RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 UROC1Q96N76 676 aa12□□□□□ -0.49
CDK5RAP3-204ENST00000577664 MRPL9Q9BYD2 267 aaKnown RBP12□□□□□ -0.49
CDK5RAP3-204ENST00000577664 VPS16Q9H269 839 aa12□□□□□ -0.49
CDK5RAP3-204ENST00000577664 FAM124BQ9H5Z6 455 aaPredicted RBP12□□□□□ -0.49
CDK5RAP3-204ENST00000577664 PLCB1Q9NQ66 1216 aa12□□□□□ -0.49
CDK5RAP3-204ENST00000577664 DPP3Q9NY33 737 aa12□□□□□ -0.49
CDK5RAP3-204ENST00000577664 KLK14Q9P0G3 267 aa12□□□□□ -0.49
CDK5RAP3-204ENST00000577664 SIX4Q9UIU6 781 aa12□□□□□ -0.49
CDK5RAP3-204ENST00000577664 FBXL5Q9UKA1 691 aa12□□□□□ -0.49
CDK5RAP3-204ENST00000577664 LRFN2Q9ULH4 789 aa12□□□□□ -0.49
CDK5RAP3-204ENST00000577664 PLAGL2Q9UPG8 496 aa12□□□□□ -0.49
CDK5RAP3-204ENST00000577664 DAAM1Q9Y4D1 1078 aa12□□□□□ -0.49
CDK5RAP3-204ENST00000577664 INSL6Q9Y581 213 aa12□□□□□ -0.49
CDK5RAP3-204ENST00000577664 ATG2AQ2TAZ0 1938 aa11.99□□□□□ -0.49
CDK5RAP3-204ENST00000577664 TMEM189-UBE2V1I3L0A0 370 aa11.99□□□□□ -0.49
CDK5RAP3-204ENST00000577664 RBAK-RBAKDNI3L0D1 243 aa11.99□□□□□ -0.49
CDK5RAP3-204ENST00000577664 TBX10O75333 385 aa11.99□□□□□ -0.49
CDK5RAP3-204ENST00000577664 VNN1O95497 513 aa11.99□□□□□ -0.49
CDK5RAP3-204ENST00000577664 TNNC2P02585 160 aa11.99□□□□□ -0.49
CDK5RAP3-204ENST00000577664 TRIM49P0CI25 452 aa11.99□□□□□ -0.49
CDK5RAP3-204ENST00000577664 TRIM49CP0CI26 452 aa11.99□□□□□ -0.49
CDK5RAP3-204ENST00000577664 FGFR1P11362 822 aa11.99□□□□□ -0.49
CDK5RAP3-204ENST00000577664 GCLMP48507 274 aa11.99□□□□□ -0.49
CDK5RAP3-204ENST00000577664 MXI1P50539 228 aa11.99□□□□□ -0.49
CDK5RAP3-204ENST00000577664 CETN1Q12798 172 aa11.99□□□□□ -0.49
CDK5RAP3-204ENST00000577664 TUSC3Q13454 348 aa11.99□□□□□ -0.49
CDK5RAP3-204ENST00000577664 UPP1Q16831 310 aa11.99□□□□□ -0.49
CDK5RAP3-204ENST00000577664 SGSM1Q2NKQ1 1148 aa11.99□□□□□ -0.49
CDK5RAP3-204ENST00000577664 DCAF17Q5H9S7 520 aaPredicted RBP11.99□□□□□ -0.49
CDK5RAP3-204ENST00000577664 TCERG1LQ5VWI1 586 aa11.99□□□□□ -0.49
CDK5RAP3-204ENST00000577664 COLGALT2Q8IYK4 626 aa11.99□□□□□ -0.49
CDK5RAP3-204ENST00000577664 CMTR2Q8IYT2 770 aaKnown RBP11.99□□□□□ -0.49
CDK5RAP3-204ENST00000577664 FBXL13Q8NEE6 735 aa11.99□□□□□ -0.49
CDK5RAP3-204ENST00000577664 URGCPQ8TCY9 931 aa11.99□□□□□ -0.49
CDK5RAP3-204ENST00000577664 FAM212AQ96EL1 285 aa11.99□□□□□ -0.49
CDK5RAP3-204ENST00000577664 MSLNLQ96KJ4 702 aa11.99□□□□□ -0.49
CDK5RAP3-204ENST00000577664 RPS6KC1Q96S38 1066 aa11.99□□□□□ -0.49
CDK5RAP3-204ENST00000577664 APOL6Q9BWW8 343 aa11.99□□□□□ -0.49
CDK5RAP3-204ENST00000577664 XYLT2Q9H1B5 865 aa11.99□□□□□ -0.49
CDK5RAP3-204ENST00000577664 TBC1D13Q9NVG8 400 aa11.99□□□□□ -0.49
CDK5RAP3-204ENST00000577664 RAB20Q9NX57 234 aa11.99□□□□□ -0.49
CDK5RAP3-204ENST00000577664 TAB2Q9NYJ8 693 aa11.99□□□□□ -0.49
CDK5RAP3-204ENST00000577664 IFNKQ9P0W0 207 aa11.99□□□□□ -0.49
CDK5RAP3-204ENST00000577664 CD207Q9UJ71 328 aa11.99□□□□□ -0.49
CDK5RAP3-204ENST00000577664 SIK3Q9Y2K2 1263 aa11.99□□□□□ -0.49
CDK5RAP3-204ENST00000577664 SPTBN2O15020 2390 aa11.99□□□□□ -0.49
CDK5RAP3-204ENST00000577664 GPR179Q6PRD1 2367 aa11.99□□□□□ -0.49
CDK5RAP3-204ENST00000577664 FNDC1Q4ZHG4 1894 aaPredicted RBP11.98□□□□□ -0.49
CDK5RAP3-204ENST00000577664 ITIH6Q6UXX5 1313 aa11.98□□□□□ -0.49
CDK5RAP3-204ENST00000577664 TEX33O43247 280 aa11.98□□□□□ -0.49
CDK5RAP3-204ENST00000577664 EFEMP2O95967 443 aa11.98□□□□□ -0.49
CDK5RAP3-204ENST00000577664 ASS1P00966 412 aaKnown RBP11.98□□□□□ -0.49
CDK5RAP3-204ENST00000577664 PDGFBP01127 241 aaPredicted RBP11.98□□□□□ -0.49
CDK5RAP3-204ENST00000577664 TPM3P06753 285 aa11.98□□□□□ -0.49
CDK5RAP3-204ENST00000577664 TMEM191BP0C7N4 346 aa11.98□□□□□ -0.49
CDK5RAP3-204ENST00000577664 PON1P27169 355 aa11.98□□□□□ -0.49
CDK5RAP3-204ENST00000577664 PNPLA4P41247 253 aa11.98□□□□□ -0.49
CDK5RAP3-204ENST00000577664 AARSP49588 968 aaKnown RBP eCLIP11.98□□□□□ -0.49
CDK5RAP3-204ENST00000577664 SCNN1GP51170 649 aa11.98□□□□□ -0.49
CDK5RAP3-204ENST00000577664 RBP5P82980 135 aa11.98□□□□□ -0.49
CDK5RAP3-204ENST00000577664 TFAMQ00059 246 aaKnown RBP11.98□□□□□ -0.49
CDK5RAP3-204ENST00000577664 SOX4Q06945 474 aaPredicted RBP11.98□□□□□ -0.49
CDK5RAP3-204ENST00000577664 HYAL1Q12794 435 aa11.98□□□□□ -0.49
CDK5RAP3-204ENST00000577664 GPM6BQ13491 265 aa11.98□□□□□ -0.49
CDK5RAP3-204ENST00000577664 CLUL1Q15846 466 aa11.98□□□□□ -0.49
CDK5RAP3-204ENST00000577664 EXOC3L4Q17RC7 722 aa11.98□□□□□ -0.49
CDK5RAP3-204ENST00000577664 FIGNQ5HY92 759 aa11.98□□□□□ -0.49
CDK5RAP3-204ENST00000577664 FKBP15Q5T1M5 1219 aa11.98□□□□□ -0.49
CDK5RAP3-204ENST00000577664 C9orf57Q5W0N0 161 aa11.98□□□□□ -0.49
CDK5RAP3-204ENST00000577664 DCLRE1AQ6PJP8 1040 aa11.98□□□□□ -0.49
CDK5RAP3-204ENST00000577664 GBP6Q6ZN66 633 aa11.98□□□□□ -0.49
CDK5RAP3-204ENST00000577664 LIMS2Q7Z4I7 341 aa11.98□□□□□ -0.49
CDK5RAP3-204ENST00000577664 CREBRFQ8IUR6 639 aa11.98□□□□□ -0.49
CDK5RAP3-204ENST00000577664 ABI1Q8IZP0 508 aa11.98□□□□□ -0.49
CDK5RAP3-204ENST00000577664 TMEM105Q8N8V8 129 aa11.98□□□□□ -0.49
CDK5RAP3-204ENST00000577664 HELQQ8TDG4 1101 aa11.98□□□□□ -0.49
CDK5RAP3-204ENST00000577664 TAS1R2Q8TE23 839 aa11.98□□□□□ -0.49
CDK5RAP3-204ENST00000577664 JAKMIP2Q96AA8 810 aa11.98□□□□□ -0.49
CDK5RAP3-204ENST00000577664 IQCDQ96DY2 449 aa11.98□□□□□ -0.49
CDK5RAP3-204ENST00000577664 FAM81BQ96LP2 452 aa11.98□□□□□ -0.49
CDK5RAP3-204ENST00000577664 TMEM175Q9BSA9 504 aa11.98□□□□□ -0.49
CDK5RAP3-204ENST00000577664 EDEM3Q9BZQ6 932 aa11.98□□□□□ -0.49
CDK5RAP3-204ENST00000577664 XPO4Q9C0E2 1151 aaKnown RBP11.98□□□□□ -0.49
CDK5RAP3-204ENST00000577664 MTMR12Q9C0I1 747 aa11.98□□□□□ -0.49
CDK5RAP3-204ENST00000577664 CWH43Q9H720 699 aa11.98□□□□□ -0.49
CDK5RAP3-204ENST00000577664 GDAP2Q9NXN4 497 aa11.98□□□□□ -0.49
CDK5RAP3-204ENST00000577664 DDHD2O94830 711 aa11.97□□□□□ -0.49
CDK5RAP3-204ENST00000577664 POMCP01189 267 aa11.97□□□□□ -0.49
CDK5RAP3-204ENST00000577664 LINC00271P0C7V0 271 aa11.97□□□□□ -0.49
CDK5RAP3-204ENST00000577664 CDC25BP30305 580 aa11.97□□□□□ -0.49
CDK5RAP3-204ENST00000577664 ZNF75DP51815 510 aa11.97□□□□□ -0.49
CDK5RAP3-204ENST00000577664 UBXN1Q04323 297 aa11.97□□□□□ -0.49
CDK5RAP3-204ENST00000577664 NCOA4Q13772 614 aa11.97□□□□□ -0.49
CDK5RAP3-204ENST00000577664 CD300LGQ6UXG3 332 aa11.97□□□□□ -0.49
CDK5RAP3-204ENST00000577664 DPH6Q7L8W6 267 aa11.97□□□□□ -0.49
CDK5RAP3-204ENST00000577664 ZNF280BQ86YH2 543 aa11.97□□□□□ -0.49
CDK5RAP3-204ENST00000577664 RNF169Q8NCN4 708 aa11.97□□□□□ -0.49
CDK5RAP3-204ENST00000577664 SEMA4DQ92854 862 aa11.97□□□□□ -0.49
CDK5RAP3-204ENST00000577664 CLP1Q92989 425 aaKnown RBP11.97□□□□□ -0.49
CDK5RAP3-204ENST00000577664 C18orf25Q96B23 403 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms