RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 HOXA2O43364 376 aa14.8□□□□□ -0.04
CDK5RAP3-219ENST00000580670 IPO7O95373 1038 aaKnown RBP14.8□□□□□ -0.04
CDK5RAP3-219ENST00000580670 CYP11B1P15538 503 aa14.8□□□□□ -0.04
CDK5RAP3-219ENST00000580670 PDE6CP51160 858 aa14.8□□□□□ -0.04
CDK5RAP3-219ENST00000580670 BPIFB4P59827 614 aa14.8□□□□□ -0.04
CDK5RAP3-219ENST00000580670 LILRA4P59901 499 aa14.8□□□□□ -0.04
CDK5RAP3-219ENST00000580670 RNASELQ05823 741 aaKnown RBP14.8□□□□□ -0.04
CDK5RAP3-219ENST00000580670 NOP9Q86U38 636 aaKnown RBP14.8□□□□□ -0.04
CDK5RAP3-219ENST00000580670 C7orf61Q8IZ16 206 aa14.8□□□□□ -0.04
CDK5RAP3-219ENST00000580670 CRIPAKQ8N1N5 446 aa14.8□□□□□ -0.04
CDK5RAP3-219ENST00000580670 EPS8L1Q8TE68 723 aa14.8□□□□□ -0.04
CDK5RAP3-219ENST00000580670 SLC20A1Q8WUM9 679 aa14.8□□□□□ -0.04
CDK5RAP3-219ENST00000580670 RABGGTAQ92696 567 aa14.8□□□□□ -0.04
CDK5RAP3-219ENST00000580670 DDX27Q96GQ7 796 aaKnown RBP14.8□□□□□ -0.04
CDK5RAP3-219ENST00000580670 EIF3CQ99613 913 aaKnown RBP14.8□□□□□ -0.04
CDK5RAP3-219ENST00000580670 TBC1D13Q9NVG8 400 aa14.8□□□□□ -0.04
CDK5RAP3-219ENST00000580670 TRMT1Q9NXH9 659 aaKnown RBP14.8□□□□□ -0.04
CDK5RAP3-219ENST00000580670 ADAMTS1Q9UHI8 967 aa14.8□□□□□ -0.04
CDK5RAP3-219ENST00000580670 ADGRG1Q9Y653 693 aa14.8□□□□□ -0.04
CDK5RAP3-219ENST00000580670 MKI67P46013 3256 aaKnown RBP14.8□□□□□ -0.04
CDK5RAP3-219ENST00000580670 ABHD14A-ACY1A0A1B0GW23 586 aa14.79□□□□□ -0.04
CDK5RAP3-219ENST00000580670 CALCAP01258 141 aa14.79□□□□□ -0.04
CDK5RAP3-219ENST00000580670 PFKMP08237 780 aa14.79□□□□□ -0.04
CDK5RAP3-219ENST00000580670 CCDC175P0C221 793 aa14.79□□□□□ -0.04
CDK5RAP3-219ENST00000580670 ACRP10323 421 aa14.79□□□□□ -0.04
CDK5RAP3-219ENST00000580670 ANXA13P27216 316 aa14.79□□□□□ -0.04
CDK5RAP3-219ENST00000580670 GATMP50440 423 aa14.79□□□□□ -0.04
CDK5RAP3-219ENST00000580670 GFPT1Q06210 699 aaPredicted RBP14.79□□□□□ -0.04
CDK5RAP3-219ENST00000580670 DMTNQ08495 405 aa14.79□□□□□ -0.04
CDK5RAP3-219ENST00000580670 SPA17Q15506 151 aa14.79□□□□□ -0.04
CDK5RAP3-219ENST00000580670 UPP1Q16831 310 aa14.79□□□□□ -0.04
CDK5RAP3-219ENST00000580670 CCAR2Q8N163 923 aaKnown RBP14.79□□□□□ -0.04
CDK5RAP3-219ENST00000580670 ANKRD7Q92527 254 aa14.79□□□□□ -0.04
CDK5RAP3-219ENST00000580670 UROC1Q96N76 676 aa14.79□□□□□ -0.04
CDK5RAP3-219ENST00000580670 AGPAT1Q99943 283 aa14.79□□□□□ -0.04
CDK5RAP3-219ENST00000580670 PAAF1Q9BRP4 392 aa14.79□□□□□ -0.04
CDK5RAP3-219ENST00000580670 SYT11Q9BT88 431 aa14.79□□□□□ -0.04
CDK5RAP3-219ENST00000580670 GDAP2Q9NXN4 497 aa14.79□□□□□ -0.04
CDK5RAP3-219ENST00000580670 PPP2R2CQ9Y2T4 447 aa14.79□□□□□ -0.04
CDK5RAP3-219ENST00000580670 A0A087X0T9 212 aa14.78□□□□□ -0.04
CDK5RAP3-219ENST00000580670 UPP2O95045 317 aa14.78□□□□□ -0.04
CDK5RAP3-219ENST00000580670 FAM228BP0C875 321 aa14.78□□□□□ -0.04
CDK5RAP3-219ENST00000580670 TNFAIP3P21580 790 aa14.78□□□□□ -0.04
CDK5RAP3-219ENST00000580670 IGFBP6P24592 240 aaPredicted RBP14.78□□□□□ -0.04
CDK5RAP3-219ENST00000580670 ZNF132P52740 706 aa14.78□□□□□ -0.04
CDK5RAP3-219ENST00000580670 KRT83P78385 493 aa14.78□□□□□ -0.04
CDK5RAP3-219ENST00000580670 CYP27A1Q02318 531 aa14.78□□□□□ -0.04
CDK5RAP3-219ENST00000580670 BMS1Q14692 1282 aaKnown RBP14.78□□□□□ -0.04
CDK5RAP3-219ENST00000580670 SLC18A3Q16572 532 aa14.78□□□□□ -0.04
CDK5RAP3-219ENST00000580670 ZNF394Q53GI3 561 aa14.78□□□□□ -0.04
CDK5RAP3-219ENST00000580670 TAF3Q5VWG9 929 aa14.78□□□□□ -0.04
CDK5RAP3-219ENST00000580670 SMYD5Q6GMV2 418 aa14.78□□□□□ -0.04
CDK5RAP3-219ENST00000580670 ZNF280BQ86YH2 543 aa14.78□□□□□ -0.04
CDK5RAP3-219ENST00000580670 CASD1Q96PB1 797 aa14.78□□□□□ -0.04
CDK5RAP3-219ENST00000580670 FAM193BQ96PV7 902 aaPredicted RBP14.78□□□□□ -0.04
CDK5RAP3-219ENST00000580670 IL23AQ9NPF7 189 aa14.78□□□□□ -0.04
CDK5RAP3-219ENST00000580670 SEPT11Q9NVA2 429 aaKnown RBP14.78□□□□□ -0.04
CDK5RAP3-219ENST00000580670 NOCTQ9UK39 431 aaKnown RBP14.78□□□□□ -0.04
CDK5RAP3-219ENST00000580670 REXO2Q9Y3B8 237 aaKnown RBP14.78□□□□□ -0.04
CDK5RAP3-219ENST00000580670 USP27XA6NNY8 438 aa14.78□□□□□ -0.04
CDK5RAP3-219ENST00000580670 DDX3XO00571 662 aaKnown RBP eCLIP14.78□□□□□ -0.04
CDK5RAP3-219ENST00000580670 ZNF263O14978 683 aa14.78□□□□□ -0.04
CDK5RAP3-219ENST00000580670 CCP110O43303 1012 aa14.78□□□□□ -0.04
CDK5RAP3-219ENST00000580670 ZSCAN12O43309 604 aa14.78□□□□□ -0.04
CDK5RAP3-219ENST00000580670 EFCAB14O75071 495 aa14.78□□□□□ -0.04
CDK5RAP3-219ENST00000580670 DDHD2O94830 711 aa14.78□□□□□ -0.04
CDK5RAP3-219ENST00000580670 LCA5LO95447 670 aa14.78□□□□□ -0.04
CDK5RAP3-219ENST00000580670 DSC1Q08554 894 aa14.78□□□□□ -0.04
CDK5RAP3-219ENST00000580670 SOWAHAQ2M3V2 549 aa14.78□□□□□ -0.04
CDK5RAP3-219ENST00000580670 GLYCTKQ8IVS8 523 aa14.78□□□□□ -0.04
CDK5RAP3-219ENST00000580670 TTC39CQ8N584 583 aa14.78□□□□□ -0.04
CDK5RAP3-219ENST00000580670 C3orf58Q8NDZ4 430 aa14.78□□□□□ -0.04
CDK5RAP3-219ENST00000580670 OLIG1Q8TAK6 271 aa14.78□□□□□ -0.04
CDK5RAP3-219ENST00000580670 LNX1Q8TBB1 728 aaPredicted RBP14.78□□□□□ -0.04
CDK5RAP3-219ENST00000580670 BADQ92934 168 aa14.78□□□□□ -0.04
CDK5RAP3-219ENST00000580670 MRPL45Q9BRJ2 306 aaKnown RBP14.78□□□□□ -0.04
CDK5RAP3-219ENST00000580670 FAM124BQ9H5Z6 455 aaPredicted RBP14.78□□□□□ -0.04
CDK5RAP3-219ENST00000580670 PUF60Q9UHX1 559 aaKnown RBP14.78□□□□□ -0.04
CDK5RAP3-219ENST00000580670 BARX2Q9UMQ3 279 aaPredicted RBP14.78□□□□□ -0.04
CDK5RAP3-219ENST00000580670 LTBP2Q14767 1821 aa14.77□□□□□ -0.05
CDK5RAP3-219ENST00000580670 TBKBP1A7MCY6 615 aa14.77□□□□□ -0.05
CDK5RAP3-219ENST00000580670 CYB561D2O14569 222 aa14.77□□□□□ -0.05
CDK5RAP3-219ENST00000580670 B4GALT3O60512 393 aa14.77□□□□□ -0.05
CDK5RAP3-219ENST00000580670 HUS1O60921 280 aa14.77□□□□□ -0.05
CDK5RAP3-219ENST00000580670 CILPO75339 1184 aa14.77□□□□□ -0.05
CDK5RAP3-219ENST00000580670 B3GAT3O94766 335 aa14.77□□□□□ -0.05
CDK5RAP3-219ENST00000580670 AMHP03971 560 aa14.77□□□□□ -0.05
CDK5RAP3-219ENST00000580670 MMEP08473 750 aa14.77□□□□□ -0.05
CDK5RAP3-219ENST00000580670 CHRNB2P17787 502 aa14.77□□□□□ -0.05
CDK5RAP3-219ENST00000580670 GNA15P30679 374 aa14.77□□□□□ -0.05
CDK5RAP3-219ENST00000580670 INCA1Q0VD86 236 aa14.77□□□□□ -0.05
CDK5RAP3-219ENST00000580670 PPIGQ13427 754 aaKnown RBP eCLIP14.77□□□□□ -0.058e-9■■■■□ 23.2
CDK5RAP3-219ENST00000580670 COLGALT2Q8IYK4 626 aa14.77□□□□□ -0.05
CDK5RAP3-219ENST00000580670 APPL2Q8NEU8 664 aa14.77□□□□□ -0.05
CDK5RAP3-219ENST00000580670 WHAMMQ8TF30 809 aa14.77□□□□□ -0.05
CDK5RAP3-219ENST00000580670 DDX1Q92499 740 aaKnown RBP14.77□□□□□ -0.05
CDK5RAP3-219ENST00000580670 ABHD8Q96I13 439 aa14.77□□□□□ -0.05
CDK5RAP3-219ENST00000580670 HTATIP2Q9BUP3 242 aa14.77□□□□□ -0.05
CDK5RAP3-219ENST00000580670 KCND1Q9NSA2 647 aa14.77□□□□□ -0.05
CDK5RAP3-219ENST00000580670 HMGXB4Q9UGU5 601 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms