RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	CCSER1	Q9C0I3	900 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	SMG9	Q9H0W8	520 aa	Known RBP	4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	MFSD1	Q9H3U5	465 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	ST6GALNAC4	Q9H4F1	302 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	C17orf75	Q9HAS0	396 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	CYP4F11	Q9HBI6	524 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	RBM12	Q9NTZ6	932 aa	Known RBP	4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	DLL3	Q9NYJ7	618 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	GDE1	Q9NZC3	331 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	AFF4	Q9UHB7	1163 aa	Known RBP	4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	POLI	Q9UNA4	740 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	CCL26	Q9Y258	94 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	MRPS23	Q9Y3D9	190 aa	Known RBP	4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	RBM19	Q9Y4C8	960 aa	Known RBP	4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	KIAA1549L	Q6ZVL6	1849 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	MYO16	Q9Y6X6	1858 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	PTPRD	P23468	1912 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	ATG2B	Q96BY7	2078 aa		4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	CNOT1	A5YKK6	2376 aa	Known RBP	4.85	□□□□□ -1.63
PPP4R1-209	ENST00000578329	ZZEF1	O43149	2961 aa		4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	CHD6	Q8TD26	2715 aa		4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	CEP295	Q9C0D2	2601 aa		4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329		A0A1W2PRU2	124 aa		4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	HEPACAM2	A8MVW5	462 aa		4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	OGT	O15294	1046 aa		4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	HR	O43593	1189 aa		4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	NR1I2	O75469	434 aa		4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	LMNA	P02545	664 aa	Known RBP	4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	F11	P03951	625 aa		4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	CYP11A1	P05108	521 aa		4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	TYMP	P19971	482 aa		4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	CYP3A5	P20815	502 aa		4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	RPS9	P46781	194 aa	Known RBP	4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	SATB1	Q01826	763 aa		4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	PRKCQ	Q04759	706 aa		4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	TNK2	Q07912	1038 aa		4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	EHHADH	Q08426	723 aa		4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	MESP2	Q0VG99	397 aa		4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	ZRSR1	Q15695	479 aa	Known RBP	4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	ZNF528	Q3MIS6	628 aa		4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	LIN9	Q5TKA1	542 aa		4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	WSCD1	Q658N2	575 aa		4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	TPGS2	Q68CL5	300 aa		4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	MAMSTR	Q6ZN01	415 aa		4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	RTL10	Q7L3V2	364 aa		4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	ZNF720	Q7Z2F6	126 aa		4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	SFR1	Q86XK3	245 aa		4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	ARID3B	Q8IVW6	561 aa	Predicted RBP	4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	KIAA2013	Q8IYS2	634 aa		4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	TMEM87A	Q8NBN3	555 aa		4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	PLEKHO2	Q8TD55	490 aa		4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	SMARCD2	Q92925	531 aa		4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	KIF12	Q96FN5	646 aa		4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	P2RY11	Q96G91	374 aa		4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	SENP8	Q96LD8	212 aa		4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	CCDC43	Q96MW1	224 aa	Known RBP	4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	USP28	Q96RU2	1077 aa		4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	SLC46A2	Q9BY10	475 aa		4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	ZCWPW1	Q9H0M4	648 aa		4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	EPC1	Q9H2F5	836 aa		4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	CHRD	Q9H2X0	955 aa		4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	PLEKHA5	Q9HAU0	1116 aa		4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	TRPV5	Q9NQA5	729 aa		4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	HPS4	Q9NQG7	708 aa		4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	ODF2L	Q9ULJ1	636 aa		4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	NOL7	Q9UMY1	257 aa	Known RBP	4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	MTMR6	Q9Y217	621 aa		4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	AKAP13	Q12802	2813 aa		4.84	□□□□□ -1.63
PPP4R1-209	ENST00000578329	SPDYE4	A6NLX3	237 aa		4.83	□□□□□ -1.64
PPP4R1-209	ENST00000578329	SLC38A8	A6NNN8	435 aa		4.83	□□□□□ -1.64
PPP4R1-209	ENST00000578329	GABRD	O14764	452 aa		4.83	□□□□□ -1.64
PPP4R1-209	ENST00000578329	CLDN3	O15551	220 aa		4.83	□□□□□ -1.64
PPP4R1-209	ENST00000578329	TGFB1I1	O43294	461 aa		4.83	□□□□□ -1.64
PPP4R1-209	ENST00000578329	TRAK2	O60296	914 aa		4.83	□□□□□ -1.64
PPP4R1-209	ENST00000578329	ATP2C2	O75185	946 aa		4.83	□□□□□ -1.64
PPP4R1-209	ENST00000578329	XYLB	O75191	536 aa		4.83	□□□□□ -1.64
PPP4R1-209	ENST00000578329	MYL4	P12829	197 aa		4.83	□□□□□ -1.64
PPP4R1-209	ENST00000578329	SYT1	P21579	422 aa		4.83	□□□□□ -1.64
PPP4R1-209	ENST00000578329	CCNE1	P24864	410 aa		4.83	□□□□□ -1.64
PPP4R1-209	ENST00000578329	CASP1	P29466	404 aa		4.83	□□□□□ -1.64
PPP4R1-209	ENST00000578329	MARCKS	P29966	332 aa	Predicted RBP	4.83	□□□□□ -1.64
PPP4R1-209	ENST00000578329	GDI1	P31150	447 aa		4.83	□□□□□ -1.64
PPP4R1-209	ENST00000578329	MCM4	P33991	863 aa		4.83	□□□□□ -1.64
PPP4R1-209	ENST00000578329	DDIT3	P35638	169 aa		4.83	□□□□□ -1.64
PPP4R1-209	ENST00000578329	CACNA2D1	P54289	1103 aa		4.83	□□□□□ -1.64
PPP4R1-209	ENST00000578329	CYP4F8	P98187	520 aa		4.83	□□□□□ -1.64
PPP4R1-209	ENST00000578329	CSTF1	Q05048	431 aa	Known RBP	4.83	□□□□□ -1.64
PPP4R1-209	ENST00000578329	PKP1	Q13835	747 aa		4.83	□□□□□ -1.64
PPP4R1-209	ENST00000578329	CCIN	Q13939	588 aa		4.83	□□□□□ -1.64
PPP4R1-209	ENST00000578329	DHX8	Q14562	1220 aa	Known RBP	4.83	□□□□□ -1.64
PPP4R1-209	ENST00000578329	UBXN2B	Q14CS0	331 aa		4.83	□□□□□ -1.64
PPP4R1-209	ENST00000578329	SDHAF4	Q5VUM1	108 aa		4.83	□□□□□ -1.64
PPP4R1-209	ENST00000578329	MCTP1	Q6DN14	999 aa		4.83	□□□□□ -1.64
PPP4R1-209	ENST00000578329	OVOS1	Q6IE37	1185 aa		4.83	□□□□□ -1.64
PPP4R1-209	ENST00000578329	FSTL4	Q6MZW2	842 aa		4.83	□□□□□ -1.64
PPP4R1-209	ENST00000578329	ZNF280D	Q6N043	979 aa		4.83	□□□□□ -1.64
PPP4R1-209	ENST00000578329	PDXDC1	Q6P996	788 aa		4.83	□□□□□ -1.64

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