RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 THAP9Q9H5L6 903 aa17.48■□□□□ 0.39
PFN1-203ENST00000574872 RXFP1Q9HBX9 757 aa17.48■□□□□ 0.39
PFN1-203ENST00000574872 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.48■□□□□ 0.395e-10■□□□□ 10.5
PFN1-203ENST00000574872 SAMSN1Q9NSI8 373 aaKnown RBP17.48■□□□□ 0.39
PFN1-203ENST00000574872 MTRRQ9UBK8 725 aa17.48■□□□□ 0.39
PFN1-203ENST00000574872 NXF1Q9UBU9 619 aaKnown RBP17.48■□□□□ 0.39
PFN1-203ENST00000574872 L1RE1Q9UN81 338 aa17.48■□□□□ 0.39
PFN1-203ENST00000574872 HUS1O60921 280 aa17.47■□□□□ 0.39
PFN1-203ENST00000574872 LRRN2O75325 713 aa17.47■□□□□ 0.39
PFN1-203ENST00000574872 TYMPP19971 482 aa17.47■□□□□ 0.39
PFN1-203ENST00000574872 PAX3P23760 479 aa17.47■□□□□ 0.39
PFN1-203ENST00000574872 MARSP56192 900 aaKnown RBP17.47■□□□□ 0.39
PFN1-203ENST00000574872 ARPP19P56211 112 aa17.47■□□□□ 0.39
PFN1-203ENST00000574872 MCCD1P59942 119 aaPredicted RBP17.47■□□□□ 0.39
PFN1-203ENST00000574872 CREMQ03060 361 aa17.47■□□□□ 0.39
PFN1-203ENST00000574872 WDR72Q3MJ13 1102 aa17.47■□□□□ 0.39
PFN1-203ENST00000574872 OVOS1Q6IE37 1185 aa17.47■□□□□ 0.39
PFN1-203ENST00000574872 SPOPLQ6IQ16 392 aa17.47■□□□□ 0.39
PFN1-203ENST00000574872 ZNF280DQ6N043 979 aa17.47■□□□□ 0.39
PFN1-203ENST00000574872 PDXDC1Q6P996 788 aa17.47■□□□□ 0.39
PFN1-203ENST00000574872 SCARA5Q6ZMJ2 495 aa17.47■□□□□ 0.39
PFN1-203ENST00000574872 PALB2Q86YC2 1186 aa17.47■□□□□ 0.39
PFN1-203ENST00000574872 TRIM59Q8IWR1 403 aa17.47■□□□□ 0.39
PFN1-203ENST00000574872 PDCL2Q8N4E4 241 aa17.47■□□□□ 0.39
PFN1-203ENST00000574872 VN1R2Q8NFZ6 395 aa17.47■□□□□ 0.39
PFN1-203ENST00000574872 MMS19Q96T76 1030 aa17.47■□□□□ 0.39
PFN1-203ENST00000574872 CLSTN3Q9BQT9 956 aa17.47■□□□□ 0.39
PFN1-203ENST00000574872 GDAP2Q9NXN4 497 aa17.47■□□□□ 0.39
PFN1-203ENST00000574872 CLDND1Q9NY35 253 aa17.47■□□□□ 0.39
PFN1-203ENST00000574872 MAGEC2Q9UBF1 373 aaPredicted RBP17.47■□□□□ 0.39
PFN1-203ENST00000574872 POLIQ9UNA4 740 aa17.47■□□□□ 0.39
PFN1-203ENST00000574872 CDY1Q9Y6F8 540 aa17.47■□□□□ 0.39
PFN1-203ENST00000574872 COL6A3P12111 3177 aa17.46■□□□□ 0.39
PFN1-203ENST00000574872 PRUNE2Q8WUY3 3088 aa17.46■□□□□ 0.39
PFN1-203ENST00000574872 BRWD1Q9NSI6 2320 aa17.46■□□□□ 0.39
PFN1-203ENST00000574872 ARHGEF37A1IGU5 675 aa17.46■□□□□ 0.39
PFN1-203ENST00000574872 H7C4K7 107 aa17.46■□□□□ 0.39
PFN1-203ENST00000574872 ADH1AP07327 375 aa17.46■□□□□ 0.39
PFN1-203ENST00000574872 EPCAMP16422 314 aa17.46■□□□□ 0.39
PFN1-203ENST00000574872 ATICP31939 592 aa17.46■□□□□ 0.39
PFN1-203ENST00000574872 OR1D2P34982 312 aa17.46■□□□□ 0.39
PFN1-203ENST00000574872 MTIF2P46199 727 aaKnown RBP17.46■□□□□ 0.39
PFN1-203ENST00000574872 FMO5P49326 533 aa17.46■□□□□ 0.39
PFN1-203ENST00000574872 NDUFV1P49821 464 aa17.46■□□□□ 0.39
PFN1-203ENST00000574872 TNNC1P63316 161 aa17.46■□□□□ 0.39
PFN1-203ENST00000574872 MYL7Q01449 175 aa17.46■□□□□ 0.39
PFN1-203ENST00000574872 MYL5Q02045 173 aa17.46■□□□□ 0.39
PFN1-203ENST00000574872 METTL23Q86XA0 190 aa17.46■□□□□ 0.39
PFN1-203ENST00000574872 FAM114A1Q8IWE2 563 aa17.46■□□□□ 0.39
PFN1-203ENST00000574872 GPR65Q8IYL9 337 aa17.46■□□□□ 0.39
PFN1-203ENST00000574872 AOPEPQ8N6M6 819 aa17.46■□□□□ 0.39
PFN1-203ENST00000574872 EFHBQ8N7U6 833 aa17.46■□□□□ 0.39
PFN1-203ENST00000574872 SEMA4DQ92854 862 aa17.46■□□□□ 0.39
PFN1-203ENST00000574872 CDCA3Q99618 268 aaPredicted RBP17.46■□□□□ 0.39
PFN1-203ENST00000574872 NAT10Q9H0A0 1025 aaKnown RBP17.46■□□□□ 0.39
PFN1-203ENST00000574872 PRDM6Q9NQX0 595 aa17.46■□□□□ 0.39
PFN1-203ENST00000574872 FNIP2Q9P278 1114 aa17.46■□□□□ 0.39
PFN1-203ENST00000574872 FBXL5Q9UKA1 691 aa17.46■□□□□ 0.39
PFN1-203ENST00000574872 DSEQ9UL01 958 aa17.46■□□□□ 0.39
PFN1-203ENST00000574872 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.46■□□□□ 0.39
PFN1-203ENST00000574872 BACE2Q9Y5Z0 518 aa17.46■□□□□ 0.39
PFN1-203ENST00000574872 HCFC2Q9Y5Z7 792 aa17.46■□□□□ 0.39
PFN1-203ENST00000574872 TSC2P49815 1807 aa17.45■□□□□ 0.38
PFN1-203ENST00000574872 CYP11A1P05108 521 aa17.45■□□□□ 0.38
PFN1-203ENST00000574872 SPATA31D3P0C874 917 aa17.45■□□□□ 0.38
PFN1-203ENST00000574872 KCNH2Q12809 1159 aa17.45■□□□□ 0.38
PFN1-203ENST00000574872 MRPL58Q14197 206 aaKnown RBP17.45■□□□□ 0.38
PFN1-203ENST00000574872 SOWAHAQ2M3V2 549 aa17.45■□□□□ 0.38
PFN1-203ENST00000574872 SGSM1Q2NKQ1 1148 aa17.45■□□□□ 0.38
PFN1-203ENST00000574872 ZNF667Q5HYK9 610 aa17.45■□□□□ 0.38
PFN1-203ENST00000574872 SPATA31D4Q6ZUB0 917 aa17.45■□□□□ 0.38
PFN1-203ENST00000574872 OSTM1Q86WC4 334 aa17.45■□□□□ 0.38
PFN1-203ENST00000574872 ADGRF2Q8IZF7 708 aa17.45■□□□□ 0.38
PFN1-203ENST00000574872 TOP6BLQ8N6T0 577 aa17.45■□□□□ 0.38
PFN1-203ENST00000574872 FBXL13Q8NEE6 735 aa17.45■□□□□ 0.38
PFN1-203ENST00000574872 IMPG2Q9BZV3 1241 aa17.45■□□□□ 0.38
PFN1-203ENST00000574872 SMYD3Q9H7B4 428 aa17.45■□□□□ 0.38
PFN1-203ENST00000574872 FANCLQ9NW38 375 aa17.45■□□□□ 0.38
PFN1-203ENST00000574872 BARX2Q9UMQ3 279 aaPredicted RBP17.45■□□□□ 0.38
PFN1-203ENST00000574872 KCNJ18B7U540 433 aa17.44■□□□□ 0.38
PFN1-203ENST00000574872 HCRTO43612 131 aa17.44■□□□□ 0.38
PFN1-203ENST00000574872 TBC1D4O60343 1298 aa17.44■□□□□ 0.38
PFN1-203ENST00000574872 OAZ2O95190 189 aa17.44■□□□□ 0.38
PFN1-203ENST00000574872 STAU1O95793 577 aaKnown RBP17.44■□□□□ 0.38
PFN1-203ENST00000574872 GLP2RO95838 553 aa17.44■□□□□ 0.38
PFN1-203ENST00000574872 GLUD1P00367 558 aa17.44■□□□□ 0.38
PFN1-203ENST00000574872 ASS1P00966 412 aaKnown RBP17.44■□□□□ 0.38
PFN1-203ENST00000574872 AFPP02771 609 aaKnown RBP17.44■□□□□ 0.38
PFN1-203ENST00000574872 OR4Q2P0C623 313 aa17.44■□□□□ 0.38
PFN1-203ENST00000574872 RAP1GAPP47736 663 aa17.44■□□□□ 0.38
PFN1-203ENST00000574872 CLCN4P51793 760 aa17.44■□□□□ 0.38
PFN1-203ENST00000574872 CDR1P51861 262 aa17.44■□□□□ 0.38
PFN1-203ENST00000574872 NOP14P78316 857 aaKnown RBP17.44■□□□□ 0.38
PFN1-203ENST00000574872 KCNJ12Q14500 433 aa17.44■□□□□ 0.38
PFN1-203ENST00000574872 OR10T2Q8NGX3 314 aa17.44■□□□□ 0.38
PFN1-203ENST00000574872 SLC22A17Q8WUG5 538 aa17.44■□□□□ 0.38
PFN1-203ENST00000574872 PABPC5Q96DU9 382 aaKnown RBP17.44■□□□□ 0.38
PFN1-203ENST00000574872 TMEM209Q96SK2 561 aa17.44■□□□□ 0.38
PFN1-203ENST00000574872 RTP3Q9BQQ7 232 aa17.44■□□□□ 0.38
PFN1-203ENST00000574872 MRPL45Q9BRJ2 306 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms