RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 ACRP10323 421 aa9.91□□□□□ -0.82
SS18-220ENST00000582092 DARSP14868 501 aaKnown RBP9.91□□□□□ -0.82
SS18-220ENST00000582092 ATF7P17544 494 aaPredicted RBP9.91□□□□□ -0.82
SS18-220ENST00000582092 CD58P19256 250 aa9.91□□□□□ -0.82
SS18-220ENST00000582092 EIF4BP23588 611 aaKnown RBP9.91□□□□□ -0.82
SS18-220ENST00000582092 GRM5P41594 1212 aa9.91□□□□□ -0.82
SS18-220ENST00000582092 CRYBB1P53674 252 aaPredicted RBP9.91□□□□□ -0.82
SS18-220ENST00000582092 TNNC1P63316 161 aa9.91□□□□□ -0.82
SS18-220ENST00000582092 AMPD2Q01433 879 aa9.91□□□□□ -0.82
SS18-220ENST00000582092 MEI1Q5TIA1 1274 aa9.91□□□□□ -0.82
SS18-220ENST00000582092 JADE1Q6IE81 842 aa9.91□□□□□ -0.82
SS18-220ENST00000582092 SPOPLQ6IQ16 392 aa9.91□□□□□ -0.82
SS18-220ENST00000582092 GDF6Q6KF10 455 aaPredicted RBP9.91□□□□□ -0.82
SS18-220ENST00000582092 TMCO3Q6UWJ1 677 aa9.91□□□□□ -0.82
SS18-220ENST00000582092 RBBP8NLQ8NC74 664 aaPredicted RBP9.91□□□□□ -0.82
SS18-220ENST00000582092 MSANTD4Q8NCY6 345 aa9.91□□□□□ -0.82
SS18-220ENST00000582092 BEST2Q8NFU1 509 aa9.91□□□□□ -0.82
SS18-220ENST00000582092 HERVK_113Q902F9 699 aa9.91□□□□□ -0.82
SS18-220ENST00000582092 KIF12Q96FN5 646 aa9.91□□□□□ -0.82
SS18-220ENST00000582092 OSMRQ99650 979 aa9.91□□□□□ -0.82
SS18-220ENST00000582092 ISCUQ9H1K1 167 aa9.91□□□□□ -0.82
SS18-220ENST00000582092 ADAMTS10Q9H324 1103 aa9.91□□□□□ -0.82
SS18-220ENST00000582092 PLEKHA5Q9HAU0 1116 aa9.91□□□□□ -0.82
SS18-220ENST00000582092 PARP2Q9UGN5 583 aa9.91□□□□□ -0.82
SS18-220ENST00000582092 MSRAQ9UJ68 235 aa9.91□□□□□ -0.82
SS18-220ENST00000582092 PCDHGC5Q9Y5F6 944 aa9.91□□□□□ -0.82
SS18-220ENST00000582092 SLC4A7Q9Y6M7 1214 aa9.91□□□□□ -0.82
SS18-220ENST00000582092 SIP14410 1827 aa9.91□□□□□ -0.82
SS18-220ENST00000582092 NCANO14594 1321 aa9.9□□□□□ -0.82
SS18-220ENST00000582092 MBLAC1A4D2B0 266 aaPredicted RBP9.9□□□□□ -0.82
SS18-220ENST00000582092 GRID2IPA4D2P6 1211 aa9.9□□□□□ -0.82
SS18-220ENST00000582092 ZBBXA8MT70 800 aa9.9□□□□□ -0.82
SS18-220ENST00000582092 KCNK3O14649 394 aa9.9□□□□□ -0.82
SS18-220ENST00000582092 FANCGO15287 622 aa9.9□□□□□ -0.82
SS18-220ENST00000582092 TREHO43280 583 aa9.9□□□□□ -0.82
SS18-220ENST00000582092 NCK2O43639 380 aa9.9□□□□□ -0.82
SS18-220ENST00000582092 CEP104O60308 925 aa9.9□□□□□ -0.82
SS18-220ENST00000582092 EFCAB14O75071 495 aa9.9□□□□□ -0.82
SS18-220ENST00000582092 ASS1P00966 412 aaKnown RBP9.9□□□□□ -0.82
SS18-220ENST00000582092 CST3P01034 146 aaPredicted RBP9.9□□□□□ -0.82
SS18-220ENST00000582092 RHOXF2BP0C7M4 288 aa9.9□□□□□ -0.82
SS18-220ENST00000582092 IQCF3P0C7M6 154 aa9.9□□□□□ -0.82
SS18-220ENST00000582092 CD19P15391 556 aa9.9□□□□□ -0.82
SS18-220ENST00000582092 SELPP16109 830 aa9.9□□□□□ -0.82
SS18-220ENST00000582092 FGFR4P22455 802 aa9.9□□□□□ -0.82
SS18-220ENST00000582092 NAA30Q147X3 362 aaPredicted RBP9.9□□□□□ -0.82
SS18-220ENST00000582092 RAB30Q15771 203 aa9.9□□□□□ -0.82
SS18-220ENST00000582092 CLEC16AQ2KHT3 1053 aa9.9□□□□□ -0.82
SS18-220ENST00000582092 WDR72Q3MJ13 1102 aa9.9□□□□□ -0.82
SS18-220ENST00000582092 DEFB128Q7Z7B8 93 aa9.9□□□□□ -0.82
SS18-220ENST00000582092 ANKRD7Q92527 254 aa9.9□□□□□ -0.82
SS18-220ENST00000582092 SCLYQ96I15 445 aa9.9□□□□□ -0.82
SS18-220ENST00000582092 FAXDC2Q96IV6 333 aa9.9□□□□□ -0.82
SS18-220ENST00000582092 TSPAN18Q96SJ8 248 aa9.9□□□□□ -0.82
SS18-220ENST00000582092 MMS19Q96T76 1030 aa9.9□□□□□ -0.82
SS18-220ENST00000582092 PSMB7Q99436 277 aa9.9□□□□□ -0.82
SS18-220ENST00000582092 NAP1L3Q99457 506 aaPredicted RBP9.9□□□□□ -0.82
SS18-220ENST00000582092 RHOXF2Q9BQY4 288 aa9.9□□□□□ -0.82
SS18-220ENST00000582092 APOL6Q9BWW8 343 aa9.9□□□□□ -0.82
SS18-220ENST00000582092 PLVAPQ9BX97 442 aa9.9□□□□□ -0.82
SS18-220ENST00000582092 THAP2Q9H0W7 228 aa9.9□□□□□ -0.82
SS18-220ENST00000582092 WNT8AQ9H1J5 351 aa9.9□□□□□ -0.82
SS18-220ENST00000582092 MRPL47Q9HD33 250 aaKnown RBP9.9□□□□□ -0.82
SS18-220ENST00000582092 DPP3Q9NY33 737 aa9.9□□□□□ -0.82
SS18-220ENST00000582092 UVRAGQ9P2Y5 699 aa9.9□□□□□ -0.82
SS18-220ENST00000582092 NOCTQ9UK39 431 aaKnown RBP9.9□□□□□ -0.82
SS18-220ENST00000582092 ITGA11Q9UKX5 1188 aa9.9□□□□□ -0.82
SS18-220ENST00000582092 AGAP1Q9UPQ3 857 aa9.9□□□□□ -0.82
SS18-220ENST00000582092 PIN4Q9Y237 131 aaKnown RBP9.9□□□□□ -0.82
SS18-220ENST00000582092 DERAQ9Y315 318 aa9.9□□□□□ -0.82
SS18-220ENST00000582092 NUB1Q9Y5A7 615 aa9.9□□□□□ -0.82
SS18-220ENST00000582092 TET1Q8NFU7 2136 aa9.89□□□□□ -0.83
SS18-220ENST00000582092 GBF1Q92538 1859 aa9.89□□□□□ -0.83
SS18-220ENST00000582092 PTPRJQ12913 1337 aa9.89□□□□□ -0.83
SS18-220ENST00000582092 UMODL1Q5DID0 1318 aa9.89□□□□□ -0.83
SS18-220ENST00000582092 MIF4GDA9UHW6 222 aaKnown RBP9.89□□□□□ -0.83
SS18-220ENST00000582092 ABLIM1O14639 778 aa9.89□□□□□ -0.83
SS18-220ENST00000582092 SPOPO43791 374 aa9.89□□□□□ -0.83
SS18-220ENST00000582092 CAND2O75155 1236 aa9.89□□□□□ -0.83
SS18-220ENST00000582092 GPR32O75388 356 aa9.89□□□□□ -0.83
SS18-220ENST00000582092 BAIAP3O94812 1187 aa9.89□□□□□ -0.83
SS18-220ENST00000582092 KIF4AO95239 1232 aa9.89□□□□□ -0.83
SS18-220ENST00000582092 ITGB3P05106 788 aa9.89□□□□□ -0.83
SS18-220ENST00000582092 ZSCAN20P17040 1043 aaPredicted RBP9.89□□□□□ -0.83
SS18-220ENST00000582092 CHRNB2P17787 502 aa9.89□□□□□ -0.83
SS18-220ENST00000582092 CXCR5P32302 372 aa9.89□□□□□ -0.83
SS18-220ENST00000582092 EPHB4P54760 987 aa9.89□□□□□ -0.83
SS18-220ENST00000582092 WNT7BP56706 349 aa9.89□□□□□ -0.83
SS18-220ENST00000582092 FMO1Q01740 532 aa9.89□□□□□ -0.83
SS18-220ENST00000582092 MESDQ14696 234 aa9.89□□□□□ -0.83
SS18-220ENST00000582092 AMHR2Q16671 573 aa9.89□□□□□ -0.83
SS18-220ENST00000582092 MAP9Q49MG5 647 aa9.89□□□□□ -0.83
SS18-220ENST00000582092 TWF2Q6IBS0 349 aaKnown RBP9.89□□□□□ -0.83
SS18-220ENST00000582092 SCARA5Q6ZMJ2 495 aa9.89□□□□□ -0.83
SS18-220ENST00000582092 RUFY4Q6ZNE9 571 aa9.89□□□□□ -0.83
SS18-220ENST00000582092 LRRC8DQ7L1W4 858 aa9.89□□□□□ -0.83
SS18-220ENST00000582092 RSRC2Q7L4I2 434 aaKnown RBP9.89□□□□□ -0.83
SS18-220ENST00000582092 OTOP2Q7RTS6 562 aa9.89□□□□□ -0.83
SS18-220ENST00000582092 CEP120Q8N960 986 aa9.89□□□□□ -0.83
SS18-220ENST00000582092 TMEM35BQ8NCS4 154 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms