RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 HEXIM1O94992 359 aaKnown RBP11.83□□□□□ -0.52
SKA2-204ENST00000578519 NPTXRO95502 500 aa11.83□□□□□ -0.52
SKA2-204ENST00000578519 TBC1D8O95759 1140 aa11.83□□□□□ -0.52
SKA2-204ENST00000578519 FGGP02679 453 aa11.83□□□□□ -0.52
SKA2-204ENST00000578519 ITGB3P05106 788 aa11.83□□□□□ -0.52
SKA2-204ENST00000578519 RARBP10826 455 aa11.83□□□□□ -0.52
SKA2-204ENST00000578519 CD19P15391 556 aa11.83□□□□□ -0.52
SKA2-204ENST00000578519 CD58P19256 250 aa11.83□□□□□ -0.52
SKA2-204ENST00000578519 CHRNA3P32297 505 aa11.83□□□□□ -0.52
SKA2-204ENST00000578519 CTNNA1P35221 906 aaKnown RBP11.83□□□□□ -0.52
SKA2-204ENST00000578519 PNPLA4P41247 253 aa11.83□□□□□ -0.52
SKA2-204ENST00000578519 PSMC4P43686 418 aa11.83□□□□□ -0.52
SKA2-204ENST00000578519 GJA9P57773 515 aa11.83□□□□□ -0.52
SKA2-204ENST00000578519 PTP4A2Q12974 167 aa11.83□□□□□ -0.52
SKA2-204ENST00000578519 CRHR2Q13324 411 aa11.83□□□□□ -0.52
SKA2-204ENST00000578519 KIZQ2M2Z5 673 aa11.83□□□□□ -0.52
SKA2-204ENST00000578519 SLC10A6Q3KNW5 377 aa11.83□□□□□ -0.52
SKA2-204ENST00000578519 MON1BQ7L1V2 547 aa11.83□□□□□ -0.52
SKA2-204ENST00000578519 RHOT1Q8IXI2 618 aa11.83□□□□□ -0.52
SKA2-204ENST00000578519 KLHL7Q8IXQ5 586 aa11.83□□□□□ -0.52
SKA2-204ENST00000578519 LRRC52Q8N7C0 313 aa11.83□□□□□ -0.52
SKA2-204ENST00000578519 WHAMMQ8TF30 809 aa11.83□□□□□ -0.52
SKA2-204ENST00000578519 KAT2BQ92831 832 aa11.83□□□□□ -0.52
SKA2-204ENST00000578519 RUFY1Q96T51 708 aa11.83□□□□□ -0.52
SKA2-204ENST00000578519 ARID3AQ99856 593 aa11.83□□□□□ -0.52
SKA2-204ENST00000578519 NCAPGQ9BPX3 1015 aa11.83□□□□□ -0.52
SKA2-204ENST00000578519 FUT8Q9BYC5 575 aa11.83□□□□□ -0.52
SKA2-204ENST00000578519 XYLT2Q9H1B5 865 aa11.83□□□□□ -0.52
SKA2-204ENST00000578519 GPBP1L1Q9HC44 474 aaPredicted RBP11.83□□□□□ -0.52
SKA2-204ENST00000578519 ZNF446Q9NWS9 450 aa11.83□□□□□ -0.52
SKA2-204ENST00000578519 FAM53CQ9NYF3 392 aa11.83□□□□□ -0.52
SKA2-204ENST00000578519 UBQLN1Q9UMX0 589 aaKnown RBP11.83□□□□□ -0.52
SKA2-204ENST00000578519 COG5Q9UP83 839 aa11.83□□□□□ -0.52
SKA2-204ENST00000578519 FAM155AB1AL88 458 aaPredicted RBP11.82□□□□□ -0.52
SKA2-204ENST00000578519 PODXLO00592 558 aa11.82□□□□□ -0.52
SKA2-204ENST00000578519 SART1O43290 800 aaKnown RBP11.82□□□□□ -0.52
SKA2-204ENST00000578519 PSTPIP1O43586 416 aa11.82□□□□□ -0.52
SKA2-204ENST00000578519 PROSCO94903 275 aa11.82□□□□□ -0.52
SKA2-204ENST00000578519 SEC31AO94979 1220 aaKnown RBP11.82□□□□□ -0.52
SKA2-204ENST00000578519 TFRCP02786 760 aaKnown RBP11.82□□□□□ -0.52
SKA2-204ENST00000578519 FAM163BP0C2L3 166 aa11.82□□□□□ -0.52
SKA2-204ENST00000578519 C6orf222P0C671 652 aaPredicted RBP11.82□□□□□ -0.52
SKA2-204ENST00000578519 IQCF3P0C7M6 154 aa11.82□□□□□ -0.52
SKA2-204ENST00000578519 MMP8P22894 467 aa11.82□□□□□ -0.52
SKA2-204ENST00000578519 CDH5P33151 784 aaPredicted RBP11.82□□□□□ -0.52
SKA2-204ENST00000578519 RNASE9P60153 205 aaKnown RBP11.82□□□□□ -0.52
SKA2-204ENST00000578519 GUCY2DQ02846 1103 aa11.82□□□□□ -0.52
SKA2-204ENST00000578519 PIGHQ14442 188 aaPredicted RBP11.82□□□□□ -0.52
SKA2-204ENST00000578519 SMC1AQ14683 1233 aaKnown RBP11.82□□□□□ -0.52
SKA2-204ENST00000578519 CASP8Q14790 479 aa11.82□□□□□ -0.52
SKA2-204ENST00000578519 CNGA2Q16280 664 aa11.82□□□□□ -0.52
SKA2-204ENST00000578519 GNASQ5JWF2 1037 aa11.82□□□□□ -0.52
SKA2-204ENST00000578519 ALS2CLQ60I27 953 aa11.82□□□□□ -0.52
SKA2-204ENST00000578519 PLEKHA7Q6IQ23 1121 aa11.82□□□□□ -0.52
SKA2-204ENST00000578519 DNAJC24Q6P3W2 148 aa11.82□□□□□ -0.52
SKA2-204ENST00000578519 DCUN1D2Q6PH85 259 aa11.82□□□□□ -0.52
SKA2-204ENST00000578519 CDR2LQ86X02 465 aaPredicted RBP11.82□□□□□ -0.52
SKA2-204ENST00000578519 DNAAF5Q86Y56 855 aa11.82□□□□□ -0.52
SKA2-204ENST00000578519 C1orf127Q8N9H9 656 aa11.82□□□□□ -0.52
SKA2-204ENST00000578519 TMEM176AQ96HP8 235 aa11.82□□□□□ -0.52
SKA2-204ENST00000578519 ZNF560Q96MR9 790 aa11.82□□□□□ -0.52
SKA2-204ENST00000578519 PPP1R16BQ96T49 567 aa11.82□□□□□ -0.52
SKA2-204ENST00000578519 C11orf70Q9BRQ4 267 aa11.82□□□□□ -0.52
SKA2-204ENST00000578519 FAM129AQ9BZQ8 928 aa11.82□□□□□ -0.52
SKA2-204ENST00000578519 EPB41L5Q9HCM4 733 aa11.82□□□□□ -0.52
SKA2-204ENST00000578519 MED4Q9NPJ6 270 aa11.82□□□□□ -0.52
SKA2-204ENST00000578519 GDF3Q9NR23 364 aa11.82□□□□□ -0.52
SKA2-204ENST00000578519 FLRT1Q9NZU1 646 aa11.82□□□□□ -0.52
SKA2-204ENST00000578519 PARP2Q9UGN5 583 aa11.82□□□□□ -0.52
SKA2-204ENST00000578519 BARX2Q9UMQ3 279 aaPredicted RBP11.82□□□□□ -0.52
SKA2-204ENST00000578519 GINS2Q9Y248 185 aa11.82□□□□□ -0.52
SKA2-204ENST00000578519 SPDYE4A6NLX3 237 aa11.81□□□□□ -0.52
SKA2-204ENST00000578519 SEPT4O43236 478 aa11.81□□□□□ -0.52
SKA2-204ENST00000578519 OPA1O60313 960 aa11.81□□□□□ -0.52
SKA2-204ENST00000578519 HSF2BPO75031 334 aa11.81□□□□□ -0.52
SKA2-204ENST00000578519 CABYRO75952 493 aa11.81□□□□□ -0.52
SKA2-204ENST00000578519 HMGCRP04035 888 aa11.81□□□□□ -0.52
SKA2-204ENST00000578519 NFICP08651 508 aa11.81□□□□□ -0.52
SKA2-204ENST00000578519 WEE2P0C1S8 567 aa11.81□□□□□ -0.52
SKA2-204ENST00000578519 CYP3A5P20815 502 aa11.81□□□□□ -0.52
SKA2-204ENST00000578519 RRM1P23921 792 aa11.81□□□□□ -0.52
SKA2-204ENST00000578519 ASPAP45381 313 aa11.81□□□□□ -0.52
SKA2-204ENST00000578519 NKX3-2P78367 333 aa11.81□□□□□ -0.52
SKA2-204ENST00000578519 ADAM17P78536 824 aa11.81□□□□□ -0.52
SKA2-204ENST00000578519 CBX1P83916 185 aa11.81□□□□□ -0.52
SKA2-204ENST00000578519 PURAQ00577 322 aaKnown RBP11.81□□□□□ -0.52
SKA2-204ENST00000578519 GABPB1Q06547 395 aaPredicted RBP11.81□□□□□ -0.52
SKA2-204ENST00000578519 ZNF268Q14587 947 aaPredicted RBP11.81□□□□□ -0.52
SKA2-204ENST00000578519 CCL14Q16627 93 aa11.81□□□□□ -0.52
SKA2-204ENST00000578519 HADHQ16836 314 aaKnown RBP11.81□□□□□ -0.52
SKA2-204ENST00000578519 SGO2Q562F6 1265 aa11.81□□□□□ -0.52
SKA2-204ENST00000578519 CEP120Q8N960 986 aa11.81□□□□□ -0.52
SKA2-204ENST00000578519 PCSK9Q8NBP7 692 aaKnown RBP11.81□□□□□ -0.52
SKA2-204ENST00000578519 IPO4Q8TEX9 1081 aaKnown RBP11.81□□□□□ -0.52
SKA2-204ENST00000578519 GRK7Q8WTQ7 553 aa11.81□□□□□ -0.52
SKA2-204ENST00000578519 DNAJB3Q8WWF6 145 aa11.81□□□□□ -0.52
SKA2-204ENST00000578519 CAVIN3Q969G5 261 aa11.81□□□□□ -0.52
SKA2-204ENST00000578519 LRRC45Q96CN5 670 aa11.81□□□□□ -0.52
SKA2-204ENST00000578519 OSMRQ99650 979 aa11.81□□□□□ -0.52
SKA2-204ENST00000578519 NT5C1AQ9BXI3 368 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms