RNA–Protein interactions for RNA: ENST00000582240.5

PPP4R1-221, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-221ENST00000582240 TRIM49CP0CI26 452 aa22.27■■□□□ 1.16
PPP4R1-221ENST00000582240 SP100P23497 879 aaPredicted RBP22.27■■□□□ 1.16
PPP4R1-221ENST00000582240 CCNE1P24864 410 aa22.27■■□□□ 1.16
PPP4R1-221ENST00000582240 RPL13P26373 211 aaKnown RBP22.27■■□□□ 1.16
PPP4R1-221ENST00000582240 SLC8B1Q6J4K2 584 aa22.27■■□□□ 1.16
PPP4R1-221ENST00000582240 LRRC52Q8N7C0 313 aa22.27■■□□□ 1.16
PPP4R1-221ENST00000582240 TSG101Q99816 390 aa22.27■■□□□ 1.16
PPP4R1-221ENST00000582240 RTP3Q9BQQ7 232 aa22.27■■□□□ 1.16
PPP4R1-221ENST00000582240 MMRN2Q9H8L6 949 aa22.27■■□□□ 1.16
PPP4R1-221ENST00000582240 SFXN1Q9H9B4 322 aa22.27■■□□□ 1.16
PPP4R1-221ENST00000582240 CD320Q9NPF0 282 aa22.27■■□□□ 1.16
PPP4R1-221ENST00000582240 L1RE1Q9UN81 338 aa22.27■■□□□ 1.16
PPP4R1-221ENST00000582240 CTNND2Q9UQB3 1225 aa22.27■■□□□ 1.16
PPP4R1-221ENST00000582240 R3HCC1Q9Y3T6 440 aaKnown RBP22.27■■□□□ 1.16
PPP4R1-221ENST00000582240 SNX9Q9Y5X1 595 aa22.27■■□□□ 1.16
PPP4R1-221ENST00000582240 PHACTR2O75167 634 aa22.26■■□□□ 1.15
PPP4R1-221ENST00000582240 SEC24AO95486 1093 aa22.26■■□□□ 1.15
PPP4R1-221ENST00000582240 C4BPAP04003 597 aaKnown RBP22.26■■□□□ 1.15
PPP4R1-221ENST00000582240 PSMC2P35998 433 aaKnown RBP22.26■■□□□ 1.15
PPP4R1-221ENST00000582240 PNPLA4P41247 253 aa22.26■■□□□ 1.15
PPP4R1-221ENST00000582240 VAMP7P51809 220 aa22.26■■□□□ 1.15
PPP4R1-221ENST00000582240 MYL6P60660 151 aa22.26■■□□□ 1.15
PPP4R1-221ENST00000582240 BIRC3Q13489 604 aa22.26■■□□□ 1.15
PPP4R1-221ENST00000582240 EDRF1Q3B7T1 1238 aa22.26■■□□□ 1.15
PPP4R1-221ENST00000582240 TDRD10Q5VZ19 366 aaKnown RBP22.26■■□□□ 1.15
PPP4R1-221ENST00000582240 CES5AQ6NT32 575 aa22.26■■□□□ 1.15
PPP4R1-221ENST00000582240 RNF19BQ6ZMZ0 732 aa22.26■■□□□ 1.15
PPP4R1-221ENST00000582240 OSTM1Q86WC4 334 aa22.26■■□□□ 1.15
PPP4R1-221ENST00000582240 METTL23Q86XA0 190 aa22.26■■□□□ 1.15
PPP4R1-221ENST00000582240 NELFBQ8WX92 580 aa22.26■■□□□ 1.15
PPP4R1-221ENST00000582240 PGLYRP2Q96PD5 576 aa22.26■■□□□ 1.15
PPP4R1-221ENST00000582240 PLEKHA4Q9H4M7 779 aa22.26■■□□□ 1.15
PPP4R1-221ENST00000582240 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.26■■□□□ 1.154e-10■■■■■ 39.2
PPP4R1-221ENST00000582240 FAM50BQ9Y247 325 aa22.26■■□□□ 1.15
PPP4R1-221ENST00000582240 XIRP2A4UGR9 3374 aa22.25■■□□□ 1.15
PPP4R1-221ENST00000582240 CETN3O15182 167 aa22.25■■□□□ 1.15
PPP4R1-221ENST00000582240 CCL16O15467 120 aa22.25■■□□□ 1.15
PPP4R1-221ENST00000582240 HCRTO43612 131 aa22.25■■□□□ 1.15
PPP4R1-221ENST00000582240 ZMYND10O75800 440 aa22.25■■□□□ 1.15
PPP4R1-221ENST00000582240 CYP11A1P05108 521 aa22.25■■□□□ 1.15
PPP4R1-221ENST00000582240 C8AP07357 584 aa22.25■■□□□ 1.15
PPP4R1-221ENST00000582240 CPB1P15086 417 aa22.25■■□□□ 1.15
PPP4R1-221ENST00000582240 PAX3P23760 479 aa22.25■■□□□ 1.15
PPP4R1-221ENST00000582240 ITIH3Q06033 890 aa22.25■■□□□ 1.15
PPP4R1-221ENST00000582240 TRPC3Q13507 836 aa22.25■■□□□ 1.15
PPP4R1-221ENST00000582240 STIM1Q13586 685 aa22.25■■□□□ 1.15
PPP4R1-221ENST00000582240 GPR149Q86SP6 731 aa22.25■■□□□ 1.15
PPP4R1-221ENST00000582240 PDCL2Q8N4E4 241 aa22.25■■□□□ 1.15
PPP4R1-221ENST00000582240 OR10T2Q8NGX3 314 aa22.25■■□□□ 1.15
PPP4R1-221ENST00000582240 SLC7A14Q8TBB6 771 aa22.25■■□□□ 1.15
PPP4R1-221ENST00000582240 TMC2Q8TDI7 906 aa22.25■■□□□ 1.15
PPP4R1-221ENST00000582240 ZNF707Q96C28 371 aaPredicted RBP22.25■■□□□ 1.15
PPP4R1-221ENST00000582240 DHTKD1Q96HY7 919 aaPredicted RBP22.25■■□□□ 1.15
PPP4R1-221ENST00000582240 DUSP9Q99956 384 aaKnown RBP22.25■■□□□ 1.15
PPP4R1-221ENST00000582240 NUP62CLQ9H1M0 184 aa22.25■■□□□ 1.15
PPP4R1-221ENST00000582240 POMKQ9H5K3 350 aa22.25■■□□□ 1.15
PPP4R1-221ENST00000582240 PSMA7O14818 248 aa22.24■■□□□ 1.15
PPP4R1-221ENST00000582240 HUS1O60921 280 aa22.24■■□□□ 1.15
PPP4R1-221ENST00000582240 ABLIM3O94929 683 aa22.24■■□□□ 1.15
PPP4R1-221ENST00000582240 VNN1O95497 513 aa22.24■■□□□ 1.15
PPP4R1-221ENST00000582240 VNN2O95498 520 aa22.24■■□□□ 1.15
PPP4R1-221ENST00000582240 KRT13P13646 458 aa22.24■■□□□ 1.15
PPP4R1-221ENST00000582240 GCLMP48507 274 aa22.24■■□□□ 1.15
PPP4R1-221ENST00000582240 CBX2Q14781 532 aaPredicted RBP22.24■■□□□ 1.15
PPP4R1-221ENST00000582240 PPM1LQ5SGD2 360 aa22.24■■□□□ 1.15
PPP4R1-221ENST00000582240 ATAT1Q5SQI0 421 aa22.24■■□□□ 1.15
PPP4R1-221ENST00000582240 LIN9Q5TKA1 542 aa22.24■■□□□ 1.15
PPP4R1-221ENST00000582240 ZNF461Q8TAF7 563 aa22.24■■□□□ 1.15
PPP4R1-221ENST00000582240 HDAC7Q8WUI4 952 aa22.24■■□□□ 1.15
PPP4R1-221ENST00000582240 SMG7Q92540 1137 aaKnown RBP22.24■■□□□ 1.15
PPP4R1-221ENST00000582240 RPGRIP1Q96KN7 1286 aa22.24■■□□□ 1.15
PPP4R1-221ENST00000582240 GTPBP4Q9BZE4 634 aaKnown RBP22.24■■□□□ 1.15
PPP4R1-221ENST00000582240 CYP4F11Q9HBI6 524 aa22.24■■□□□ 1.15
PPP4R1-221ENST00000582240 POLIQ9UNA4 740 aa22.24■■□□□ 1.15
PPP4R1-221ENST00000582240 UNC80Q8N2C7 3258 aa22.24■■□□□ 1.15
PPP4R1-221ENST00000582240 GOLGA6L22H0YM25 854 aa22.23■■□□□ 1.15
PPP4R1-221ENST00000582240 DLL1O00548 723 aa22.23■■□□□ 1.15
PPP4R1-221ENST00000582240 MAPK13O15264 365 aa22.23■■□□□ 1.15
PPP4R1-221ENST00000582240 CLSTN1O94985 981 aa22.23■■□□□ 1.15
PPP4R1-221ENST00000582240 ACAT1P24752 427 aaKnown RBP22.23■■□□□ 1.15
PPP4R1-221ENST00000582240 CLDN10P78369 228 aa22.23■■□□□ 1.15
PPP4R1-221ENST00000582240 PPP3CAQ08209 521 aa22.23■■□□□ 1.15
PPP4R1-221ENST00000582240 ADCY1Q08828 1119 aa22.23■■□□□ 1.15
PPP4R1-221ENST00000582240 MYO1EQ12965 1108 aa22.23■■□□□ 1.15
PPP4R1-221ENST00000582240 RIPOR3Q96MK2 946 aa22.23■■□□□ 1.15
PPP4R1-221ENST00000582240 PIDD1Q9HB75 910 aa22.23■■□□□ 1.15
PPP4R1-221ENST00000582240 GDAP2Q9NXN4 497 aa22.23■■□□□ 1.15
PPP4R1-221ENST00000582240 DSEQ9UL01 958 aa22.23■■□□□ 1.15
PPP4R1-221ENST00000582240 OR6C75A6NL08 312 aa22.22■■□□□ 1.15
PPP4R1-221ENST00000582240 C1RP00736 705 aa22.22■■□□□ 1.15
PPP4R1-221ENST00000582240 EPB41P11171 864 aaKnown RBP22.22■■□□□ 1.15
PPP4R1-221ENST00000582240 ELF1P32519 619 aa22.22■■□□□ 1.15
PPP4R1-221ENST00000582240 MTHFRP42898 656 aa22.22■■□□□ 1.15
PPP4R1-221ENST00000582240 NTHL1P78549 312 aa22.22■■□□□ 1.15
PPP4R1-221ENST00000582240 FKBP3Q00688 224 aaKnown RBP22.22■■□□□ 1.15
PPP4R1-221ENST00000582240 ZP2Q05996 745 aa22.22■■□□□ 1.15
PPP4R1-221ENST00000582240 SOWAHAQ2M3V2 549 aa22.22■■□□□ 1.15
PPP4R1-221ENST00000582240 TTI2Q6NXR4 508 aa22.22■■□□□ 1.15
PPP4R1-221ENST00000582240 ELMSAN1Q6PJG2 1045 aa22.22■■□□□ 1.15
PPP4R1-221ENST00000582240 INTS8Q75QN2 995 aaKnown RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms