RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 ENOSF1Q7L5Y1 443 aa12.09□□□□□ -0.47
CDK5RAP3-210ENST00000578733 DDX53Q86TM3 631 aaKnown RBP12.09□□□□□ -0.47
CDK5RAP3-210ENST00000578733 KLHL23Q8NBE8 558 aa12.09□□□□□ -0.47
CDK5RAP3-210ENST00000578733 HASPINQ8TF76 798 aa12.09□□□□□ -0.47
CDK5RAP3-210ENST00000578733 ATXN2LQ8WWM7 1075 aaKnown RBP12.09□□□□□ -0.47
CDK5RAP3-210ENST00000578733 IQCDQ96DY2 449 aa12.09□□□□□ -0.47
CDK5RAP3-210ENST00000578733 FAM122AQ96E09 287 aa12.09□□□□□ -0.47
CDK5RAP3-210ENST00000578733 SUSD3Q96L08 255 aa12.09□□□□□ -0.47
CDK5RAP3-210ENST00000578733 SENP8Q96LD8 212 aa12.09□□□□□ -0.47
CDK5RAP3-210ENST00000578733 MMS19Q96T76 1030 aa12.09□□□□□ -0.47
CDK5RAP3-210ENST00000578733 C17orf80Q9BSJ5 609 aa12.09□□□□□ -0.47
CDK5RAP3-210ENST00000578733 CRACR2AQ9BSW2 395 aa12.09□□□□□ -0.47
CDK5RAP3-210ENST00000578733 HERC2P3Q9BVR0 1158 aa12.09□□□□□ -0.47
CDK5RAP3-210ENST00000578733 OXCT2Q9BYC2 517 aaPredicted RBP12.09□□□□□ -0.47
CDK5RAP3-210ENST00000578733 TRIM5Q9C035 493 aa12.09□□□□□ -0.47
CDK5RAP3-210ENST00000578733 NIF3L1Q9GZT8 377 aa12.09□□□□□ -0.47
CDK5RAP3-210ENST00000578733 LMAN2LQ9H0V9 348 aa12.09□□□□□ -0.47
CDK5RAP3-210ENST00000578733 MARCH5Q9NX47 278 aa12.09□□□□□ -0.47
CDK5RAP3-210ENST00000578733 IFNKQ9P0W0 207 aa12.09□□□□□ -0.47
CDK5RAP3-210ENST00000578733 NXF1Q9UBU9 619 aaKnown RBP12.09□□□□□ -0.47
CDK5RAP3-210ENST00000578733 MTUS1Q9ULD2 1270 aa12.09□□□□□ -0.47
CDK5RAP3-210ENST00000578733 A0A1W2PQC6 194 aa12.08□□□□□ -0.48
CDK5RAP3-210ENST00000578733 H3BNC9 293 aa12.08□□□□□ -0.48
CDK5RAP3-210ENST00000578733 H7C4K7 107 aa12.08□□□□□ -0.48
CDK5RAP3-210ENST00000578733 M0QZQ0 153 aa12.08□□□□□ -0.48
CDK5RAP3-210ENST00000578733 PPEF2O14830 753 aa12.08□□□□□ -0.48
CDK5RAP3-210ENST00000578733 TYMPP19971 482 aa12.08□□□□□ -0.48
CDK5RAP3-210ENST00000578733 BRCC3P46736 316 aa12.08□□□□□ -0.48
CDK5RAP3-210ENST00000578733 GLUD2P49448 558 aa12.08□□□□□ -0.48
CDK5RAP3-210ENST00000578733 LRMPQ12912 555 aa12.08□□□□□ -0.48
CDK5RAP3-210ENST00000578733 GPM6BQ13491 265 aa12.08□□□□□ -0.48
CDK5RAP3-210ENST00000578733 SYCP1Q15431 976 aa12.08□□□□□ -0.48
CDK5RAP3-210ENST00000578733 PTPROQ16827 1216 aa12.08□□□□□ -0.48
CDK5RAP3-210ENST00000578733 FAM171A1Q5VUB5 890 aa12.08□□□□□ -0.48
CDK5RAP3-210ENST00000578733 PDE12Q6L8Q7 609 aaKnown RBP12.08□□□□□ -0.48
CDK5RAP3-210ENST00000578733 TRIM65Q6PJ69 517 aa12.08□□□□□ -0.48
CDK5RAP3-210ENST00000578733 CEP57Q86XR8 500 aa12.08□□□□□ -0.48
CDK5RAP3-210ENST00000578733 FMNL3Q8IVF7 1028 aa12.08□□□□□ -0.48
CDK5RAP3-210ENST00000578733 THEM5Q8N1Q8 247 aa12.08□□□□□ -0.48
CDK5RAP3-210ENST00000578733 PPM1KQ8N3J5 372 aa12.08□□□□□ -0.48
CDK5RAP3-210ENST00000578733 C3orf58Q8NDZ4 430 aa12.08□□□□□ -0.48
CDK5RAP3-210ENST00000578733 NEK11Q8NG66 645 aa12.08□□□□□ -0.48
CDK5RAP3-210ENST00000578733 CXorf38Q8TB03 319 aa12.08□□□□□ -0.48
CDK5RAP3-210ENST00000578733 ARNTL2Q8WYA1 636 aa12.08□□□□□ -0.48
CDK5RAP3-210ENST00000578733 ANP32BQ92688 251 aaKnown RBP12.08□□□□□ -0.48
CDK5RAP3-210ENST00000578733 RABGGTAQ92696 567 aa12.08□□□□□ -0.48
CDK5RAP3-210ENST00000578733 FAM84AQ96KN4 292 aa12.08□□□□□ -0.48
CDK5RAP3-210ENST00000578733 ERGIC2Q96RQ1 377 aa12.08□□□□□ -0.48
CDK5RAP3-210ENST00000578733 TTPALQ9BTX7 342 aa12.08□□□□□ -0.48
CDK5RAP3-210ENST00000578733 NUP58Q9BVL2 599 aa12.08□□□□□ -0.48
CDK5RAP3-210ENST00000578733 LSM14BQ9BX40 385 aaKnown RBP12.08□□□□□ -0.48
CDK5RAP3-210ENST00000578733 CYP3A43Q9HB55 503 aa12.08□□□□□ -0.48
CDK5RAP3-210ENST00000578733 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.08□□□□□ -0.48
CDK5RAP3-210ENST00000578733 CACNG4Q9UBN1 327 aa12.08□□□□□ -0.48
CDK5RAP3-210ENST00000578733 APEX2Q9UBZ4 518 aa12.08□□□□□ -0.48
CDK5RAP3-210ENST00000578733 TACC1O75410 805 aa12.07□□□□□ -0.48
CDK5RAP3-210ENST00000578733 TPM1P09493 284 aa12.07□□□□□ -0.48
CDK5RAP3-210ENST00000578733 FGFR3P22607 806 aa12.07□□□□□ -0.48
CDK5RAP3-210ENST00000578733 PON1P27169 355 aa12.07□□□□□ -0.48
CDK5RAP3-210ENST00000578733 CA8P35219 290 aa12.07□□□□□ -0.48
CDK5RAP3-210ENST00000578733 LHX1P48742 406 aa12.07□□□□□ -0.48
CDK5RAP3-210ENST00000578733 MFAP3P55082 362 aa12.07□□□□□ -0.48
CDK5RAP3-210ENST00000578733 GCNT1Q02742 428 aa12.07□□□□□ -0.48
CDK5RAP3-210ENST00000578733 YWHAHQ04917 246 aaPredicted RBP12.07□□□□□ -0.48
CDK5RAP3-210ENST00000578733 GRIN2CQ14957 1233 aa12.07□□□□□ -0.48
CDK5RAP3-210ENST00000578733 NR1I3Q14994 352 aa12.07□□□□□ -0.48
CDK5RAP3-210ENST00000578733 TIGD5Q53EQ6 642 aa12.07□□□□□ -0.48
CDK5RAP3-210ENST00000578733 ZNF280DQ6N043 979 aa12.07□□□□□ -0.48
CDK5RAP3-210ENST00000578733 ANKS3Q6ZW76 656 aa12.07□□□□□ -0.48
CDK5RAP3-210ENST00000578733 GPR65Q8IYL9 337 aa12.07□□□□□ -0.48
CDK5RAP3-210ENST00000578733 ADGRF2Q8IZF7 708 aa12.07□□□□□ -0.48
CDK5RAP3-210ENST00000578733 SEMA4DQ92854 862 aa12.07□□□□□ -0.48
CDK5RAP3-210ENST00000578733 JAKMIP2Q96AA8 810 aa12.07□□□□□ -0.48
CDK5RAP3-210ENST00000578733 GAS2L1Q99501 681 aaPredicted RBP12.07□□□□□ -0.48
CDK5RAP3-210ENST00000578733 PI4K2AQ9BTU6 479 aa12.07□□□□□ -0.48
CDK5RAP3-210ENST00000578733 XPO4Q9C0E2 1151 aaKnown RBP12.07□□□□□ -0.48
CDK5RAP3-210ENST00000578733 XYLT2Q9H1B5 865 aa12.07□□□□□ -0.48
CDK5RAP3-210ENST00000578733 SNX25Q9H3E2 840 aa12.07□□□□□ -0.48
CDK5RAP3-210ENST00000578733 NGRNQ9NPE2 291 aaKnown RBP12.07□□□□□ -0.48
CDK5RAP3-210ENST00000578733 PLCB1Q9NQ66 1216 aa12.07□□□□□ -0.48
CDK5RAP3-210ENST00000578733 ENTPD7Q9NQZ7 604 aa12.07□□□□□ -0.48
CDK5RAP3-210ENST00000578733 TLR9Q9NR96 1032 aa12.07□□□□□ -0.48
CDK5RAP3-210ENST00000578733 MRPL17Q9NRX2 175 aaKnown RBP12.07□□□□□ -0.48
CDK5RAP3-210ENST00000578733 PTPRDP23468 1912 aa12.06□□□□□ -0.48
CDK5RAP3-210ENST00000578733 I3L4J1 428 aa12.06□□□□□ -0.48
CDK5RAP3-210ENST00000578733 SPTLC1O15269 473 aa12.06□□□□□ -0.48
CDK5RAP3-210ENST00000578733 CYP11A1P05108 521 aa12.06□□□□□ -0.48
CDK5RAP3-210ENST00000578733 ITGB1P05556 798 aa12.06□□□□□ -0.48
CDK5RAP3-210ENST00000578733 LINC00271P0C7V0 271 aa12.06□□□□□ -0.48
CDK5RAP3-210ENST00000578733 SLC9A1P19634 815 aa12.06□□□□□ -0.48
CDK5RAP3-210ENST00000578733 PCSK1P29120 753 aa12.06□□□□□ -0.48
CDK5RAP3-210ENST00000578733 CUL2Q13617 745 aa12.06□□□□□ -0.48
CDK5RAP3-210ENST00000578733 TRIM14Q14142 442 aa12.06□□□□□ -0.48
CDK5RAP3-210ENST00000578733 SMC1AQ14683 1233 aaKnown RBP12.06□□□□□ -0.48
CDK5RAP3-210ENST00000578733 OVOS1Q6IE37 1185 aa12.06□□□□□ -0.48
CDK5RAP3-210ENST00000578733 SPOPLQ6IQ16 392 aa12.06□□□□□ -0.48
CDK5RAP3-210ENST00000578733 SCARA5Q6ZMJ2 495 aa12.06□□□□□ -0.48
CDK5RAP3-210ENST00000578733 CACNA2D4Q7Z3S7 1137 aa12.06□□□□□ -0.48
CDK5RAP3-210ENST00000578733 TMC7Q7Z402 723 aa12.06□□□□□ -0.48
CDK5RAP3-210ENST00000578733 TMEM173Q86WV6 379 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms