RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 TNNC2P02585 160 aa8.51□□□□□ -1.05
CCDC40-215ENST00000576033 IL9P15248 144 aa8.51□□□□□ -1.05
CCDC40-215ENST00000576033 SP100P23497 879 aaPredicted RBP8.51□□□□□ -1.05
CCDC40-215ENST00000576033 KLRC2P26717 231 aa8.51□□□□□ -1.05
CCDC40-215ENST00000576033 RPL9P32969 192 aaKnown RBP8.51□□□□□ -1.05
CCDC40-215ENST00000576033 OR1D2P34982 312 aa8.51□□□□□ -1.05
CCDC40-215ENST00000576033 NDUFV1P49821 464 aa8.51□□□□□ -1.05
CCDC40-215ENST00000576033 TAF6P49848 677 aa8.51□□□□□ -1.05
CCDC40-215ENST00000576033 VAMP7P51809 220 aa8.51□□□□□ -1.05
CCDC40-215ENST00000576033 ROR1Q01973 937 aa8.51□□□□□ -1.05
CCDC40-215ENST00000576033 APBA1Q02410 837 aa8.51□□□□□ -1.05
CCDC40-215ENST00000576033 LRRC63Q05C16 580 aa8.51□□□□□ -1.05
CCDC40-215ENST00000576033 BIRC3Q13489 604 aa8.51□□□□□ -1.05
CCDC40-215ENST00000576033 COL19A1Q14993 1142 aa8.51□□□□□ -1.05
CCDC40-215ENST00000576033 CTC1Q2NKJ3 1217 aa8.51□□□□□ -1.05
CCDC40-215ENST00000576033 EDRF1Q3B7T1 1238 aa8.51□□□□□ -1.05
CCDC40-215ENST00000576033 CT47A1Q5JQC4 288 aaPredicted RBP8.51□□□□□ -1.05
CCDC40-215ENST00000576033 TCERG1LQ5VWI1 586 aa8.51□□□□□ -1.05
CCDC40-215ENST00000576033 WSCD1Q658N2 575 aa8.51□□□□□ -1.05
CCDC40-215ENST00000576033 KIAA1841Q6NSI8 718 aa8.51□□□□□ -1.05
CCDC40-215ENST00000576033 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.51□□□□□ -1.05
CCDC40-215ENST00000576033 C15orf39Q6ZRI6 1047 aa8.51□□□□□ -1.05
CCDC40-215ENST00000576033 IRF2BP1Q8IU81 584 aa8.51□□□□□ -1.05
CCDC40-215ENST00000576033 CD302Q8IX05 232 aa8.51□□□□□ -1.05
CCDC40-215ENST00000576033 PDCL2Q8N4E4 241 aa8.51□□□□□ -1.05
CCDC40-215ENST00000576033 EFHBQ8N7U6 833 aa8.51□□□□□ -1.05
CCDC40-215ENST00000576033 SLC22A17Q8WUG5 538 aa8.51□□□□□ -1.05
CCDC40-215ENST00000576033 KBTBD7Q8WVZ9 684 aa8.51□□□□□ -1.05
CCDC40-215ENST00000576033 PIK3R5Q8WYR1 880 aa8.51□□□□□ -1.05
CCDC40-215ENST00000576033 DHTKD1Q96HY7 919 aaPredicted RBP8.51□□□□□ -1.05
CCDC40-215ENST00000576033 CNOT6LQ96LI5 555 aaKnown RBP8.51□□□□□ -1.05
CCDC40-215ENST00000576033 NECAB3Q96P71 396 aaPredicted RBP8.51□□□□□ -1.05
CCDC40-215ENST00000576033 TSG101Q99816 390 aa8.51□□□□□ -1.05
CCDC40-215ENST00000576033 MRPL45Q9BRJ2 306 aaKnown RBP8.51□□□□□ -1.05
CCDC40-215ENST00000576033 SRRTQ9BXP5 876 aaKnown RBP8.51□□□□□ -1.05
CCDC40-215ENST00000576033 RHOBTB2Q9BYZ6 727 aa8.51□□□□□ -1.05
CCDC40-215ENST00000576033 HSD3B7Q9H2F3 369 aa8.51□□□□□ -1.05
CCDC40-215ENST00000576033 MAN1C1Q9NR34 630 aa8.51□□□□□ -1.05
CCDC40-215ENST00000576033 MRPL17Q9NRX2 175 aaKnown RBP8.51□□□□□ -1.05
CCDC40-215ENST00000576033 TMLHEQ9NVH6 421 aa8.51□□□□□ -1.05
CCDC40-215ENST00000576033 LMCD1Q9NZU5 365 aa8.51□□□□□ -1.05
CCDC40-215ENST00000576033 CGNQ9P2M7 1197 aaKnown RBP8.51□□□□□ -1.05
CCDC40-215ENST00000576033 MTRRQ9UBK8 725 aa8.51□□□□□ -1.05
CCDC40-215ENST00000576033 ITGA11Q9UKX5 1188 aa8.51□□□□□ -1.05
CCDC40-215ENST00000576033 PCDHB8Q9UN66 801 aa8.51□□□□□ -1.05
CCDC40-215ENST00000576033 FRMD4BQ9Y2L6 1034 aa8.51□□□□□ -1.05
CCDC40-215ENST00000576033 SNX9Q9Y5X1 595 aa8.51□□□□□ -1.05
CCDC40-215ENST00000576033 OBSL1O75147 1896 aa8.51□□□□□ -1.05
CCDC40-215ENST00000576033 NOTCH4Q99466 2003 aa8.51□□□□□ -1.05
CCDC40-215ENST00000576033 TRIOO75962 3097 aa8.5□□□□□ -1.05
CCDC40-215ENST00000576033 KPNA7A9QM74 516 aa8.5□□□□□ -1.05
CCDC40-215ENST00000576033 KIAA0391O15091 583 aaKnown RBP8.5□□□□□ -1.05
CCDC40-215ENST00000576033 TBC1D4O60343 1298 aa8.5□□□□□ -1.05
CCDC40-215ENST00000576033 SEC24AO95486 1093 aa8.5□□□□□ -1.05
CCDC40-215ENST00000576033 ADCY5O95622 1261 aa8.5□□□□□ -1.05
CCDC40-215ENST00000576033 CALCAP01258 141 aa8.5□□□□□ -1.05
CCDC40-215ENST00000576033 HLA-DRAP01903 254 aa8.5□□□□□ -1.05
CCDC40-215ENST00000576033 EPB41P11171 864 aaKnown RBP8.5□□□□□ -1.05
CCDC40-215ENST00000576033 CDC25BP30305 580 aa8.5□□□□□ -1.05
CCDC40-215ENST00000576033 PSMC2P35998 433 aaKnown RBP8.5□□□□□ -1.05
CCDC40-215ENST00000576033 PIK3CAP42336 1068 aa8.5□□□□□ -1.05
CCDC40-215ENST00000576033 CDH8P55286 799 aa8.5□□□□□ -1.05
CCDC40-215ENST00000576033 PSMC1P62191 440 aaKnown RBP8.5□□□□□ -1.05
CCDC40-215ENST00000576033 SNRPFP62306 86 aaKnown RBP8.5□□□□□ -1.05
CCDC40-215ENST00000576033 CLDN10P78369 228 aa8.5□□□□□ -1.05
CCDC40-215ENST00000576033 ADAM15Q13444 863 aa8.5□□□□□ -1.05
CCDC40-215ENST00000576033 STIM1Q13586 685 aa8.5□□□□□ -1.05
CCDC40-215ENST00000576033 NCOA4Q13772 614 aa8.5□□□□□ -1.05
CCDC40-215ENST00000576033 PTPN21Q16825 1174 aa8.5□□□□□ -1.05
CCDC40-215ENST00000576033 DUOXA2Q1HG44 320 aa8.5□□□□□ -1.05
CCDC40-215ENST00000576033 SOWAHAQ2M3V2 549 aa8.5□□□□□ -1.05
CCDC40-215ENST00000576033 ZACNQ401N2 412 aa8.5□□□□□ -1.05
CCDC40-215ENST00000576033 SV2CQ496J9 727 aa8.5□□□□□ -1.05
CCDC40-215ENST00000576033 CTXN3Q4LDR2 81 aa8.5□□□□□ -1.05
CCDC40-215ENST00000576033 RARS2Q5T160 578 aaKnown RBP8.5□□□□□ -1.05
CCDC40-215ENST00000576033 SYCE2Q6PIF2 218 aa8.5□□□□□ -1.05
CCDC40-215ENST00000576033 RNF19BQ6ZMZ0 732 aa8.5□□□□□ -1.05
CCDC40-215ENST00000576033 SV2AQ7L0J3 742 aa8.5□□□□□ -1.05
CCDC40-215ENST00000576033 ST13P5Q8NFI4 369 aaPredicted RBP8.5□□□□□ -1.05
CCDC40-215ENST00000576033 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.5□□□□□ -1.05
CCDC40-215ENST00000576033 TMEM174Q8WUU8 243 aa8.5□□□□□ -1.05
CCDC40-215ENST00000576033 SLC35C1Q96A29 364 aa8.5□□□□□ -1.05
CCDC40-215ENST00000576033 PABPC5Q96DU9 382 aaKnown RBP8.5□□□□□ -1.05
CCDC40-215ENST00000576033 HPDLQ96IR7 371 aa8.5□□□□□ -1.05
CCDC40-215ENST00000576033 MSLNLQ96KJ4 702 aa8.5□□□□□ -1.05
CCDC40-215ENST00000576033 ARID3AQ99856 593 aa8.5□□□□□ -1.05
CCDC40-215ENST00000576033 NAT10Q9H0A0 1025 aaKnown RBP8.5□□□□□ -1.05
CCDC40-215ENST00000576033 DPEP3Q9H4B8 488 aa8.5□□□□□ -1.05
CCDC40-215ENST00000576033 RXFP1Q9HBX9 757 aa8.5□□□□□ -1.05
CCDC40-215ENST00000576033 KIAA1586Q9HCI6 787 aa8.5□□□□□ -1.05
CCDC40-215ENST00000576033 NGRNQ9NPE2 291 aaKnown RBP8.5□□□□□ -1.05
CCDC40-215ENST00000576033 SAMSN1Q9NSI8 373 aaKnown RBP8.5□□□□□ -1.05
CCDC40-215ENST00000576033 NXF1Q9UBU9 619 aaKnown RBP8.5□□□□□ -1.05
CCDC40-215ENST00000576033 RWDD2AQ9UIY3 292 aa8.5□□□□□ -1.05
CCDC40-215ENST00000576033 FBXL5Q9UKA1 691 aa8.5□□□□□ -1.05
CCDC40-215ENST00000576033 BDP1A6H8Y1 2624 aa8.5□□□□□ -1.05
CCDC40-215ENST00000576033 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.49□□□□□ -1.05
CCDC40-215ENST00000576033 CETN3O15182 167 aa8.49□□□□□ -1.05
CCDC40-215ENST00000576033 SLC16A3O15427 465 aaKnown RBP8.49□□□□□ -1.05
CCDC40-215ENST00000576033 XPOTO43592 962 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms