RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 LIG1P18858 919 aa15.49■□□□□ 0.07
CSNK1D-213ENST00000580446 GLRA2P23416 452 aa15.49■□□□□ 0.07
CSNK1D-213ENST00000580446 GABRR2P28476 465 aa15.49■□□□□ 0.07
CSNK1D-213ENST00000580446 CDC27P30260 824 aa15.49■□□□□ 0.07
CSNK1D-213ENST00000580446 LIFRP42702 1097 aa15.49■□□□□ 0.07
CSNK1D-213ENST00000580446 QARSP47897 775 aaKnown RBP15.49■□□□□ 0.07
CSNK1D-213ENST00000580446 TMEM132AQ24JP5 1023 aa15.49■□□□□ 0.07
CSNK1D-213ENST00000580446 C11orf74Q86VG3 221 aa15.49■□□□□ 0.07
CSNK1D-213ENST00000580446 TMTC2Q8N394 836 aa15.49■□□□□ 0.07
CSNK1D-213ENST00000580446 TTC9BQ8N6N2 239 aa15.49■□□□□ 0.07
CSNK1D-213ENST00000580446 FAM181AQ8N9Y4 354 aa15.49■□□□□ 0.07
CSNK1D-213ENST00000580446 ACDQ96AP0 544 aa15.49■□□□□ 0.07
CSNK1D-213ENST00000580446 CNOT6LQ96LI5 555 aaKnown RBP15.49■□□□□ 0.07
CSNK1D-213ENST00000580446 PPP1R10Q96QC0 940 aaKnown RBP15.49■□□□□ 0.07
CSNK1D-213ENST00000580446 ZMYND12Q9H0C1 365 aa15.49■□□□□ 0.07
CSNK1D-213ENST00000580446 C6orf50Q9HD87 102 aa15.49■□□□□ 0.07
CSNK1D-213ENST00000580446 AFF4Q9UHB7 1163 aaKnown RBP15.49■□□□□ 0.07
CSNK1D-213ENST00000580446 SLC6A14Q9UN76 642 aa15.49■□□□□ 0.07
CSNK1D-213ENST00000580446 SLC27A5Q9Y2P5 690 aa15.49■□□□□ 0.07
CSNK1D-213ENST00000580446 SHROOM3Q8TF72 1996 aa15.49■□□□□ 0.07
CSNK1D-213ENST00000580446 ADAMTS9Q9P2N4 1935 aa15.49■□□□□ 0.07
CSNK1D-213ENST00000580446 hCG_1984214I3L0E3 225 aa15.48■□□□□ 0.07
CSNK1D-213ENST00000580446 TRAPPC3O43617 180 aa15.48■□□□□ 0.07
CSNK1D-213ENST00000580446 EDN1P05305 212 aa15.48■□□□□ 0.07
CSNK1D-213ENST00000580446 DRD1P21728 446 aa15.48■□□□□ 0.07
CSNK1D-213ENST00000580446 YWHABP31946 246 aaKnown RBP15.48■□□□□ 0.07
CSNK1D-213ENST00000580446 EIF2S3P41091 472 aaKnown RBP15.48■□□□□ 0.07
CSNK1D-213ENST00000580446 TFDP1Q14186 410 aa15.48■□□□□ 0.07
CSNK1D-213ENST00000580446 CCDC157Q569K6 752 aa15.48■□□□□ 0.07
CSNK1D-213ENST00000580446 EEF1DP3Q658K8 133 aa15.48■□□□□ 0.07
CSNK1D-213ENST00000580446 TPGS2Q68CL5 300 aa15.48■□□□□ 0.07
CSNK1D-213ENST00000580446 APOA5Q6Q788 366 aa15.48■□□□□ 0.07
CSNK1D-213ENST00000580446 RASSF3Q86WH2 238 aa15.48■□□□□ 0.07
CSNK1D-213ENST00000580446 TEX2Q8IWB9 1127 aa15.48■□□□□ 0.07
CSNK1D-213ENST00000580446 ZNF713Q8N859 430 aaPredicted RBP15.48■□□□□ 0.07
CSNK1D-213ENST00000580446 THG1LQ9NWX6 298 aaKnown RBP15.48■□□□□ 0.07
CSNK1D-213ENST00000580446 RGL1Q9NZL6 768 aa15.48■□□□□ 0.07
CSNK1D-213ENST00000580446 DKK4Q9UBT3 224 aa15.48■□□□□ 0.07
CSNK1D-213ENST00000580446 DNMT3LQ9UJW3 386 aa15.48■□□□□ 0.07
CSNK1D-213ENST00000580446 APOBEC2Q9Y235 224 aaKnown RBP15.48■□□□□ 0.07
CSNK1D-213ENST00000580446 RBM8AQ9Y5S9 174 aaKnown RBP15.48■□□□□ 0.07
CSNK1D-213ENST00000580446 GON4LQ3T8J9 2241 aa15.48■□□□□ 0.07
CSNK1D-213ENST00000580446 GJA4P35212 333 aa15.47■□□□□ 0.07
CSNK1D-213ENST00000580446 P2RY2P41231 377 aa15.47■□□□□ 0.07
CSNK1D-213ENST00000580446 CYP4A11Q02928 519 aa15.47■□□□□ 0.07
CSNK1D-213ENST00000580446 DUSP4Q13115 394 aa15.47■□□□□ 0.07
CSNK1D-213ENST00000580446 CTTNQ14247 550 aaKnown RBP15.47■□□□□ 0.07
CSNK1D-213ENST00000580446 PTPAQ15257 358 aa15.47■□□□□ 0.07
CSNK1D-213ENST00000580446 PCBP1Q15365 356 aaKnown RBP eCLIP15.47■□□□□ 0.07
CSNK1D-213ENST00000580446 PFKFB3Q16875 520 aaPredicted RBP15.47■□□□□ 0.07
CSNK1D-213ENST00000580446 TMEM92Q6UXU6 159 aa15.47■□□□□ 0.07
CSNK1D-213ENST00000580446 MAEAQ7L5Y9 396 aa15.47■□□□□ 0.07
CSNK1D-213ENST00000580446 IFNLR1Q8IU57 520 aaPredicted RBP15.47■□□□□ 0.07
CSNK1D-213ENST00000580446 ETNPPLQ8TBG4 499 aa15.47■□□□□ 0.07
CSNK1D-213ENST00000580446 LXNQ9BS40 222 aa15.47■□□□□ 0.07
CSNK1D-213ENST00000580446 SEMA4CQ9C0C4 833 aa15.47■□□□□ 0.07
CSNK1D-213ENST00000580446 SLKQ9H2G2 1235 aaPredicted RBP15.47■□□□□ 0.07
CSNK1D-213ENST00000580446 CAPN10Q9HC96 672 aa15.47■□□□□ 0.07
CSNK1D-213ENST00000580446 ZDHHC4Q9NPG8 344 aa15.47■□□□□ 0.07
CSNK1D-213ENST00000580446 RBM28Q9NW13 759 aaKnown RBP15.47■□□□□ 0.07
CSNK1D-213ENST00000580446 MYO9AB2RTY4 2548 aa15.47■□□□□ 0.07
CSNK1D-213ENST00000580446 A0A087WWV3 80 aa15.46■□□□□ 0.07
CSNK1D-213ENST00000580446 LRRIQ4A6NIV6 560 aa15.46■□□□□ 0.07
CSNK1D-213ENST00000580446 GOLGA8AA7E2F4 631 aa15.46■□□□□ 0.07
CSNK1D-213ENST00000580446 GOLGA8BA8MQT2 603 aa15.46■□□□□ 0.07
CSNK1D-213ENST00000580446 H7C4K7 107 aa15.46■□□□□ 0.07
CSNK1D-213ENST00000580446 ARHGAP33O14559 1287 aa15.46■□□□□ 0.07
CSNK1D-213ENST00000580446 ATXN1LP0C7T5 689 aaKnown RBP15.46■□□□□ 0.07
CSNK1D-213ENST00000580446 MXD4Q14582 209 aaPredicted RBP15.46■□□□□ 0.07
CSNK1D-213ENST00000580446 DUOXA1Q1HG43 343 aa15.46■□□□□ 0.07
CSNK1D-213ENST00000580446 SYNE3Q6ZMZ3 975 aa15.46■□□□□ 0.07
CSNK1D-213ENST00000580446 TMPRSS7Q7RTY8 843 aa15.46■□□□□ 0.07
CSNK1D-213ENST00000580446 SFTPA1Q8IWL2 248 aa15.46■□□□□ 0.07
CSNK1D-213ENST00000580446 OLIG1Q8TAK6 271 aa15.46■□□□□ 0.07
CSNK1D-213ENST00000580446 SLC46A2Q9BY10 475 aa15.46■□□□□ 0.07
CSNK1D-213ENST00000580446 POLR3FQ9H1D9 316 aaPredicted RBP15.46■□□□□ 0.07
CSNK1D-213ENST00000580446 PRDM16Q9HAZ2 1276 aa15.46■□□□□ 0.07
CSNK1D-213ENST00000580446 GPRC5CQ9NQ84 441 aa15.46■□□□□ 0.07
CSNK1D-213ENST00000580446 OBP2AQ9NY56 170 aa15.46■□□□□ 0.07
CSNK1D-213ENST00000580446 NAP1L2Q9ULW6 460 aaPredicted RBP15.46■□□□□ 0.07
CSNK1D-213ENST00000580446 ESYT2A0FGR8 921 aa15.45■□□□□ 0.06
CSNK1D-213ENST00000580446 PODXLO00592 558 aa15.45■□□□□ 0.06
CSNK1D-213ENST00000580446 CAPN9O14815 690 aa15.45■□□□□ 0.06
CSNK1D-213ENST00000580446 SERPINF2P08697 491 aa15.45■□□□□ 0.06
CSNK1D-213ENST00000580446 EPHB3P54753 998 aa15.45■□□□□ 0.06
CSNK1D-213ENST00000580446 HNRNPDQ14103 355 aaKnown RBP15.45■□□□□ 0.06
CSNK1D-213ENST00000580446 MRPL58Q14197 206 aaKnown RBP15.45■□□□□ 0.06
CSNK1D-213ENST00000580446 ARHGAP15Q53QZ3 475 aa15.45■□□□□ 0.06
CSNK1D-213ENST00000580446 ZNF280DQ6N043 979 aa15.45■□□□□ 0.06
CSNK1D-213ENST00000580446 DNAJB7Q7Z6W7 309 aaPredicted RBP15.45■□□□□ 0.06
CSNK1D-213ENST00000580446 TBCKQ8TEA7 893 aa15.45■□□□□ 0.06
CSNK1D-213ENST00000580446 CD101Q93033 1021 aa15.45■□□□□ 0.06
CSNK1D-213ENST00000580446 DYDC2Q96IM9 177 aa15.45■□□□□ 0.06
CSNK1D-213ENST00000580446 LPIN3Q9BQK8 851 aa15.45■□□□□ 0.06
CSNK1D-213ENST00000580446 OSBPL3Q9H4L5 887 aa15.45■□□□□ 0.06
CSNK1D-213ENST00000580446 BCCIPQ9P287 314 aaKnown RBP eCLIP15.45■□□□□ 0.068e-7■■□□□ 14.4
CSNK1D-213ENST00000580446 VAV3Q9UKW4 847 aa15.45■□□□□ 0.06
CSNK1D-213ENST00000580446 TIMM13Q9Y5L4 95 aaPredicted RBP15.45■□□□□ 0.06
CSNK1D-213ENST00000580446 COL12A1Q99715 3063 aa15.45■□□□□ 0.06
CSNK1D-213ENST00000580446 TLX3O43711 291 aaPredicted RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms