RNA–Protein interactions for RNA: ENST00000572290.1

NUP88-204, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-204ENST00000572290 OR4Q2P0C623 313 aa21.73■■□□□ 1.07
NUP88-204ENST00000572290 PRR29P0C7W0 189 aa21.73■■□□□ 1.07
NUP88-204ENST00000572290 ADCY1Q08828 1119 aa21.73■■□□□ 1.07
NUP88-204ENST00000572290 SIGLEC14Q08ET2 396 aa21.73■■□□□ 1.07
NUP88-204ENST00000572290 MYBPC2Q14324 1141 aa21.73■■□□□ 1.07
NUP88-204ENST00000572290 SNRNP35Q16560 246 aaKnown RBP21.73■■□□□ 1.07
NUP88-204ENST00000572290 LMBRD2Q68DH5 695 aaPredicted RBP21.73■■□□□ 1.07
NUP88-204ENST00000572290 RNF19BQ6ZMZ0 732 aa21.73■■□□□ 1.07
NUP88-204ENST00000572290 C12orf56Q8IXR9 622 aa21.73■■□□□ 1.07
NUP88-204ENST00000572290 CSGALNACT2Q8N6G5 542 aa21.73■■□□□ 1.07
NUP88-204ENST00000572290 GOLGA5Q8TBA6 731 aa21.73■■□□□ 1.07
NUP88-204ENST00000572290 ANKRD36BP1Q96IX9 119 aa21.73■■□□□ 1.07
NUP88-204ENST00000572290 FAM84AQ96KN4 292 aa21.73■■□□□ 1.07
NUP88-204ENST00000572290 MTMR12Q9C0I1 747 aa21.73■■□□□ 1.07
NUP88-204ENST00000572290 INTS13Q9NVM9 706 aa21.73■■□□□ 1.07
NUP88-204ENST00000572290 EPS15L1Q9UBC2 864 aa21.73■■□□□ 1.07
NUP88-204ENST00000572290 DNMT3BQ9UBC3 853 aaKnown RBP21.73■■□□□ 1.07
NUP88-204ENST00000572290 INSL5Q9Y5Q6 135 aa21.73■■□□□ 1.07
NUP88-204ENST00000572290 TRIP11Q15643 1979 aa21.72■■□□□ 1.07
NUP88-204ENST00000572290 KRT19P08727 400 aa21.72■■□□□ 1.07
NUP88-204ENST00000572290 COL9A1P20849 921 aa21.72■■□□□ 1.07
NUP88-204ENST00000572290 RBP5P82980 135 aa21.72■■□□□ 1.07
NUP88-204ENST00000572290 DPYDQ12882 1025 aa21.72■■□□□ 1.07
NUP88-204ENST00000572290 GPR17Q13304 367 aa21.72■■□□□ 1.07
NUP88-204ENST00000572290 UBALD2Q8IYN6 164 aa21.72■■□□□ 1.07
NUP88-204ENST00000572290 LRRC52Q8N7C0 313 aa21.72■■□□□ 1.07
NUP88-204ENST00000572290 CCDC34Q96HJ3 373 aa21.72■■□□□ 1.07
NUP88-204ENST00000572290 KCNK12Q9HB15 430 aa21.72■■□□□ 1.07
NUP88-204ENST00000572290 HCFC1R1Q9NWW0 138 aa21.72■■□□□ 1.07
NUP88-204ENST00000572290 R3HCC1Q9Y3T6 440 aaKnown RBP21.72■■□□□ 1.07
NUP88-204ENST00000572290 TMEM221A6NGB7 291 aa21.71■■□□□ 1.07
NUP88-204ENST00000572290 M0R296 226 aa21.71■■□□□ 1.07
NUP88-204ENST00000572290 TNNC2P02585 160 aa21.71■■□□□ 1.07
NUP88-204ENST00000572290 DUOXA2Q1HG44 320 aa21.71■■□□□ 1.07
NUP88-204ENST00000572290 PABPC1LQ4VXU2 614 aaKnown RBP21.71■■□□□ 1.07
NUP88-204ENST00000572290 WSCD1Q658N2 575 aa21.71■■□□□ 1.07
NUP88-204ENST00000572290 WDR49Q8IV35 697 aa21.71■■□□□ 1.07
NUP88-204ENST00000572290 THEM5Q8N1Q8 247 aa21.71■■□□□ 1.07
NUP88-204ENST00000572290 OR5B17Q8NGF7 314 aa21.71■■□□□ 1.07
NUP88-204ENST00000572290 CXorf38Q8TB03 319 aa21.71■■□□□ 1.07
NUP88-204ENST00000572290 PGLYRP2Q96PD5 576 aa21.71■■□□□ 1.07
NUP88-204ENST00000572290 IGSF9Q9P2J2 1179 aa21.71■■□□□ 1.07
NUP88-204ENST00000572290 SIX4Q9UIU6 781 aa21.71■■□□□ 1.07
NUP88-204ENST00000572290 ZFP37Q9Y6Q3 630 aaPredicted RBP21.71■■□□□ 1.07
NUP88-204ENST00000572290 EXOC3O60645 756 aa21.7■■□□□ 1.06
NUP88-204ENST00000572290 RHOBTB3O94955 611 aa21.7■■□□□ 1.06
NUP88-204ENST00000572290 LAMP2P13473 410 aa21.7■■□□□ 1.06
NUP88-204ENST00000572290 PTPN2P17706 415 aa21.7■■□□□ 1.06
NUP88-204ENST00000572290 CYP24A1Q07973 514 aa21.7■■□□□ 1.06
NUP88-204ENST00000572290 BFSP1Q12934 665 aa21.7■■□□□ 1.06
NUP88-204ENST00000572290 PSMD6Q15008 389 aa21.7■■□□□ 1.06
NUP88-204ENST00000572290 OR10T2Q8NGX3 314 aa21.7■■□□□ 1.06
NUP88-204ENST00000572290 FNBP1Q96RU3 617 aa21.7■■□□□ 1.06
NUP88-204ENST00000572290 TMEM209Q96SK2 561 aa21.7■■□□□ 1.06
NUP88-204ENST00000572290 CDH7Q9ULB5 785 aa21.7■■□□□ 1.06
NUP88-204ENST00000572290 PTPRJQ12913 1337 aa21.7■■□□□ 1.06
NUP88-204ENST00000572290 PDCD11Q14690 1871 aaKnown RBP21.7■■□□□ 1.06
NUP88-204ENST00000572290 PRPF40AO75400 957 aaKnown RBP21.69■■□□□ 1.06
NUP88-204ENST00000572290 KIF20AO95235 890 aa21.69■■□□□ 1.06
NUP88-204ENST00000572290 RHOP08100 348 aa21.69■■□□□ 1.06
NUP88-204ENST00000572290 DLATP10515 647 aaKnown RBP21.69■■□□□ 1.06
NUP88-204ENST00000572290 TWF1Q12792 350 aa21.69■■□□□ 1.06
NUP88-204ENST00000572290 TDGQ13569 410 aa21.69■■□□□ 1.06
NUP88-204ENST00000572290 SCARA3Q6AZY7 606 aa21.69■■□□□ 1.06
NUP88-204ENST00000572290 HFE2Q6ZVN8 426 aa21.69■■□□□ 1.06
NUP88-204ENST00000572290 BMP8AQ7Z5Y6 402 aa21.69■■□□□ 1.06
NUP88-204ENST00000572290 ELMOD1Q8N336 334 aa21.69■■□□□ 1.06
NUP88-204ENST00000572290 ITFG1Q8TB96 612 aa21.69■■□□□ 1.06
NUP88-204ENST00000572290 CCDC127Q96BQ5 260 aa21.69■■□□□ 1.06
NUP88-204ENST00000572290 CGRRF1Q99675 332 aa21.69■■□□□ 1.06
NUP88-204ENST00000572290 KCTD10Q9H3F6 313 aa21.69■■□□□ 1.06
NUP88-204ENST00000572290 SMOC2Q9H3U7 446 aa21.69■■□□□ 1.06
NUP88-204ENST00000572290 MTMR11A4FU01 709 aa21.68■■□□□ 1.06
NUP88-204ENST00000572290 HUS1O60921 280 aa21.68■■□□□ 1.06
NUP88-204ENST00000572290 VNN2O95498 520 aa21.68■■□□□ 1.06
NUP88-204ENST00000572290 TNNI1P19237 187 aa21.68■■□□□ 1.06
NUP88-204ENST00000572290 DUSP4Q13115 394 aa21.68■■□□□ 1.06
NUP88-204ENST00000572290 KCNB1Q14721 858 aa21.68■■□□□ 1.06
NUP88-204ENST00000572290 IQCEQ6IPM2 695 aa21.68■■□□□ 1.06
NUP88-204ENST00000572290 FMR1NBQ8N0W7 255 aaPredicted RBP21.68■■□□□ 1.06
NUP88-204ENST00000572290 FGF13Q92913 245 aa21.68■■□□□ 1.06
NUP88-204ENST00000572290 NXPE3Q969Y0 559 aa21.68■■□□□ 1.06
NUP88-204ENST00000572290 ASIC4Q96FT7 647 aa21.68■■□□□ 1.06
NUP88-204ENST00000572290 MFSD14AQ96MC6 490 aa21.68■■□□□ 1.06
NUP88-204ENST00000572290 ZNF512Q96ME7 567 aaPredicted RBP21.68■■□□□ 1.06
NUP88-204ENST00000572290 RTP3Q9BQQ7 232 aa21.68■■□□□ 1.06
NUP88-204ENST00000572290 CORO1BQ9BR76 489 aa21.68■■□□□ 1.06
NUP88-204ENST00000572290 ZCWPW1Q9H0M4 648 aa21.68■■□□□ 1.06
NUP88-204ENST00000572290 AVENQ9NQS1 362 aaPredicted RBP21.68■■□□□ 1.06
NUP88-204ENST00000572290 GDAP2Q9NXN4 497 aa21.68■■□□□ 1.06
NUP88-204ENST00000572290 CIZ1Q9ULV3 898 aaPredicted RBP21.68■■□□□ 1.06
NUP88-204ENST00000572290 MRPS23Q9Y3D9 190 aaKnown RBP21.68■■□□□ 1.06
NUP88-204ENST00000572290 YIPF1Q9Y548 306 aa21.68■■□□□ 1.06
NUP88-204ENST00000572290 PDXKO00764 312 aa21.67■■□□□ 1.06
NUP88-204ENST00000572290 MYO1EQ12965 1108 aa21.67■■□□□ 1.06
NUP88-204ENST00000572290 PLD1Q13393 1074 aa21.67■■□□□ 1.06
NUP88-204ENST00000572290 SLC39A12Q504Y0 691 aa21.67■■□□□ 1.06
NUP88-204ENST00000572290 CENPPQ6IPU0 288 aa21.67■■□□□ 1.06
NUP88-204ENST00000572290 TRAPPC11Q7Z392 1133 aa21.67■■□□□ 1.06
NUP88-204ENST00000572290 SLC9A9Q8IVB4 645 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms