RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 UPK3BL1B0FP48 263 aa8.48□□□□□ -1.05
SMARCE1-217ENST00000580654 UPK3BL2E5RIL1 263 aa8.48□□□□□ -1.05
SMARCE1-217ENST00000580654 TBX3O15119 743 aa8.48□□□□□ -1.05
SMARCE1-217ENST00000580654 SGSM2O43147 1006 aa8.48□□□□□ -1.05
SMARCE1-217ENST00000580654 RECQL4O94761 1208 aa8.48□□□□□ -1.05
SMARCE1-217ENST00000580654 B3GAT3O94766 335 aa8.48□□□□□ -1.05
SMARCE1-217ENST00000580654 VNN2O95498 520 aa8.48□□□□□ -1.05
SMARCE1-217ENST00000580654 PRAMEF12O95522 483 aa8.48□□□□□ -1.05
SMARCE1-217ENST00000580654 GBP1P32455 592 aa8.48□□□□□ -1.05
SMARCE1-217ENST00000580654 SLC19A1P41440 591 aa8.48□□□□□ -1.05
SMARCE1-217ENST00000580654 MAPK8P45983 427 aa8.48□□□□□ -1.05
SMARCE1-217ENST00000580654 QARSP47897 775 aaKnown RBP8.48□□□□□ -1.05
SMARCE1-217ENST00000580654 USP11P51784 963 aa8.48□□□□□ -1.05
SMARCE1-217ENST00000580654 ARPP19P56211 112 aa8.48□□□□□ -1.05
SMARCE1-217ENST00000580654 POU5F1BQ06416 359 aa8.48□□□□□ -1.05
SMARCE1-217ENST00000580654 MRPL58Q14197 206 aaKnown RBP8.48□□□□□ -1.05
SMARCE1-217ENST00000580654 UPP1Q16831 310 aa8.48□□□□□ -1.05
SMARCE1-217ENST00000580654 TRIM61Q5EBN2 209 aa8.48□□□□□ -1.05
SMARCE1-217ENST00000580654 NAIF1Q69YI7 327 aaPredicted RBP8.48□□□□□ -1.05
SMARCE1-217ENST00000580654 IQCEQ6IPM2 695 aa8.48□□□□□ -1.05
SMARCE1-217ENST00000580654 CCNI2Q6ZMN8 369 aaPredicted RBP8.48□□□□□ -1.05
SMARCE1-217ENST00000580654 CYP2U1Q7Z449 544 aa8.48□□□□□ -1.05
SMARCE1-217ENST00000580654 LEMD2Q8NC56 503 aa8.48□□□□□ -1.05
SMARCE1-217ENST00000580654 PIGKQ92643 395 aa8.48□□□□□ -1.05
SMARCE1-217ENST00000580654 ZNF512Q96ME7 567 aaPredicted RBP8.48□□□□□ -1.05
SMARCE1-217ENST00000580654 DNAJC25Q9H1X3 360 aa8.48□□□□□ -1.05
SMARCE1-217ENST00000580654 SLITRK6Q9H5Y7 841 aa8.48□□□□□ -1.05
SMARCE1-217ENST00000580654 GOLGA2P5Q9HBQ8 144 aa8.48□□□□□ -1.05
SMARCE1-217ENST00000580654 ASAH2Q9NR71 780 aa8.48□□□□□ -1.05
SMARCE1-217ENST00000580654 TMEM74BQ9NUR3 256 aa8.48□□□□□ -1.05
SMARCE1-217ENST00000580654 MBD1Q9UIS9 605 aaPredicted RBP8.48□□□□□ -1.05
SMARCE1-217ENST00000580654 FBXL5Q9UKA1 691 aa8.48□□□□□ -1.05
SMARCE1-217ENST00000580654 VAV3Q9UKW4 847 aa8.48□□□□□ -1.05
SMARCE1-217ENST00000580654 PPME1Q9Y570 386 aa8.48□□□□□ -1.05
SMARCE1-217ENST00000580654 CEP192Q8TEP8 1941 aa8.48□□□□□ -1.05
SMARCE1-217ENST00000580654 PIEZO2Q9H5I5 2752 aa8.48□□□□□ -1.05
SMARCE1-217ENST00000580654 ASXL3Q9C0F0 2248 aa8.48□□□□□ -1.05
SMARCE1-217ENST00000580654 APC2O95996 2303 aa8.47□□□□□ -1.05
SMARCE1-217ENST00000580654 DENND4CQ5VZ89 1909 aa8.47□□□□□ -1.05
SMARCE1-217ENST00000580654 PLXND1Q9Y4D7 1925 aa8.47□□□□□ -1.05
SMARCE1-217ENST00000580654 CYP3A7-CYP3A51PA0A087WV96 503 aa8.47□□□□□ -1.05
SMARCE1-217ENST00000580654 SMAPO00193 183 aa8.47□□□□□ -1.05
SMARCE1-217ENST00000580654 TRDMT1O14717 391 aaKnown RBP8.47□□□□□ -1.05
SMARCE1-217ENST00000580654 ZBTB43O43298 467 aa8.47□□□□□ -1.05
SMARCE1-217ENST00000580654 EIF5BO60841 1220 aaKnown RBP8.47□□□□□ -1.05
SMARCE1-217ENST00000580654 APBB3O95704 486 aa8.47□□□□□ -1.05
SMARCE1-217ENST00000580654 ENGP17813 658 aa8.47□□□□□ -1.05
SMARCE1-217ENST00000580654 GLRA2P23416 452 aa8.47□□□□□ -1.05
SMARCE1-217ENST00000580654 CYP3A7P24462 503 aa8.47□□□□□ -1.05
SMARCE1-217ENST00000580654 ARL2P36404 184 aa8.47□□□□□ -1.05
SMARCE1-217ENST00000580654 SOX4Q06945 474 aaPredicted RBP8.47□□□□□ -1.05
SMARCE1-217ENST00000580654 NCBP1Q09161 790 aaKnown RBP8.47□□□□□ -1.05
SMARCE1-217ENST00000580654 MXD4Q14582 209 aaPredicted RBP8.47□□□□□ -1.05
SMARCE1-217ENST00000580654 ZNF423Q2M1K9 1284 aa8.47□□□□□ -1.05
SMARCE1-217ENST00000580654 ITPRIPL2Q3MIP1 535 aa8.47□□□□□ -1.05
SMARCE1-217ENST00000580654 GLRA4Q5JXX5 417 aa8.47□□□□□ -1.05
SMARCE1-217ENST00000580654 SYT13Q7L8C5 426 aa8.47□□□□□ -1.05
SMARCE1-217ENST00000580654 EXOC8Q8IYI6 725 aa8.47□□□□□ -1.05
SMARCE1-217ENST00000580654 ELMOD1Q8N336 334 aa8.47□□□□□ -1.05
SMARCE1-217ENST00000580654 TCEANC2Q96MN5 208 aa8.47□□□□□ -1.05
SMARCE1-217ENST00000580654 PPP1R10Q96QC0 940 aaKnown RBP8.47□□□□□ -1.05
SMARCE1-217ENST00000580654 NFKBIZQ9BYH8 718 aa8.47□□□□□ -1.05
SMARCE1-217ENST00000580654 TPSD1Q9BZJ3 242 aa8.47□□□□□ -1.05
SMARCE1-217ENST00000580654 CRISPLD1Q9H336 500 aa8.47□□□□□ -1.05
SMARCE1-217ENST00000580654 PDZD7Q9H5P4 517 aa8.47□□□□□ -1.05
SMARCE1-217ENST00000580654 HPS4Q9NQG7 708 aa8.47□□□□□ -1.05
SMARCE1-217ENST00000580654 FSCN3Q9NQT6 498 aa8.47□□□□□ -1.05
SMARCE1-217ENST00000580654 OBP2AQ9NY56 170 aa8.47□□□□□ -1.05
SMARCE1-217ENST00000580654 RAI2Q9Y5P3 530 aa8.47□□□□□ -1.05
SMARCE1-217ENST00000580654 HELZP42694 1942 aaKnown RBP8.46□□□□□ -1.05
SMARCE1-217ENST00000580654 ANTXRLA6NF34 631 aa8.46□□□□□ -1.06
SMARCE1-217ENST00000580654 GOLGA8AA7E2F4 631 aa8.46□□□□□ -1.06
SMARCE1-217ENST00000580654 GOLGA8BA8MQT2 603 aa8.46□□□□□ -1.06
SMARCE1-217ENST00000580654 SLC27A2O14975 620 aa8.46□□□□□ -1.06
SMARCE1-217ENST00000580654 IGHDP01880 384 aa8.46□□□□□ -1.06
SMARCE1-217ENST00000580654 EDN1P05305 212 aa8.46□□□□□ -1.06
SMARCE1-217ENST00000580654 P4HBP07237 508 aaKnown RBP8.46□□□□□ -1.06
SMARCE1-217ENST00000580654 U2AF2P26368 475 aaKnown RBP eCLIP8.46□□□□□ -1.06
SMARCE1-217ENST00000580654 GNA11P29992 359 aa8.46□□□□□ -1.06
SMARCE1-217ENST00000580654 YWHABP31946 246 aaKnown RBP8.46□□□□□ -1.06
SMARCE1-217ENST00000580654 ADD1P35611 737 aaKnown RBP8.46□□□□□ -1.06
SMARCE1-217ENST00000580654 DHPSP49366 369 aaPredicted RBP8.46□□□□□ -1.06
SMARCE1-217ENST00000580654 DGKEP52429 567 aa8.46□□□□□ -1.06
SMARCE1-217ENST00000580654 GRSF1Q12849 480 aaKnown RBP eCLIP8.46□□□□□ -1.06
SMARCE1-217ENST00000580654 LMAN2Q12907 356 aa8.46□□□□□ -1.06
SMARCE1-217ENST00000580654 PPP2R5CQ13362 524 aa8.46□□□□□ -1.06
SMARCE1-217ENST00000580654 TFDP1Q14186 410 aa8.46□□□□□ -1.06
SMARCE1-217ENST00000580654 DMC1Q14565 340 aa8.46□□□□□ -1.06
SMARCE1-217ENST00000580654 XKR9Q5GH70 373 aa8.46□□□□□ -1.06
SMARCE1-217ENST00000580654 TPGS2Q68CL5 300 aa8.46□□□□□ -1.06
SMARCE1-217ENST00000580654 RNF19BQ6ZMZ0 732 aa8.46□□□□□ -1.06
SMARCE1-217ENST00000580654 SYNE3Q6ZMZ3 975 aa8.46□□□□□ -1.06
SMARCE1-217ENST00000580654 GAREM2Q75VX8 874 aa8.46□□□□□ -1.06
SMARCE1-217ENST00000580654 NOSTRINQ8IVI9 506 aa8.46□□□□□ -1.06
SMARCE1-217ENST00000580654 C4orf19Q8IY42 314 aa8.46□□□□□ -1.06
SMARCE1-217ENST00000580654 RPLP0P6Q8NHW5 317 aa8.46□□□□□ -1.06
SMARCE1-217ENST00000580654 BPIFB1Q8TDL5 484 aa8.46□□□□□ -1.06
SMARCE1-217ENST00000580654 TBCKQ8TEA7 893 aa8.46□□□□□ -1.06
SMARCE1-217ENST00000580654 RUFY2Q8WXA3 655 aa8.46□□□□□ -1.06
SMARCE1-217ENST00000580654 ADAMTS14Q8WXS8 1223 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms