RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 RHOT2Q8IXI1 618 aa6.91□□□□□ -1.3
SMARCE1-219ENST00000583294 TTC9BQ8N6N2 239 aa6.91□□□□□ -1.3
SMARCE1-219ENST00000583294 KBTBD7Q8WVZ9 684 aa6.91□□□□□ -1.3
SMARCE1-219ENST00000583294 MPHOSPH6Q99547 160 aaKnown RBP6.91□□□□□ -1.3
SMARCE1-219ENST00000583294 TINAGL1Q9GZM7 467 aaPredicted RBP6.91□□□□□ -1.3
SMARCE1-219ENST00000583294 TMPRSS5Q9H3S3 457 aa6.91□□□□□ -1.3
SMARCE1-219ENST00000583294 KLHL11Q9NVR0 708 aa6.91□□□□□ -1.3
SMARCE1-219ENST00000583294 STK32BQ9NY57 414 aa6.91□□□□□ -1.3
SMARCE1-219ENST00000583294 PHTF1Q9UMS5 762 aa6.91□□□□□ -1.3
SMARCE1-219ENST00000583294 MYRFQ9Y2G1 1151 aa6.91□□□□□ -1.3
SMARCE1-219ENST00000583294 MED16Q9Y2X0 877 aa6.91□□□□□ -1.3
SMARCE1-219ENST00000583294 GRXCR1A8MXD5 290 aa6.9□□□□□ -1.3
SMARCE1-219ENST00000583294 BTN3A1O00481 513 aa6.9□□□□□ -1.3
SMARCE1-219ENST00000583294 KPNA5O15131 536 aa6.9□□□□□ -1.3
SMARCE1-219ENST00000583294 TBC1D4O60343 1298 aa6.9□□□□□ -1.3
SMARCE1-219ENST00000583294 RPS6KA4O75676 772 aa6.9□□□□□ -1.3
SMARCE1-219ENST00000583294 DNAJB5O75953 348 aa6.9□□□□□ -1.3
SMARCE1-219ENST00000583294 RECQL4O94761 1208 aa6.9□□□□□ -1.3
SMARCE1-219ENST00000583294 EN2P19622 333 aaPredicted RBP6.9□□□□□ -1.3
SMARCE1-219ENST00000583294 ARFIP2P53365 341 aa6.9□□□□□ -1.3
SMARCE1-219ENST00000583294 HSD11B2P80365 405 aa6.9□□□□□ -1.3
SMARCE1-219ENST00000583294 HABP2Q14520 560 aaPredicted RBP6.9□□□□□ -1.3
SMARCE1-219ENST00000583294 R3HDM1Q15032 1099 aaKnown RBP6.9□□□□□ -1.3
SMARCE1-219ENST00000583294 BRD3Q15059 726 aa6.9□□□□□ -1.3
SMARCE1-219ENST00000583294 C3orf38Q5JPI3 329 aa6.9□□□□□ -1.3
SMARCE1-219ENST00000583294 GDF7Q7Z4P5 450 aa6.9□□□□□ -1.3
SMARCE1-219ENST00000583294 SESTD1Q86VW0 696 aa6.9□□□□□ -1.3
SMARCE1-219ENST00000583294 KRT78Q8N1N4 520 aa6.9□□□□□ -1.3
SMARCE1-219ENST00000583294 FAM46DQ8NEK8 389 aa6.9□□□□□ -1.3
SMARCE1-219ENST00000583294 EXTL1Q92935 676 aa6.9□□□□□ -1.3
SMARCE1-219ENST00000583294 PHKBQ93100 1093 aa6.9□□□□□ -1.3
SMARCE1-219ENST00000583294 SUCLG2Q96I99 432 aa6.9□□□□□ -1.3
SMARCE1-219ENST00000583294 DCLRE1CQ96SD1 692 aaKnown RBP6.9□□□□□ -1.3
SMARCE1-219ENST00000583294 ZNF768Q9H5H4 540 aaKnown RBP6.9□□□□□ -1.3
SMARCE1-219ENST00000583294 HSFX1Q9UBD0 423 aa6.9□□□□□ -1.3
SMARCE1-219ENST00000583294 A0A1B0GTW7 788 aa6.89□□□□□ -1.31
SMARCE1-219ENST00000583294 AHRRA9YTQ3 701 aa6.89□□□□□ -1.31
SMARCE1-219ENST00000583294 ISM1B1AKI9 464 aa6.89□□□□□ -1.31
SMARCE1-219ENST00000583294 PLSCR1O15162 318 aa6.89□□□□□ -1.31
SMARCE1-219ENST00000583294 ABHD16AO95870 558 aa6.89□□□□□ -1.31
SMARCE1-219ENST00000583294 GRPP07492 148 aa6.89□□□□□ -1.31
SMARCE1-219ENST00000583294 FGFR4P22455 802 aa6.89□□□□□ -1.31
SMARCE1-219ENST00000583294 PRIM2P49643 509 aa6.89□□□□□ -1.31
SMARCE1-219ENST00000583294 SLC13A2Q13183 592 aa6.89□□□□□ -1.31
SMARCE1-219ENST00000583294 IFIT5Q13325 482 aaKnown RBP6.89□□□□□ -1.31
SMARCE1-219ENST00000583294 RABL3Q5HYI8 236 aa6.89□□□□□ -1.31
SMARCE1-219ENST00000583294 SLC30A10Q6XR72 485 aa6.89□□□□□ -1.31
SMARCE1-219ENST00000583294 C11orf96Q7Z7L8 435 aa6.89□□□□□ -1.31
SMARCE1-219ENST00000583294 TMPRSS6Q8IU80 811 aa6.89□□□□□ -1.31
SMARCE1-219ENST00000583294 C1orf210Q8IVY1 113 aa6.89□□□□□ -1.31
SMARCE1-219ENST00000583294 CFAP52Q8N1V2 620 aa6.89□□□□□ -1.31
SMARCE1-219ENST00000583294 MPP5Q8N3R9 675 aa6.89□□□□□ -1.31
SMARCE1-219ENST00000583294 DDX17Q92841 729 aaKnown RBP6.89□□□□□ -1.31
SMARCE1-219ENST00000583294 PNKPQ96T60 521 aa6.89□□□□□ -1.31
SMARCE1-219ENST00000583294 KRTAP3-1Q9BYR8 98 aa6.89□□□□□ -1.31
SMARCE1-219ENST00000583294 RNPEPQ9H4A4 650 aa6.89□□□□□ -1.31
SMARCE1-219ENST00000583294 VSX1Q9NZR4 365 aaPredicted RBP6.89□□□□□ -1.31
SMARCE1-219ENST00000583294 CHST2Q9Y4C5 530 aa6.89□□□□□ -1.31
SMARCE1-219ENST00000583294 POLRMTO00411 1230 aaKnown RBP6.88□□□□□ -1.31
SMARCE1-219ENST00000583294 TRIM24O15164 1050 aa6.88□□□□□ -1.31
SMARCE1-219ENST00000583294 GPANK1O95872 356 aa6.88□□□□□ -1.31
SMARCE1-219ENST00000583294 CHEK2O96017 543 aa6.88□□□□□ -1.31
SMARCE1-219ENST00000583294 UCP3P55916 312 aa6.88□□□□□ -1.31
SMARCE1-219ENST00000583294 FAM189BP81408 668 aa6.88□□□□□ -1.31
SMARCE1-219ENST00000583294 ZNF844Q08AG5 666 aa6.88□□□□□ -1.31
SMARCE1-219ENST00000583294 CTBP1Q13363 440 aa6.88□□□□□ -1.31
SMARCE1-219ENST00000583294 TOB2Q14106 344 aaPredicted RBP6.88□□□□□ -1.31
SMARCE1-219ENST00000583294 USP39Q53GS9 565 aaKnown RBP6.88□□□□□ -1.31
SMARCE1-219ENST00000583294 SPDYAQ5MJ70 313 aa6.88□□□□□ -1.31
SMARCE1-219ENST00000583294 FOXR2Q6PJQ5 311 aa6.88□□□□□ -1.31
SMARCE1-219ENST00000583294 MAPKAPK5Q8IW41 473 aa6.88□□□□□ -1.31
SMARCE1-219ENST00000583294 FBXO41Q8TF61 875 aa6.88□□□□□ -1.31
SMARCE1-219ENST00000583294 MAML1Q92585 1016 aa6.88□□□□□ -1.31
SMARCE1-219ENST00000583294 DVL3Q92997 716 aaPredicted RBP6.88□□□□□ -1.31
SMARCE1-219ENST00000583294 TNIP3Q96KP6 325 aa6.88□□□□□ -1.31
SMARCE1-219ENST00000583294 STRBPQ96SI9 672 aaKnown RBP6.88□□□□□ -1.31
SMARCE1-219ENST00000583294 SMOQ99835 787 aa6.88□□□□□ -1.31
SMARCE1-219ENST00000583294 CNPPD1Q9BV87 410 aa6.88□□□□□ -1.31
SMARCE1-219ENST00000583294 BTBD1Q9H0C5 482 aa6.88□□□□□ -1.31
SMARCE1-219ENST00000583294 SMURF2Q9HAU4 748 aa6.88□□□□□ -1.31
SMARCE1-219ENST00000583294 MAP3K2Q9Y2U5 619 aa6.88□□□□□ -1.31
SMARCE1-219ENST00000583294 MTO1Q9Y2Z2 717 aaKnown RBP6.88□□□□□ -1.31
SMARCE1-219ENST00000583294 TMEM233B4DJY2 109 aa6.87□□□□□ -1.31
SMARCE1-219ENST00000583294 DIRC3C9JPN6 131 aa6.87□□□□□ -1.31
SMARCE1-219ENST00000583294 MYO1CO00159 1063 aa6.87□□□□□ -1.31
SMARCE1-219ENST00000583294 ERN1O75460 977 aaKnown RBP6.87□□□□□ -1.31
SMARCE1-219ENST00000583294 SPATA31D3P0C874 917 aa6.87□□□□□ -1.31
SMARCE1-219ENST00000583294 PIM1P11309 404 aaPredicted RBP6.87□□□□□ -1.31
SMARCE1-219ENST00000583294 ZNF20P17024 532 aa6.87□□□□□ -1.31
SMARCE1-219ENST00000583294 CHRM3P20309 590 aa6.87□□□□□ -1.31
SMARCE1-219ENST00000583294 AK2P54819 239 aa6.87□□□□□ -1.31
SMARCE1-219ENST00000583294 OCA2Q04671 838 aa6.87□□□□□ -1.31
SMARCE1-219ENST00000583294 NRN1LQ496H8 165 aa6.87□□□□□ -1.31
SMARCE1-219ENST00000583294 TAPT1Q6NXT6 567 aa6.87□□□□□ -1.31
SMARCE1-219ENST00000583294 SPATA31D4Q6ZUB0 917 aa6.87□□□□□ -1.31
SMARCE1-219ENST00000583294 SRLQ86TD4 932 aa6.87□□□□□ -1.31
SMARCE1-219ENST00000583294 LIX1LQ8IVB5 337 aa6.87□□□□□ -1.31
SMARCE1-219ENST00000583294 SLC15A4Q8N697 577 aa6.87□□□□□ -1.31
SMARCE1-219ENST00000583294 DNAJC5GQ8N7S2 189 aa6.87□□□□□ -1.31
SMARCE1-219ENST00000583294 IL17DQ8TAD2 202 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms