RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	CNTNAP2	Q9UHC6	1331 aa		5.66	□□□□□ -1.5
MSI2-216	ENST00000582772	OBSL1	O75147	1896 aa		5.66	□□□□□ -1.5
MSI2-216	ENST00000582772	DENND4C	Q5VZ89	1909 aa		5.66	□□□□□ -1.5
MSI2-216	ENST00000582772	PRRC2A	P48634	2157 aa	Known RBP	5.65	□□□□□ -1.5
MSI2-216	ENST00000582772	E2F8	A0AVK6	867 aa		5.65	□□□□□ -1.5
MSI2-216	ENST00000582772	MT-CO3	P00414	261 aa		5.65	□□□□□ -1.5
MSI2-216	ENST00000582772	F12	P00748	615 aa	Predicted RBP	5.65	□□□□□ -1.5
MSI2-216	ENST00000582772	MYCL	P12524	364 aa	Predicted RBP	5.65	□□□□□ -1.5
MSI2-216	ENST00000582772	CCND2	P30279	289 aa		5.65	□□□□□ -1.5
MSI2-216	ENST00000582772	KLRB1	Q12918	225 aa		5.65	□□□□□ -1.5
MSI2-216	ENST00000582772	DNAJC3	Q13217	504 aa		5.65	□□□□□ -1.5
MSI2-216	ENST00000582772	RUNX3	Q13761	415 aa		5.65	□□□□□ -1.5
MSI2-216	ENST00000582772	CYP4A22	Q5TCH4	519 aa		5.65	□□□□□ -1.5
MSI2-216	ENST00000582772	TSHZ3	Q63HK5	1081 aa		5.65	□□□□□ -1.5
MSI2-216	ENST00000582772	TTBK2	Q6IQ55	1244 aa		5.65	□□□□□ -1.5
MSI2-216	ENST00000582772	PRSS55	Q6UWB4	352 aa	Predicted RBP	5.65	□□□□□ -1.5
MSI2-216	ENST00000582772	RGL4	Q8IZJ4	473 aa		5.65	□□□□□ -1.5
MSI2-216	ENST00000582772	BPIFB1	Q8TDL5	484 aa		5.65	□□□□□ -1.5
MSI2-216	ENST00000582772	HTR3C	Q8WXA8	447 aa		5.65	□□□□□ -1.5
MSI2-216	ENST00000582772	SEPT1	Q8WYJ6	367 aa		5.65	□□□□□ -1.5
MSI2-216	ENST00000582772	IGSF8	Q969P0	613 aa		5.65	□□□□□ -1.5
MSI2-216	ENST00000582772	DDX27	Q96GQ7	796 aa	Known RBP	5.65	□□□□□ -1.5
MSI2-216	ENST00000582772	DDRGK1	Q96HY6	314 aa		5.65	□□□□□ -1.5
MSI2-216	ENST00000582772	CNDP2	Q96KP4	475 aa	Known RBP	5.65	□□□□□ -1.5
MSI2-216	ENST00000582772	FAM193B	Q96PV7	902 aa	Predicted RBP	5.65	□□□□□ -1.5
MSI2-216	ENST00000582772	GSX1	Q9H4S2	264 aa	Predicted RBP	5.65	□□□□□ -1.5
MSI2-216	ENST00000582772	ZNF287	Q9HBT7	754 aa		5.65	□□□□□ -1.5
MSI2-216	ENST00000582772	ACSL6	Q9UKU0	697 aa		5.65	□□□□□ -1.5
MSI2-216	ENST00000582772	RPH3A	Q9Y2J0	694 aa	Predicted RBP	5.65	□□□□□ -1.5
MSI2-216	ENST00000582772	PCDHGA8	Q9Y5G5	932 aa		5.65	□□□□□ -1.5
MSI2-216	ENST00000582772	PCDHGA4	Q9Y5G9	962 aa		5.65	□□□□□ -1.5
MSI2-216	ENST00000582772	MYO18A	Q92614	2054 aa	Known RBP	5.65	□□□□□ -1.51
MSI2-216	ENST00000582772	PRKDC	P78527	4128 aa	Known RBP	5.64	□□□□□ -1.51
MSI2-216	ENST00000582772		F8W810	466 aa		5.64	□□□□□ -1.51
MSI2-216	ENST00000582772	MEIS1	O00470	390 aa		5.64	□□□□□ -1.51
MSI2-216	ENST00000582772	ADAM12	O43184	909 aa		5.64	□□□□□ -1.51
MSI2-216	ENST00000582772	ZNF217	O75362	1048 aa		5.64	□□□□□ -1.51
MSI2-216	ENST00000582772	LDOC1	O95751	146 aa	Predicted RBP	5.64	□□□□□ -1.51
MSI2-216	ENST00000582772	KLRC1	P26715	233 aa		5.64	□□□□□ -1.51
MSI2-216	ENST00000582772	AFF1	P51825	1210 aa	Known RBP	5.64	□□□□□ -1.51
MSI2-216	ENST00000582772	MLLT10	P55197	1068 aa		5.64	□□□□□ -1.51
MSI2-216	ENST00000582772	MRPS21	P82921	87 aa	Known RBP	5.64	□□□□□ -1.51
MSI2-216	ENST00000582772	GRIN1	Q05586	938 aa		5.64	□□□□□ -1.51
MSI2-216	ENST00000582772	PSMD5	Q16401	504 aa		5.64	□□□□□ -1.51
MSI2-216	ENST00000582772	BORA	Q6PGQ7	559 aa		5.64	□□□□□ -1.51
MSI2-216	ENST00000582772	KDM7A	Q6ZMT4	941 aa		5.64	□□□□□ -1.51
MSI2-216	ENST00000582772	DEFB119	Q8N690	84 aa		5.64	□□□□□ -1.51
MSI2-216	ENST00000582772	SAMD3	Q8N6K7	520 aa		5.64	□□□□□ -1.51
MSI2-216	ENST00000582772	GLIS1	Q8NBF1	620 aa		5.64	□□□□□ -1.51
MSI2-216	ENST00000582772	C1orf216	Q8TAB5	229 aa		5.64	□□□□□ -1.51
MSI2-216	ENST00000582772	C9orf43	Q8TAL5	461 aa	Predicted RBP	5.64	□□□□□ -1.51
MSI2-216	ENST00000582772	PDCD6IP	Q8WUM4	868 aa	Known RBP	5.64	□□□□□ -1.51
MSI2-216	ENST00000582772	CD101	Q93033	1021 aa		5.64	□□□□□ -1.51
MSI2-216	ENST00000582772	PGBD4	Q96DM1	585 aa		5.64	□□□□□ -1.51
MSI2-216	ENST00000582772	ARSG	Q96EG1	525 aa		5.64	□□□□□ -1.51
MSI2-216	ENST00000582772	TMEM87B	Q96K49	555 aa		5.64	□□□□□ -1.51
MSI2-216	ENST00000582772	PCYT2	Q99447	389 aa		5.64	□□□□□ -1.51
MSI2-216	ENST00000582772	DBNDD2	Q9BQY9	259 aa		5.64	□□□□□ -1.51
MSI2-216	ENST00000582772	ANTXR1	Q9H6X2	564 aa		5.64	□□□□□ -1.51
MSI2-216	ENST00000582772	ARMT1	Q9H993	441 aa		5.64	□□□□□ -1.51
MSI2-216	ENST00000582772	CASS4	Q9NQ75	786 aa		5.64	□□□□□ -1.51
MSI2-216	ENST00000582772	FAM105A	Q9NUU6	356 aa		5.64	□□□□□ -1.51
MSI2-216	ENST00000582772	ADAM28	Q9UKQ2	775 aa		5.64	□□□□□ -1.51
MSI2-216	ENST00000582772	PNMA8B	Q9ULN7	279 aa	Predicted RBP	5.64	□□□□□ -1.51
MSI2-216	ENST00000582772	CIZ1	Q9ULV3	898 aa	Predicted RBP	5.64	□□□□□ -1.51
MSI2-216	ENST00000582772	ZNF532	Q9HCE3	1301 aa		5.64	□□□□□ -1.51
MSI2-216	ENST00000582772	DIDO1	Q9BTC0	2240 aa	Known RBP	5.64	□□□□□ -1.51
MSI2-216	ENST00000582772		K7EQS6	105 aa		5.63	□□□□□ -1.51
MSI2-216	ENST00000582772	OPLAH	O14841	1288 aa		5.63	□□□□□ -1.51
MSI2-216	ENST00000582772	BCAT2	O15382	392 aa	Predicted RBP	5.63	□□□□□ -1.51
MSI2-216	ENST00000582772	NOBOX	O60393	691 aa		5.63	□□□□□ -1.51
MSI2-216	ENST00000582772	DFNA5	O60443	496 aa		5.63	□□□□□ -1.51
MSI2-216	ENST00000582772	USP12	O75317	370 aa		5.63	□□□□□ -1.51
MSI2-216	ENST00000582772	WNT1	P04628	370 aa		5.63	□□□□□ -1.51
MSI2-216	ENST00000582772	ACP1	P24666	158 aa		5.63	□□□□□ -1.51
MSI2-216	ENST00000582772	ITGA3	P26006	1051 aa		5.63	□□□□□ -1.51
MSI2-216	ENST00000582772	GJA4	P35212	333 aa		5.63	□□□□□ -1.51
MSI2-216	ENST00000582772	OR1G1	P47890	313 aa		5.63	□□□□□ -1.51
MSI2-216	ENST00000582772	SLC26A2	P50443	739 aa		5.63	□□□□□ -1.51
MSI2-216	ENST00000582772	MRPS9	P82933	396 aa	Known RBP	5.63	□□□□□ -1.51
MSI2-216	ENST00000582772	E2F1	Q01094	437 aa		5.63	□□□□□ -1.51
MSI2-216	ENST00000582772	MTX1	Q13505	466 aa		5.63	□□□□□ -1.51
MSI2-216	ENST00000582772	TEAD2	Q15562	447 aa		5.63	□□□□□ -1.51
MSI2-216	ENST00000582772	SLC9C2	Q5TAH2	1124 aa		5.63	□□□□□ -1.51
MSI2-216	ENST00000582772	PLPPR4	Q7Z2D5	763 aa		5.63	□□□□□ -1.51
MSI2-216	ENST00000582772	MRPL10	Q7Z7H8	261 aa	Known RBP	5.63	□□□□□ -1.51
MSI2-216	ENST00000582772	TGIF2LY	Q8IUE0	185 aa		5.63	□□□□□ -1.51
MSI2-216	ENST00000582772	PHC2	Q8IXK0	858 aa		5.63	□□□□□ -1.51
MSI2-216	ENST00000582772	ZNF444	Q8N0Y2	327 aa	Predicted RBP	5.63	□□□□□ -1.51
MSI2-216	ENST00000582772	CCDC82	Q8N4S0	544 aa		5.63	□□□□□ -1.51
MSI2-216	ENST00000582772	ZCCHC9	Q8N567	271 aa	Known RBP	5.63	□□□□□ -1.51
MSI2-216	ENST00000582772	SHKBP1	Q8TBC3	707 aa		5.63	□□□□□ -1.51
MSI2-216	ENST00000582772	SLC7A3	Q8WY07	619 aa		5.63	□□□□□ -1.51
MSI2-216	ENST00000582772	PRR11	Q96HE9	360 aa	Predicted RBP	5.63	□□□□□ -1.51
MSI2-216	ENST00000582772	DEPDC7	Q96QD5	511 aa		5.63	□□□□□ -1.51
MSI2-216	ENST00000582772	POLR3C	Q9BUI4	534 aa	Predicted RBP	5.63	□□□□□ -1.51
MSI2-216	ENST00000582772	COLEC11	Q9BWP8	271 aa		5.63	□□□□□ -1.51
MSI2-216	ENST00000582772	NIFK	Q9BYG3	293 aa	Known RBP	5.63	□□□□□ -1.51
MSI2-216	ENST00000582772	RSAD1	Q9HA92	442 aa		5.63	□□□□□ -1.51
MSI2-216	ENST00000582772	ANO2	Q9NQ90	1003 aa		5.63	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms