RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 AIPL1Q9NZN9 384 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 VPS51Q9UID3 782 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 INSL6Q9Y581 213 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 HEY1Q9Y5J3 304 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 ADAMTS13Q76LX8 1427 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 DDTLA6NHG4 134 aaPredicted RBP3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 C3orf70A6NLC5 250 aaPredicted RBP3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 GOLGA8MH3BSY2 632 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 KPNA3O00505 521 aaPredicted RBP3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 KIF3CO14782 793 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 OGTO15294 1046 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 DUSP11O75319 330 aaKnown RBP3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 NDUFS3O75489 264 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 TJP3O95049 919 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 CFIP05156 583 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 PFKMP08237 780 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 CSH1P0DML2 217 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 CSH2P0DML3 217 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 NCAM1P13591 858 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 FGFR2P21802 821 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 CDC25CP30307 473 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 CHKAP35790 457 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 MRPS6P82932 125 aaKnown RBP3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 ATP11AP98196 1134 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 NCOA4Q13772 614 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 KNOP1Q1ED39 458 aaKnown RBP3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 ZNF658Q5TYW1 1059 aaPredicted RBP3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 HLA-DQA1Q5Y7H0 255 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 CAPN12Q6ZSI9 719 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 CDKL3Q8IVW4 592 aaPredicted RBP3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 PDIK1LQ8N165 341 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 MSL3Q8N5Y2 521 aaKnown RBP3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 MTMR14Q8NCE2 650 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 RAD54LQ92698 747 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 TMA16Q96EY4 203 aaKnown RBP3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 GMCL1Q96IK5 515 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 UROC1Q96N76 676 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 CLIC6Q96NY7 704 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 USP28Q96RU2 1077 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 TCF25Q9BQ70 676 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 PDCD2LQ9BRP1 358 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 FDXACB1Q9BRP7 624 aaPredicted RBP3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 WDR18Q9BV38 432 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 TMEM51Q9NW97 253 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 SUN2Q9UH99 717 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 GPN3Q9UHW5 284 aaPredicted RBP3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 CDY2AQ9Y6F7 541 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 ESPNB1AK53 854 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 RASGRF2O14827 1237 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 STX7O15400 261 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 SLC26A4O43511 780 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 TDP2O95551 362 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 ADH1CP00326 375 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 PLS3P13797 630 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 DARSP14868 501 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 TNNI3P19429 210 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 ITGAXP20702 1163 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 KELP23276 732 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 YWHAQP27348 245 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 GLUD2P49448 558 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 RHOAP61586 193 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 IL1RL1Q01638 556 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 EFEMP1Q12805 493 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 GRSF1Q12849 480 aaKnown RBP eCLIP3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 PDIA5Q14554 519 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 TTLL9Q3SXZ7 439 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 C8orf34Q49A92 452 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 GKAP1Q5VSY0 366 aaPredicted RBP3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 PTRHD1Q6GMV3 140 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 SLC27A1Q6PCB7 646 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 FBXL19Q6PCT2 694 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 LRRC8DQ7L1W4 858 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 ZNF589Q86UQ0 364 aaPredicted RBP3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 ARHGAP24Q8N264 748 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 ARMC2Q8NEN0 867 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 CFAP61Q8NHU2 1237 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 SLC26A7Q8TE54 656 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 MORC4Q8TE76 937 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 SLC20A1Q8WUM9 679 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 CLMNQ96JQ2 1002 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 ZNF512BQ96KM6 892 aaPredicted RBP3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 PRIMPOLQ96LW4 560 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 C11orf70Q9BRQ4 267 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 NUP85Q9BW27 656 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 TARS2Q9BW92 718 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 IRF2BPLQ9H1B7 796 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 NEUROG2Q9H2A3 272 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 KDM4CQ9H3R0 1056 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 ARFGAP3Q9NP61 516 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 CASS4Q9NQ75 786 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 FAM49BQ9NUQ9 324 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 SMPD4Q9NXE4 827 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 CNOT8Q9UFF9 292 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 PCSK1NQ9UHG2 260 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 APPL1Q9UKG1 709 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 UMODL1Q5DID0 1318 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 WDR19Q8NEZ3 1342 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 MYOM1P52179 1685 aa3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 PTPRZ1P23471 2315 aaPredicted RBP3.08□□□□□ -1.92
SMCHD1-203ENST00000577880 RIC1Q4ADV7 1423 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms