RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 CENPPQ6IPU0 288 aa22.83■■□□□ 1.25
TSEN54-205ENST00000578415 PRR23BQ6ZRT6 265 aa22.83■■□□□ 1.25
TSEN54-205ENST00000578415 GPIHBP1Q8IV16 184 aa22.83■■□□□ 1.25
TSEN54-205ENST00000578415 YAF2Q8IY57 180 aa22.83■■□□□ 1.25
TSEN54-205ENST00000578415 SPEM1Q8N4L4 309 aa22.83■■□□□ 1.25
TSEN54-205ENST00000578415 TTC9BQ8N6N2 239 aa22.83■■□□□ 1.25
TSEN54-205ENST00000578415 CSGALNACT1Q8TDX6 532 aa22.83■■□□□ 1.25
TSEN54-205ENST00000578415 MSANTD3Q96H12 275 aa22.83■■□□□ 1.25
TSEN54-205ENST00000578415 PLIN2Q99541 437 aa22.83■■□□□ 1.25
TSEN54-205ENST00000578415 SH2B1Q9NRF2 756 aaPredicted RBP22.83■■□□□ 1.25
TSEN54-205ENST00000578415 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.83■■□□□ 1.25
TSEN54-205ENST00000578415 CACNA1BQ00975 2339 aa22.82■■□□□ 1.24
TSEN54-205ENST00000578415 NPHP3-ACAD11A0A0J9YXS1 232 aa22.82■■□□□ 1.24
TSEN54-205ENST00000578415 MTMR11A4FU01 709 aa22.82■■□□□ 1.24
TSEN54-205ENST00000578415 LACTBL1A8MY62 500 aa22.82■■□□□ 1.24
TSEN54-205ENST00000578415 CHURC1-FNTBB4DL54 471 aa22.82■■□□□ 1.24
TSEN54-205ENST00000578415 HRO43593 1189 aa22.82■■□□□ 1.24
TSEN54-205ENST00000578415 FAM189A1O60320 539 aa22.82■■□□□ 1.24
TSEN54-205ENST00000578415 EIF5BO60841 1220 aaKnown RBP22.82■■□□□ 1.24
TSEN54-205ENST00000578415 RETP07949 1114 aa22.82■■□□□ 1.24
TSEN54-205ENST00000578415 MATR3P43243 847 aaKnown RBP eCLIP22.82■■□□□ 1.24
TSEN54-205ENST00000578415 FNTBP49356 437 aa22.82■■□□□ 1.24
TSEN54-205ENST00000578415 EPHB3P54753 998 aa22.82■■□□□ 1.24
TSEN54-205ENST00000578415 NCKAP1LP55160 1127 aa22.82■■□□□ 1.24
TSEN54-205ENST00000578415 CACNB1Q02641 598 aaPredicted RBP22.82■■□□□ 1.24
TSEN54-205ENST00000578415 PPP2R3AQ06190 1150 aa22.82■■□□□ 1.24
TSEN54-205ENST00000578415 TXNDC11Q6PKC3 985 aa22.82■■□□□ 1.24
TSEN54-205ENST00000578415 Q6ZS52 159 aa22.82■■□□□ 1.24
TSEN54-205ENST00000578415 GAREM2Q75VX8 874 aa22.82■■□□□ 1.24
TSEN54-205ENST00000578415 USP37Q86T82 979 aa22.82■■□□□ 1.24
TSEN54-205ENST00000578415 ARID3BQ8IVW6 561 aaPredicted RBP22.82■■□□□ 1.24
TSEN54-205ENST00000578415 ATAD1Q8NBU5 361 aa22.82■■□□□ 1.24
TSEN54-205ENST00000578415 KCNN1Q92952 543 aa22.82■■□□□ 1.24
TSEN54-205ENST00000578415 C8orf33Q9H7E9 229 aaPredicted RBP22.82■■□□□ 1.24
TSEN54-205ENST00000578415 SLC27A5Q9Y2P5 690 aa22.82■■□□□ 1.24
TSEN54-205ENST00000578415 ACACBO00763 2458 aa22.82■■□□□ 1.24
TSEN54-205ENST00000578415 MYBPHLA2RUH7 354 aa22.81■■□□□ 1.24
TSEN54-205ENST00000578415 K7ESF4 209 aa22.81■■□□□ 1.24
TSEN54-205ENST00000578415 PAPSS2O95340 614 aaPredicted RBP22.81■■□□□ 1.24
TSEN54-205ENST00000578415 PLA2G4BP0C869 781 aa22.81■■□□□ 1.24
TSEN54-205ENST00000578415 TYMPP19971 482 aa22.81■■□□□ 1.24
TSEN54-205ENST00000578415 ALDH1A3P47895 512 aa22.81■■□□□ 1.24
TSEN54-205ENST00000578415 KPNA1P52294 538 aaPredicted RBP22.81■■□□□ 1.24
TSEN54-205ENST00000578415 ATP2C1P98194 919 aaPredicted RBP22.81■■□□□ 1.24
TSEN54-205ENST00000578415 SRSF5Q13243 272 aaKnown RBP22.81■■□□□ 1.24
TSEN54-205ENST00000578415 LRRC32Q14392 662 aa22.81■■□□□ 1.24
TSEN54-205ENST00000578415 ENOX2Q16206 610 aaKnown RBP22.81■■□□□ 1.24
TSEN54-205ENST00000578415 ARSHQ5FYA8 562 aa22.81■■□□□ 1.24
TSEN54-205ENST00000578415 OVOS1Q6IE37 1185 aa22.81■■□□□ 1.24
TSEN54-205ENST00000578415 C1orf228Q6PIY5 440 aa22.81■■□□□ 1.24
TSEN54-205ENST00000578415 DSTYKQ6XUX3 929 aa22.81■■□□□ 1.24
TSEN54-205ENST00000578415 BICD1Q96G01 975 aa22.81■■□□□ 1.24
TSEN54-205ENST00000578415 TMEM209Q96SK2 561 aa22.81■■□□□ 1.24
TSEN54-205ENST00000578415 C2orf42Q9NWW7 574 aa22.81■■□□□ 1.24
TSEN54-205ENST00000578415 KCND2Q9NZV8 630 aa22.81■■□□□ 1.24
TSEN54-205ENST00000578415 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.81■■□□□ 1.24
TSEN54-205ENST00000578415 SPECC1L-ADORA2AF8WAN1 911 aa22.8■■□□□ 1.24
TSEN54-205ENST00000578415 LRP3O75074 770 aa22.8■■□□□ 1.24
TSEN54-205ENST00000578415 SOAT2O75908 522 aa22.8■■□□□ 1.24
TSEN54-205ENST00000578415 ADRB2P07550 413 aa22.8■■□□□ 1.24
TSEN54-205ENST00000578415 CTHP32929 405 aa22.8■■□□□ 1.24
TSEN54-205ENST00000578415 SIM2Q14190 667 aaPredicted RBP22.8■■□□□ 1.24
TSEN54-205ENST00000578415 MYBPC2Q14324 1141 aa22.8■■□□□ 1.24
TSEN54-205ENST00000578415 HAUS6Q7Z4H7 955 aa22.8■■□□□ 1.24
TSEN54-205ENST00000578415 DNAJB7Q7Z6W7 309 aaPredicted RBP22.8■■□□□ 1.24
TSEN54-205ENST00000578415 KCTD17Q8N5Z5 321 aa22.8■■□□□ 1.24
TSEN54-205ENST00000578415 PSMG2Q969U7 264 aa22.8■■□□□ 1.24
TSEN54-205ENST00000578415 ZFYVE19Q96K21 471 aa22.8■■□□□ 1.24
TSEN54-205ENST00000578415 KIF2CQ99661 725 aa22.8■■□□□ 1.24
TSEN54-205ENST00000578415 TMEM119Q4V9L6 283 aa22.79■■□□□ 1.24
TSEN54-205ENST00000578415 SPATA1Q5VX52 437 aa22.79■■□□□ 1.24
TSEN54-205ENST00000578415 TTC8Q8TAM2 541 aa22.79■■□□□ 1.24
TSEN54-205ENST00000578415 NETO1Q8TDF5 533 aa22.79■■□□□ 1.24
TSEN54-205ENST00000578415 ATXN3LQ9H3M9 355 aa22.79■■□□□ 1.24
TSEN54-205ENST00000578415 SEMA4GQ9NTN9 838 aa22.79■■□□□ 1.24
TSEN54-205ENST00000578415 GTSE1Q9NYZ3 720 aa22.79■■□□□ 1.24
TSEN54-205ENST00000578415 LARSQ9P2J5 1176 aaKnown RBP22.79■■□□□ 1.24
TSEN54-205ENST00000578415 ASB3Q9Y575 518 aa22.79■■□□□ 1.24
TSEN54-205ENST00000578415 H0YCG3 227 aa22.78■■□□□ 1.24
TSEN54-205ENST00000578415 OGTO15294 1046 aa22.78■■□□□ 1.24
TSEN54-205ENST00000578415 NEFLP07196 543 aa22.78■■□□□ 1.24
TSEN54-205ENST00000578415 HOXC13P31276 330 aa22.78■■□□□ 1.24
TSEN54-205ENST00000578415 LIG4P49917 911 aa22.78■■□□□ 1.24
TSEN54-205ENST00000578415 LILRA4P59901 499 aa22.78■■□□□ 1.24
TSEN54-205ENST00000578415 KYAT1Q16773 422 aa22.78■■□□□ 1.24
TSEN54-205ENST00000578415 LONP2Q86WA8 852 aa22.78■■□□□ 1.24
TSEN54-205ENST00000578415 RALGPS2Q86X27 583 aaPredicted RBP22.78■■□□□ 1.24
TSEN54-205ENST00000578415 OR10T2Q8NGX3 314 aa22.78■■□□□ 1.24
TSEN54-205ENST00000578415 SENP8Q96LD8 212 aa22.78■■□□□ 1.24
TSEN54-205ENST00000578415 RPF1Q9H9Y2 349 aaKnown RBP22.78■■□□□ 1.24
TSEN54-205ENST00000578415 PPP4R2Q9NY27 417 aa22.78■■□□□ 1.24
TSEN54-205ENST00000578415 TBX20Q9UMR3 447 aa22.78■■□□□ 1.24
TSEN54-205ENST00000578415 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.77■■□□□ 1.24
TSEN54-205ENST00000578415 VWA3AA6NCI4 1184 aa22.77■■□□□ 1.24
TSEN54-205ENST00000578415 SLC30A4O14863 429 aa22.77■■□□□ 1.24
TSEN54-205ENST00000578415 HNRNPDLO14979 420 aaKnown RBP22.77■■□□□ 1.24
TSEN54-205ENST00000578415 XPOTO43592 962 aaKnown RBP22.77■■□□□ 1.24
TSEN54-205ENST00000578415 KRT37O76014 449 aa22.77■■□□□ 1.24
TSEN54-205ENST00000578415 PRAMEF12O95522 483 aa22.77■■□□□ 1.24
TSEN54-205ENST00000578415 PIGRP01833 764 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms