ 0.45
CDK5RAP3-230ENST00000584042 TRIM44Q96DX7 344 aaPredicted RBP17.86■□□□□ 0.45
CDK5RAP3-230ENST00000584042 MRPL45Q9BRJ2 306 aaKnown RBP17.86■□□□□ 0.45
CDK5RAP3-230ENST00000584042 ARHGAP20Q9P2F6 1191 aa17.86■□□□□ 0.45
CDK5RAP3-230ENST00000584042 ADAM28Q9UKQ2 775 aa17.86■□□□□ 0.45
CDK5RAP3-230ENST00000584042 FAN1Q9Y2M0 1017 aa17.86■□□□□ 0.45
CDK5RAP3-230ENST00000584042 INSL6Q9Y581 213 aa17.86■□□□□ 0.45
CDK5RAP3-230ENST00000584042 VWA8A3KMH1 1905 aa17.85■□□□□ 0.45
CDK5RAP3-230ENST00000584042 SYN3O14994 580 aa17.85■□□□□ 0.45
CDK5RAP3-230ENST00000584042 TRAPPC3O43617 180 aa17.85■□□□□ 0.45
CDK5RAP3-230ENST00000584042 SF3B1O75533 1304 aaKnown RBP eCLIP17.85■□□□□ 0.45
CDK5RAP3-230ENST00000584042 ALDH2P05091 517 aa17.85■□□□□ 0.45
CDK5RAP3-230ENST00000584042 ITGB1P05556 798 aa17.85■□□□□ 0.45
CDK5RAP3-230ENST00000584042 PAEPP09466 180 aa17.85■□□□□ 0.45
CDK5RAP3-230ENST00000584042 CLCN1P35523 988 aa17.85■□□□□ 0.45
CDK5RAP3-230ENST00000584042 CDH8P55286 799 aa17.85■□□□□ 0.45
CDK5RAP3-230ENST00000584042 BCAR1P56945 870 aa17.85■□□□□ 0.45
CDK5RAP3-230ENST00000584042 ARID5AQ03989 594 aa17.85■□□□□ 0.45
CDK5RAP3-230ENST00000584042 PTK2Q05397 1052 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms