RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 RBP5P82980 135 aa20.12■□□□□ 0.81
PPP4R1-215ENST00000580182 BFSP1Q12934 665 aa20.12■□□□□ 0.81
PPP4R1-215ENST00000580182 DUOXA2Q1HG44 320 aa20.12■□□□□ 0.81
PPP4R1-215ENST00000580182 WSCD1Q658N2 575 aa20.12■□□□□ 0.81
PPP4R1-215ENST00000580182 RNF19BQ6ZMZ0 732 aa20.12■□□□□ 0.81
PPP4R1-215ENST00000580182 SLC9A9Q8IVB4 645 aa20.12■□□□□ 0.81
PPP4R1-215ENST00000580182 GUF1Q8N442 669 aaKnown RBP20.12■□□□□ 0.81
PPP4R1-215ENST00000580182 ZNF560Q96MR9 790 aa20.12■□□□□ 0.81
PPP4R1-215ENST00000580182 FNBP1Q96RU3 617 aa20.12■□□□□ 0.81
PPP4R1-215ENST00000580182 CGRRF1Q99675 332 aa20.12■□□□□ 0.81
PPP4R1-215ENST00000580182 RTP3Q9BQQ7 232 aa20.12■□□□□ 0.81
PPP4R1-215ENST00000580182 TRAF3IP3Q9Y228 551 aa20.12■□□□□ 0.81
PPP4R1-215ENST00000580182 CALUO43852 315 aaPredicted RBP20.11■□□□□ 0.81
PPP4R1-215ENST00000580182 VNN2O95498 520 aa20.11■□□□□ 0.81
PPP4R1-215ENST00000580182 ATF2P15336 505 aa20.11■□□□□ 0.81
PPP4R1-215ENST00000580182 PNPLA4P41247 253 aa20.11■□□□□ 0.81
PPP4R1-215ENST00000580182 CDR1P51861 262 aa20.11■□□□□ 0.81
PPP4R1-215ENST00000580182 NTHL1P78549 312 aa20.11■□□□□ 0.81
PPP4R1-215ENST00000580182 UVSSAQ2YD98 709 aa20.11■□□□□ 0.81
PPP4R1-215ENST00000580182 CYP26C1Q6V0L0 522 aa20.11■□□□□ 0.81
PPP4R1-215ENST00000580182 CCDC149Q6ZUS6 474 aa20.11■□□□□ 0.81
PPP4R1-215ENST00000580182 LRRC52Q8N7C0 313 aa20.11■□□□□ 0.81
PPP4R1-215ENST00000580182 OR10T2Q8NGX3 314 aa20.11■□□□□ 0.81
PPP4R1-215ENST00000580182 SPATA20Q8TB22 786 aa20.11■□□□□ 0.81
PPP4R1-215ENST00000580182 SMARCE1Q969G3 411 aa20.11■□□□□ 0.81
PPP4R1-215ENST00000580182 PGLYRP2Q96PD5 576 aa20.11■□□□□ 0.81
PPP4R1-215ENST00000580182 RHOBTB2Q9BYZ6 727 aa20.11■□□□□ 0.81
PPP4R1-215ENST00000580182 CYP4F11Q9HBI6 524 aa20.11■□□□□ 0.81
PPP4R1-215ENST00000580182 WDR6Q9NNW5 1121 aaKnown RBP20.11■□□□□ 0.81
PPP4R1-215ENST00000580182 MUTYHQ9UIF7 546 aa20.11■□□□□ 0.81
PPP4R1-215ENST00000580182 POLIQ9UNA4 740 aa20.11■□□□□ 0.81
PPP4R1-215ENST00000580182 NR2E1Q9Y466 385 aa20.11■□□□□ 0.81
PPP4R1-215ENST00000580182 CLUHO75153 1309 aa20.1■□□□□ 0.81
PPP4R1-215ENST00000580182 KINO60870 393 aaKnown RBP20.1■□□□□ 0.81
PPP4R1-215ENST00000580182 N4BP1O75113 896 aaKnown RBP20.1■□□□□ 0.81
PPP4R1-215ENST00000580182 KIF20AO95235 890 aa20.1■□□□□ 0.81
PPP4R1-215ENST00000580182 CST3P01034 146 aaPredicted RBP20.1■□□□□ 0.81
PPP4R1-215ENST00000580182 HNRNPA1P09651 372 aaKnown RBP eCLIP20.1■□□□□ 0.81
PPP4R1-215ENST00000580182 ELF1P32519 619 aa20.1■□□□□ 0.81
PPP4R1-215ENST00000580182 ADCY1Q08828 1119 aa20.1■□□□□ 0.81
PPP4R1-215ENST00000580182 CEP135Q66GS9 1140 aa20.1■□□□□ 0.81
PPP4R1-215ENST00000580182 TPGS2Q68CL5 300 aa20.1■□□□□ 0.81
PPP4R1-215ENST00000580182 ISM2Q6H9L7 571 aa20.1■□□□□ 0.81
PPP4R1-215ENST00000580182 TRAPPC11Q7Z392 1133 aa20.1■□□□□ 0.81
PPP4R1-215ENST00000580182 GRASPQ7Z6J2 395 aaPredicted RBP20.1■□□□□ 0.81
PPP4R1-215ENST00000580182 TMEM174Q8WUU8 243 aa20.1■□□□□ 0.81
PPP4R1-215ENST00000580182 GSDMAQ96QA5 445 aa20.1■□□□□ 0.81
PPP4R1-215ENST00000580182 RMND1Q9NWS8 449 aa20.1■□□□□ 0.81
PPP4R1-215ENST00000580182 HCFC1R1Q9NWW0 138 aa20.1■□□□□ 0.81
PPP4R1-215ENST00000580182 DOCK6Q96HP0 2047 aa20.1■□□□□ 0.81
PPP4R1-215ENST00000580182 OR6C75A6NL08 312 aa20.09■□□□□ 0.81
PPP4R1-215ENST00000580182 LRRIQ3A6PVS8 624 aaPredicted RBP20.09■□□□□ 0.81
PPP4R1-215ENST00000580182 PI4K2BG5E9Z4 385 aa20.09■□□□□ 0.81
PPP4R1-215ENST00000580182 PRRG1O14668 218 aa20.09■□□□□ 0.81
PPP4R1-215ENST00000580182 PRPF40AO75400 957 aaKnown RBP20.09■□□□□ 0.81
PPP4R1-215ENST00000580182 SMC2O95347 1197 aa20.09■□□□□ 0.81
PPP4R1-215ENST00000580182 HOXA9P31269 272 aa20.09■□□□□ 0.81
PPP4R1-215ENST00000580182 PRCPP42785 496 aa20.09■□□□□ 0.81
PPP4R1-215ENST00000580182 DLG4P78352 724 aa20.09■□□□□ 0.81
PPP4R1-215ENST00000580182 ZNF658Q5TYW1 1059 aaPredicted RBP20.09■□□□□ 0.81
PPP4R1-215ENST00000580182 METTL23Q86XA0 190 aa20.09■□□□□ 0.81
PPP4R1-215ENST00000580182 TCEAL8Q8IYN2 117 aa20.09■□□□□ 0.81
PPP4R1-215ENST00000580182 TDRD5Q8NAT2 981 aaKnown RBP20.09■□□□□ 0.81
PPP4R1-215ENST00000580182 PARD3BQ8TEW8 1205 aa20.09■□□□□ 0.81
PPP4R1-215ENST00000580182 CRISPLD1Q9H336 500 aa20.09■□□□□ 0.81
PPP4R1-215ENST00000580182 AFF4Q9UHB7 1163 aaKnown RBP20.09■□□□□ 0.81
PPP4R1-215ENST00000580182 DSEQ9UL01 958 aa20.09■□□□□ 0.81
PPP4R1-215ENST00000580182 L1RE1Q9UN81 338 aa20.09■□□□□ 0.81
PPP4R1-215ENST00000580182 SNX9Q9Y5X1 595 aa20.09■□□□□ 0.81
PPP4R1-215ENST00000580182 ARHGEF37A1IGU5 675 aa20.08■□□□□ 0.81
PPP4R1-215ENST00000580182 NR2F2P24468 414 aa20.08■□□□□ 0.81
PPP4R1-215ENST00000580182 UBE2HP62256 183 aa20.08■□□□□ 0.81
PPP4R1-215ENST00000580182 GPR17Q13304 367 aa20.08■□□□□ 0.81
PPP4R1-215ENST00000580182 MYBPC2Q14324 1141 aa20.08■□□□□ 0.81
PPP4R1-215ENST00000580182 ZCWPW2Q504Y3 356 aa20.08■□□□□ 0.81
PPP4R1-215ENST00000580182 ELOA2Q8IYF1 753 aaPredicted RBP20.08■□□□□ 0.81
PPP4R1-215ENST00000580182 PDCL2Q8N4E4 241 aa20.08■□□□□ 0.81
PPP4R1-215ENST00000580182 HPDLQ96IR7 371 aa20.08■□□□□ 0.81
PPP4R1-215ENST00000580182 OXCT2Q9BYC2 517 aaPredicted RBP20.08■□□□□ 0.81
PPP4R1-215ENST00000580182 DNMT3BQ9UBC3 853 aaKnown RBP20.08■□□□□ 0.81
PPP4R1-215ENST00000580182 HOOK1Q9UJC3 728 aaKnown RBP20.08■□□□□ 0.81
PPP4R1-215ENST00000580182 MAN1B1Q9UKM7 699 aa20.08■□□□□ 0.81
PPP4R1-215ENST00000580182 USTQ9Y2C2 406 aa20.08■□□□□ 0.81
PPP4R1-215ENST00000580182 INSL5Q9Y5Q6 135 aa20.08■□□□□ 0.81
PPP4R1-215ENST00000580182 DCXO43602 365 aa20.07■□□□□ 0.8
PPP4R1-215ENST00000580182 HCRTO43612 131 aa20.07■□□□□ 0.8
PPP4R1-215ENST00000580182 XYLBO75191 536 aa20.07■□□□□ 0.8
PPP4R1-215ENST00000580182 AKAP3O75969 853 aa20.07■□□□□ 0.8
PPP4R1-215ENST00000580182 NFIL3Q16649 462 aa20.07■□□□□ 0.8
PPP4R1-215ENST00000580182 SLC39A12Q504Y0 691 aa20.07■□□□□ 0.8
PPP4R1-215ENST00000580182 GET4Q7L5D6 327 aaPredicted RBP20.07■□□□□ 0.8
PPP4R1-215ENST00000580182 LRRTM3Q86VH5 581 aa20.07■□□□□ 0.8
PPP4R1-215ENST00000580182 OSTM1Q86WC4 334 aa20.07■□□□□ 0.8
PPP4R1-215ENST00000580182 THEM5Q8N1Q8 247 aa20.07■□□□□ 0.8
PPP4R1-215ENST00000580182 ATAD1Q8NBU5 361 aa20.07■□□□□ 0.8
PPP4R1-215ENST00000580182 EEF2KMTQ96G04 330 aa20.07■□□□□ 0.8
PPP4R1-215ENST00000580182 MYADMQ96S97 322 aa20.07■□□□□ 0.8
PPP4R1-215ENST00000580182 ZCWPW1Q9H0M4 648 aa20.07■□□□□ 0.8
PPP4R1-215ENST00000580182 GDAP2Q9NXN4 497 aa20.07■□□□□ 0.8
PPP4R1-215ENST00000580182 LIMD1Q9UGP4 676 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms