RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 OVOS1Q6IE37 1185 aa14.64□□□□□ -0.07
CIITA-210ENST00000575513 METTL23Q86XA0 190 aa14.64□□□□□ -0.07
CIITA-210ENST00000575513 SMARCE1Q969G3 411 aa14.64□□□□□ -0.07
CIITA-210ENST00000575513 ZNF707Q96C28 371 aaPredicted RBP14.64□□□□□ -0.07
CIITA-210ENST00000575513 CGRRF1Q99675 332 aa14.64□□□□□ -0.07
CIITA-210ENST00000575513 MTMR12Q9C0I1 747 aa14.64□□□□□ -0.07
CIITA-210ENST00000575513 POMKQ9H5K3 350 aa14.64□□□□□ -0.07
CIITA-210ENST00000575513 WDR6Q9NNW5 1121 aaKnown RBP14.64□□□□□ -0.07
CIITA-210ENST00000575513 AFF4Q9UHB7 1163 aaKnown RBP14.64□□□□□ -0.07
CIITA-210ENST00000575513 AGAP1Q9UPQ3 857 aa14.64□□□□□ -0.07
CIITA-210ENST00000575513 R3HCC1Q9Y3T6 440 aaKnown RBP14.64□□□□□ -0.07
CIITA-210ENST00000575513 PCDHA5Q9Y5H7 936 aa14.64□□□□□ -0.07
CIITA-210ENST00000575513 VWA8A3KMH1 1905 aa14.63□□□□□ -0.07
CIITA-210ENST00000575513 WDR27A2RRH5 827 aa14.63□□□□□ -0.07
CIITA-210ENST00000575513 XYLBO75191 536 aa14.63□□□□□ -0.07
CIITA-210ENST00000575513 C8AP07357 584 aa14.63□□□□□ -0.07
CIITA-210ENST00000575513 TNNI1P19237 187 aa14.63□□□□□ -0.07
CIITA-210ENST00000575513 ELF1P32519 619 aa14.63□□□□□ -0.07
CIITA-210ENST00000575513 MCCD1P59942 119 aaPredicted RBP14.63□□□□□ -0.07
CIITA-210ENST00000575513 GPR17Q13304 367 aa14.63□□□□□ -0.07
CIITA-210ENST00000575513 EDRF1Q3B7T1 1238 aa14.63□□□□□ -0.07
CIITA-210ENST00000575513 PPM1LQ5SGD2 360 aa14.63□□□□□ -0.07
CIITA-210ENST00000575513 DPH6Q7L8W6 267 aa14.63□□□□□ -0.07
CIITA-210ENST00000575513 TRAPPC11Q7Z392 1133 aa14.63□□□□□ -0.07
CIITA-210ENST00000575513 THEM5Q8N1Q8 247 aa14.63□□□□□ -0.07
CIITA-210ENST00000575513 TMEM86AQ8N2M4 240 aa14.63□□□□□ -0.07
CIITA-210ENST00000575513 PLCD3Q8N3E9 789 aa14.63□□□□□ -0.07
CIITA-210ENST00000575513 OR5B17Q8NGF7 314 aa14.63□□□□□ -0.07
CIITA-210ENST00000575513 PARD3BQ8TEW8 1205 aa14.63□□□□□ -0.07
CIITA-210ENST00000575513 SMG7Q92540 1137 aaKnown RBP14.63□□□□□ -0.07
CIITA-210ENST00000575513 RPGRIP1Q96KN7 1286 aa14.63□□□□□ -0.07
CIITA-210ENST00000575513 HSFX1Q9UBD0 423 aa14.63□□□□□ -0.07
CIITA-210ENST00000575513 SIX4Q9UIU6 781 aa14.63□□□□□ -0.07
CIITA-210ENST00000575513 FRMD4BQ9Y2L6 1034 aa14.63□□□□□ -0.07
CIITA-210ENST00000575513 TIMM13Q9Y5L4 95 aaPredicted RBP14.63□□□□□ -0.07
CIITA-210ENST00000575513 C5orf42Q9H799 3197 aa14.62□□□□□ -0.07
CIITA-210ENST00000575513 PI4K2BG5E9Z4 385 aa14.62□□□□□ -0.07
CIITA-210ENST00000575513 IKBKBO14920 756 aa14.62□□□□□ -0.07
CIITA-210ENST00000575513 FAM163BP0C2L3 166 aa14.62□□□□□ -0.07
CIITA-210ENST00000575513 DLATP10515 647 aaKnown RBP14.62□□□□□ -0.07
CIITA-210ENST00000575513 ALADP13716 330 aa14.62□□□□□ -0.07
CIITA-210ENST00000575513 PPP1R2P41236 205 aa14.62□□□□□ -0.07
CIITA-210ENST00000575513 SMARCB1Q12824 385 aa14.62□□□□□ -0.07
CIITA-210ENST00000575513 ZCWPW2Q504Y3 356 aa14.62□□□□□ -0.07
CIITA-210ENST00000575513 OTOP3Q7RTS5 596 aa14.62□□□□□ -0.07
CIITA-210ENST00000575513 ZDHHC14Q8IZN3 488 aa14.62□□□□□ -0.07
CIITA-210ENST00000575513 TOP6BLQ8N6T0 577 aa14.62□□□□□ -0.07
CIITA-210ENST00000575513 SLC7A14Q8TBB6 771 aa14.62□□□□□ -0.07
CIITA-210ENST00000575513 TMC2Q8TDI7 906 aa14.62□□□□□ -0.07
CIITA-210ENST00000575513 CCDC127Q96BQ5 260 aa14.62□□□□□ -0.07
CIITA-210ENST00000575513 ACSF2Q96CM8 615 aaPredicted RBP14.62□□□□□ -0.07
CIITA-210ENST00000575513 GZF1Q9H116 711 aaPredicted RBP14.62□□□□□ -0.07
CIITA-210ENST00000575513 PIDD1Q9HB75 910 aa14.62□□□□□ -0.07
CIITA-210ENST00000575513 PTPRJQ12913 1337 aa14.62□□□□□ -0.07
CIITA-210ENST00000575513 ANK1P16157 1881 aa14.61□□□□□ -0.07
CIITA-210ENST00000575513 HUS1O60921 280 aa14.61□□□□□ -0.07
CIITA-210ENST00000575513 STAU1O95793 577 aaKnown RBP14.61□□□□□ -0.07
CIITA-210ENST00000575513 KRT19P08727 400 aa14.61□□□□□ -0.07
CIITA-210ENST00000575513 WEE2P0C1S8 567 aa14.61□□□□□ -0.07
CIITA-210ENST00000575513 NR2F2P24468 414 aa14.61□□□□□ -0.07
CIITA-210ENST00000575513 ATICP31939 592 aa14.61□□□□□ -0.07
CIITA-210ENST00000575513 PRCPP42785 496 aa14.61□□□□□ -0.07
CIITA-210ENST00000575513 ARPP19P56211 112 aa14.61□□□□□ -0.07
CIITA-210ENST00000575513 ADAM9Q13443 819 aa14.61□□□□□ -0.07
CIITA-210ENST00000575513 WSCD1Q658N2 575 aa14.61□□□□□ -0.07
CIITA-210ENST00000575513 LMBRD2Q68DH5 695 aaPredicted RBP14.61□□□□□ -0.07
CIITA-210ENST00000575513 CENPPQ6IPU0 288 aa14.61□□□□□ -0.07
CIITA-210ENST00000575513 LIMS2Q7Z4I7 341 aa14.61□□□□□ -0.07
CIITA-210ENST00000575513 RNF135Q8IUD6 432 aa14.61□□□□□ -0.07
CIITA-210ENST00000575513 ZNF516Q92618 1163 aa14.61□□□□□ -0.07
CIITA-210ENST00000575513 HPDLQ96IR7 371 aa14.61□□□□□ -0.07
CIITA-210ENST00000575513 AVENQ9NQS1 362 aaPredicted RBP14.61□□□□□ -0.07
CIITA-210ENST00000575513 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.61□□□□□ -0.07
CIITA-210ENST00000575513 CDH22Q9UJ99 828 aa14.61□□□□□ -0.07
CIITA-210ENST00000575513 MAPK8IP1Q9UQF2 711 aa14.61□□□□□ -0.07
CIITA-210ENST00000575513 TULP1O00294 542 aaPredicted RBP14.6□□□□□ -0.07
CIITA-210ENST00000575513 PRRG1O14668 218 aa14.6□□□□□ -0.07
CIITA-210ENST00000575513 CPB1P15086 417 aa14.6□□□□□ -0.07
CIITA-210ENST00000575513 PSMC2P35998 433 aaKnown RBP14.6□□□□□ -0.07
CIITA-210ENST00000575513 LHX1P48742 406 aa14.6□□□□□ -0.07
CIITA-210ENST00000575513 ADCY1Q08828 1119 aa14.6□□□□□ -0.07
CIITA-210ENST00000575513 FOXR2Q6PJQ5 311 aa14.6□□□□□ -0.07
CIITA-210ENST00000575513 INTS8Q75QN2 995 aaKnown RBP14.6□□□□□ -0.07
CIITA-210ENST00000575513 ADSSL1Q8N142 457 aa14.6□□□□□ -0.07
CIITA-210ENST00000575513 PDCL2Q8N4E4 241 aa14.6□□□□□ -0.07
CIITA-210ENST00000575513 TDRD5Q8NAT2 981 aaKnown RBP14.6□□□□□ -0.07
CIITA-210ENST00000575513 C2orf15Q8WU43 125 aaKnown RBP14.6□□□□□ -0.07
CIITA-210ENST00000575513 ACBD6Q9BR61 282 aa14.6□□□□□ -0.07
CIITA-210ENST00000575513 MKNK1Q9BUB5 465 aa14.6□□□□□ -0.07
CIITA-210ENST00000575513 ZCWPW1Q9H0M4 648 aa14.6□□□□□ -0.07
CIITA-210ENST00000575513 CYP4F11Q9HBI6 524 aa14.6□□□□□ -0.07
CIITA-210ENST00000575513 LMBRD1Q9NUN5 540 aa14.6□□□□□ -0.07
CIITA-210ENST00000575513 ZFP37Q9Y6Q3 630 aaPredicted RBP14.6□□□□□ -0.07
CIITA-210ENST00000575513 MTCL1Q9Y4B5 1905 aaKnown RBP14.6□□□□□ -0.07
CIITA-210ENST00000575513 CLUHO75153 1309 aa14.6□□□□□ -0.07
CIITA-210ENST00000575513 LRRIQ3A6PVS8 624 aaPredicted RBP14.59□□□□□ -0.07
CIITA-210ENST00000575513 C2CD4DB7Z1M9 353 aa14.59□□□□□ -0.07
CIITA-210ENST00000575513 GOLGA6L22H0YM25 854 aa14.59□□□□□ -0.07
CIITA-210ENST00000575513 GABRDO14764 452 aa14.59□□□□□ -0.07
CIITA-210ENST00000575513 DCXO43602 365 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms