RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 PTPN2P17706 415 aa12.25□□□□□ -0.45
RPAIN-214ENST00000574003 TYMPP19971 482 aa12.25□□□□□ -0.45
RPAIN-214ENST00000574003 ME1P48163 572 aa12.25□□□□□ -0.45
RPAIN-214ENST00000574003 PTPN5P54829 565 aa12.25□□□□□ -0.45
RPAIN-214ENST00000574003 ASIC1P78348 528 aa12.25□□□□□ -0.45
RPAIN-214ENST00000574003 TFAMQ00059 246 aaKnown RBP12.25□□□□□ -0.45
RPAIN-214ENST00000574003 POSTNQ15063 836 aa12.25□□□□□ -0.45
RPAIN-214ENST00000574003 WSCD1Q658N2 575 aa12.25□□□□□ -0.45
RPAIN-214ENST00000574003 TPGS2Q68CL5 300 aa12.25□□□□□ -0.45
RPAIN-214ENST00000574003 TANGO2Q6ICL3 276 aa12.25□□□□□ -0.45
RPAIN-214ENST00000574003 BRSK2Q8IWQ3 736 aa12.25□□□□□ -0.45
RPAIN-214ENST00000574003 CCDC65Q8IXS2 484 aa12.25□□□□□ -0.45
RPAIN-214ENST00000574003 BORCS6Q96GS4 357 aa12.25□□□□□ -0.45
RPAIN-214ENST00000574003 ZSWIM3Q96MP5 696 aa12.25□□□□□ -0.45
RPAIN-214ENST00000574003 FOXQ1Q9C009 403 aa12.25□□□□□ -0.45
RPAIN-214ENST00000574003 TRIM9Q9C026 710 aa12.25□□□□□ -0.45
RPAIN-214ENST00000574003 DNAJC25Q9H1X3 360 aa12.25□□□□□ -0.45
RPAIN-214ENST00000574003 ASB7Q9H672 318 aa12.25□□□□□ -0.45
RPAIN-214ENST00000574003 TBC1D17Q9HA65 648 aa12.25□□□□□ -0.45
RPAIN-214ENST00000574003 PDE11AQ9HCR9 933 aa12.25□□□□□ -0.45
RPAIN-214ENST00000574003 WNT16Q9UBV4 365 aa12.25□□□□□ -0.45
RPAIN-214ENST00000574003 DERAQ9Y315 318 aa12.25□□□□□ -0.45
RPAIN-214ENST00000574003 ZDHHC9Q9Y397 364 aa12.25□□□□□ -0.45
RPAIN-214ENST00000574003 PCDHB13Q9Y5F0 798 aa12.25□□□□□ -0.45
RPAIN-214ENST00000574003 MTMR11A4FU01 709 aa12.24□□□□□ -0.45
RPAIN-214ENST00000574003 CYB561D2O14569 222 aa12.24□□□□□ -0.45
RPAIN-214ENST00000574003 NCANO14594 1321 aa12.24□□□□□ -0.45
RPAIN-214ENST00000574003 DCNP07585 359 aaKnown RBP12.24□□□□□ -0.45
RPAIN-214ENST00000574003 ODC1P11926 461 aa12.24□□□□□ -0.45
RPAIN-214ENST00000574003 F5P12259 2224 aa12.24□□□□□ -0.45
RPAIN-214ENST00000574003 POLR2BP30876 1174 aaKnown RBP12.24□□□□□ -0.45
RPAIN-214ENST00000574003 ABCD1P33897 745 aa12.24□□□□□ -0.45
RPAIN-214ENST00000574003 AFMP43652 599 aa12.24□□□□□ -0.45
RPAIN-214ENST00000574003 TAF6P49848 677 aa12.24□□□□□ -0.45
RPAIN-214ENST00000574003 CLCN5P51795 746 aa12.24□□□□□ -0.45
RPAIN-214ENST00000574003 PTPRJQ12913 1337 aa12.24□□□□□ -0.45
RPAIN-214ENST00000574003 SNW1Q13573 536 aaKnown RBP12.24□□□□□ -0.45
RPAIN-214ENST00000574003 GRM2Q14416 872 aa12.24□□□□□ -0.45
RPAIN-214ENST00000574003 CCDC142Q17RM4 750 aa12.24□□□□□ -0.45
RPAIN-214ENST00000574003 PDZD4Q76G19 769 aaPredicted RBP12.24□□□□□ -0.45
RPAIN-214ENST00000574003 LRRTM3Q86VH5 581 aa12.24□□□□□ -0.45
RPAIN-214ENST00000574003 NELFCDQ8IXH7 590 aa12.24□□□□□ -0.45
RPAIN-214ENST00000574003 C1orf127Q8N9H9 656 aa12.24□□□□□ -0.45
RPAIN-214ENST00000574003 STKLD1Q8NE28 680 aa12.24□□□□□ -0.45
RPAIN-214ENST00000574003 ATOH1Q92858 354 aaPredicted RBP12.24□□□□□ -0.45
RPAIN-214ENST00000574003 NXPE3Q969Y0 559 aa12.24□□□□□ -0.45
RPAIN-214ENST00000574003 LPIN3Q9BQK8 851 aa12.24□□□□□ -0.45
RPAIN-214ENST00000574003 TNMDQ9H2S6 317 aa12.24□□□□□ -0.45
RPAIN-214ENST00000574003 ZNF334Q9HCZ1 680 aaPredicted RBP12.24□□□□□ -0.45
RPAIN-214ENST00000574003 ARHGEF3Q9NR81 526 aa12.24□□□□□ -0.45
RPAIN-214ENST00000574003 RBAKQ9NYW8 714 aaPredicted RBP12.24□□□□□ -0.45
RPAIN-214ENST00000574003 CACNA1IQ9P0X4 2223 aa12.24□□□□□ -0.45
RPAIN-214ENST00000574003 KCNH3Q9ULD8 1083 aa12.24□□□□□ -0.45
RPAIN-214ENST00000574003 AGAP1Q9UPQ3 857 aa12.24□□□□□ -0.45
RPAIN-214ENST00000574003 C2CD2Q9Y426 696 aa12.24□□□□□ -0.45
RPAIN-214ENST00000574003 ZFP37Q9Y6Q3 630 aaPredicted RBP12.24□□□□□ -0.45
RPAIN-214ENST00000574003 ZFHX2Q9C0A1 2572 aaPredicted RBP12.23□□□□□ -0.45
RPAIN-214ENST00000574003 OR6C75A6NL08 312 aa12.23□□□□□ -0.45
RPAIN-214ENST00000574003 CLIC2O15247 247 aa12.23□□□□□ -0.45
RPAIN-214ENST00000574003 HCRTO43612 131 aa12.23□□□□□ -0.45
RPAIN-214ENST00000574003 EXTL3O43909 919 aa12.23□□□□□ -0.45
RPAIN-214ENST00000574003 IL18RAPO95256 599 aa12.23□□□□□ -0.45
RPAIN-214ENST00000574003 ITGB3P05106 788 aa12.23□□□□□ -0.45
RPAIN-214ENST00000574003 AOC1P19801 751 aa12.23□□□□□ -0.45
RPAIN-214ENST00000574003 CD72P21854 359 aa12.23□□□□□ -0.45
RPAIN-214ENST00000574003 GARTP22102 1010 aa12.23□□□□□ -0.45
RPAIN-214ENST00000574003 FCARP24071 287 aa12.23□□□□□ -0.45
RPAIN-214ENST00000574003 VIPR2P41587 438 aa12.23□□□□□ -0.45
RPAIN-214ENST00000574003 GPR17Q13304 367 aa12.23□□□□□ -0.45
RPAIN-214ENST00000574003 CUL4BQ13620 913 aa12.23□□□□□ -0.45
RPAIN-214ENST00000574003 TEAD2Q15562 447 aa12.23□□□□□ -0.45
RPAIN-214ENST00000574003 SLC39A12Q504Y0 691 aa12.23□□□□□ -0.45
RPAIN-214ENST00000574003 FAM78AQ5JUQ0 283 aa12.23□□□□□ -0.45
RPAIN-214ENST00000574003 STXBP5Q5T5C0 1151 aa12.23□□□□□ -0.45
RPAIN-214ENST00000574003 RESP18Q5W5W9 173 aa12.23□□□□□ -0.45
RPAIN-214ENST00000574003 CENPPQ6IPU0 288 aa12.23□□□□□ -0.45
RPAIN-214ENST00000574003 ARMCX5Q6P1M9 558 aa12.23□□□□□ -0.45
RPAIN-214ENST00000574003 RTL10Q7L3V2 364 aa12.23□□□□□ -0.45
RPAIN-214ENST00000574003 CBWD2Q8IUF1 395 aa12.23□□□□□ -0.45
RPAIN-214ENST00000574003 IQUBQ8NA54 791 aa12.23□□□□□ -0.45
RPAIN-214ENST00000574003 CXorf38Q8TB03 319 aa12.23□□□□□ -0.45
RPAIN-214ENST00000574003 SHKBP1Q8TBC3 707 aa12.23□□□□□ -0.45
RPAIN-214ENST00000574003 ZNF512Q96ME7 567 aaPredicted RBP12.23□□□□□ -0.45
RPAIN-214ENST00000574003 TSPAN18Q96SJ8 248 aa12.23□□□□□ -0.45
RPAIN-214ENST00000574003 C7orf25Q9BPX7 421 aa12.23□□□□□ -0.45
RPAIN-214ENST00000574003 LRRC3Q9BY71 257 aa12.23□□□□□ -0.45
RPAIN-214ENST00000574003 MTMR12Q9C0I1 747 aa12.23□□□□□ -0.45
RPAIN-214ENST00000574003 AVENQ9NQS1 362 aaPredicted RBP12.23□□□□□ -0.45
RPAIN-214ENST00000574003 SLC2A4RGQ9NR83 387 aa12.23□□□□□ -0.45
RPAIN-214ENST00000574003 SERTAD1Q9UHV2 236 aa12.23□□□□□ -0.45
RPAIN-214ENST00000574003 MTF2Q9Y483 593 aaPredicted RBP12.23□□□□□ -0.45
RPAIN-214ENST00000574003 PTPRZ1P23471 2315 aaPredicted RBP12.23□□□□□ -0.45
RPAIN-214ENST00000574003 A0A1W2PRU2 124 aa12.22□□□□□ -0.45
RPAIN-214ENST00000574003 CYP11A1P05108 521 aa12.22□□□□□ -0.45
RPAIN-214ENST00000574003 GLULP15104 373 aa12.22□□□□□ -0.45
RPAIN-214ENST00000574003 RFX1P22670 979 aa12.22□□□□□ -0.45
RPAIN-214ENST00000574003 GPR15P49685 360 aa12.22□□□□□ -0.45
RPAIN-214ENST00000574003 BFSP1Q12934 665 aa12.22□□□□□ -0.45
RPAIN-214ENST00000574003 ALCAMQ13740 583 aa12.22□□□□□ -0.45
RPAIN-214ENST00000574003 MYBPC2Q14324 1141 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms