RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 CCNG1P51959 295 aa11.37□□□□□ -0.59
CCDC40-207ENST00000572253 MCL1Q07820 350 aa11.37□□□□□ -0.59
CCDC40-207ENST00000572253 MAMLD1Q13495 774 aa11.37□□□□□ -0.59
CCDC40-207ENST00000572253 PKN2Q16513 984 aaKnown RBP11.37□□□□□ -0.59
CCDC40-207ENST00000572253 TMEM270Q6UE05 265 aa11.37□□□□□ -0.59
CCDC40-207ENST00000572253 LONP2Q86WA8 852 aa11.37□□□□□ -0.59
CCDC40-207ENST00000572253 ZBED8Q8IZ13 594 aa11.37□□□□□ -0.59
CCDC40-207ENST00000572253 NUDCD1Q96RS6 583 aa11.37□□□□□ -0.59
CCDC40-207ENST00000572253 EURLQ9NYK6 297 aa11.37□□□□□ -0.59
CCDC40-207ENST00000572253 MAP3K20Q9NYL2 800 aaKnown RBP11.37□□□□□ -0.59
CCDC40-207ENST00000572253 ZFP69BQ9UJL9 534 aa11.37□□□□□ -0.59
CCDC40-207ENST00000572253 TESPA1A2RU30 521 aaPredicted RBP11.37□□□□□ -0.59
CCDC40-207ENST00000572253 H0YIN7 160 aa11.37□□□□□ -0.59
CCDC40-207ENST00000572253 EXTL3O43909 919 aa11.37□□□□□ -0.59
CCDC40-207ENST00000572253 ZWINTO95229 277 aa11.37□□□□□ -0.59
CCDC40-207ENST00000572253 LMNAP02545 664 aaKnown RBP11.37□□□□□ -0.59
CCDC40-207ENST00000572253 PECAM1P16284 738 aaPredicted RBP11.37□□□□□ -0.59
CCDC40-207ENST00000572253 RAD23BP54727 409 aa11.37□□□□□ -0.59
CCDC40-207ENST00000572253 C1QBPQ07021 282 aaKnown RBP11.37□□□□□ -0.59
CCDC40-207ENST00000572253 WASHC2DQ5SRD0 308 aa11.37□□□□□ -0.59
CCDC40-207ENST00000572253 LLGL2Q6P1M3 1020 aa11.37□□□□□ -0.59
CCDC40-207ENST00000572253 PHF13Q86YI8 300 aaPredicted RBP11.37□□□□□ -0.59
CCDC40-207ENST00000572253 SAMD3Q8N6K7 520 aa11.37□□□□□ -0.59
CCDC40-207ENST00000572253 NAF1Q96HR8 494 aaKnown RBP11.37□□□□□ -0.59
CCDC40-207ENST00000572253 SHOC2Q9UQ13 582 aa11.37□□□□□ -0.59
CCDC40-207ENST00000572253 THSD7AQ9UPZ6 1657 aa11.37□□□□□ -0.59
CCDC40-207ENST00000572253 PI4K2BG5E9Z4 385 aa11.36□□□□□ -0.59
CCDC40-207ENST00000572253 IFNB1P01574 187 aa11.36□□□□□ -0.59
CCDC40-207ENST00000572253 PTGER2P43116 358 aa11.36□□□□□ -0.59
CCDC40-207ENST00000572253 NOMO3P69849 1222 aa11.36□□□□□ -0.59
CCDC40-207ENST00000572253 MRPS9P82933 396 aaKnown RBP11.36□□□□□ -0.59
CCDC40-207ENST00000572253 PDIA2Q13087 525 aaKnown RBP11.36□□□□□ -0.59
CCDC40-207ENST00000572253 ZRSR2Q15696 482 aaKnown RBP11.36□□□□□ -0.59
CCDC40-207ENST00000572253 DAB2IPQ5VWQ8 1189 aa11.36□□□□□ -0.59
CCDC40-207ENST00000572253 PLEKHA7Q6IQ23 1121 aa11.36□□□□□ -0.59
CCDC40-207ENST00000572253 DRICH1Q6PGQ1 229 aaPredicted RBP11.36□□□□□ -0.59
CCDC40-207ENST00000572253 DCUN1D2Q6PH85 259 aa11.36□□□□□ -0.59
CCDC40-207ENST00000572253 PCGF5Q86SE9 256 aa11.36□□□□□ -0.59
CCDC40-207ENST00000572253 OGFOD1Q8N543 542 aa11.36□□□□□ -0.59
CCDC40-207ENST00000572253 SYTL5Q8TDW5 730 aaPredicted RBP11.36□□□□□ -0.59
CCDC40-207ENST00000572253 TUBB6Q9BUF5 446 aa11.36□□□□□ -0.59
CCDC40-207ENST00000572253 IMPG2Q9BZV3 1241 aa11.36□□□□□ -0.59
CCDC40-207ENST00000572253 DNPEPQ9ULA0 475 aa11.36□□□□□ -0.59
CCDC40-207ENST00000572253 RPL26L1Q9UNX3 145 aaKnown RBP11.36□□□□□ -0.59
CCDC40-207ENST00000572253 CHKBQ9Y259 395 aa11.36□□□□□ -0.59
CCDC40-207ENST00000572253 PCDHA10Q9Y5I2 948 aa11.36□□□□□ -0.59
CCDC40-207ENST00000572253 SGK1O00141 431 aa11.36□□□□□ -0.59
CCDC40-207ENST00000572253 MMP10P09238 476 aa11.36□□□□□ -0.59
CCDC40-207ENST00000572253 TBXAS1P24557 533 aaPredicted RBP11.36□□□□□ -0.59
CCDC40-207ENST00000572253 SPP2Q13103 211 aa11.36□□□□□ -0.59
CCDC40-207ENST00000572253 CUL2Q13617 745 aa11.36□□□□□ -0.59
CCDC40-207ENST00000572253 PRUNE1Q86TP1 453 aa11.36□□□□□ -0.59
CCDC40-207ENST00000572253 SUPT20HQ8NEM7 779 aa11.36□□□□□ -0.59
CCDC40-207ENST00000572253 DENND1AQ8TEH3 1009 aa11.36□□□□□ -0.59
CCDC40-207ENST00000572253 STK32AQ8WU08 396 aa11.36□□□□□ -0.59
CCDC40-207ENST00000572253 NTPCRQ9BSD7 190 aaKnown RBP11.36□□□□□ -0.59
CCDC40-207ENST00000572253 KLHL11Q9NVR0 708 aa11.36□□□□□ -0.59
CCDC40-207ENST00000572253 CYP39A1Q9NYL5 469 aa11.36□□□□□ -0.59
CCDC40-207ENST00000572253 DRG1Q9Y295 367 aaKnown RBP11.36□□□□□ -0.59
CCDC40-207ENST00000572253 ASNSP08243 561 aa11.36□□□□□ -0.59
CCDC40-207ENST00000572253 NEFHP12036 1026 aa11.36□□□□□ -0.59
CCDC40-207ENST00000572253 PSMD6Q15008 389 aa11.36□□□□□ -0.59
CCDC40-207ENST00000572253 ARHGEF16Q5VV41 709 aa11.36□□□□□ -0.59
CCDC40-207ENST00000572253 LMBRD2Q68DH5 695 aaPredicted RBP11.36□□□□□ -0.59
CCDC40-207ENST00000572253 TRIM68Q6AZZ1 485 aa11.36□□□□□ -0.59
CCDC40-207ENST00000572253 CCDC125Q86Z20 511 aa11.36□□□□□ -0.59
CCDC40-207ENST00000572253 ALLCQ8N6M5 410 aa11.36□□□□□ -0.59
CCDC40-207ENST00000572253 KIAA1683Q9H0B3 1180 aa11.36□□□□□ -0.59
CCDC40-207ENST00000572253 SLCO1B3Q9NPD5 702 aa11.36□□□□□ -0.59
CCDC40-207ENST00000572253 ZNF70Q9UC06 446 aaPredicted RBP11.36□□□□□ -0.59
CCDC40-207ENST00000572253 ALOX15BO15296 676 aa11.35□□□□□ -0.59
CCDC40-207ENST00000572253 CALB1P05937 261 aa11.35□□□□□ -0.59
CCDC40-207ENST00000572253 RPA3P35244 121 aaPredicted RBP11.35□□□□□ -0.59
CCDC40-207ENST00000572253 RASA2Q15283 850 aa11.35□□□□□ -0.59
CCDC40-207ENST00000572253 CCDC6Q16204 474 aa11.35□□□□□ -0.59
CCDC40-207ENST00000572253 SLC45A4Q5BKX6 768 aa11.35□□□□□ -0.59
CCDC40-207ENST00000572253 SPDYAQ5MJ70 313 aa11.35□□□□□ -0.59
CCDC40-207ENST00000572253 HP1BP3Q5SSJ5 553 aaPredicted RBP11.35□□□□□ -0.59
CCDC40-207ENST00000572253 TMEM63BQ5T3F8 832 aa11.35□□□□□ -0.59
CCDC40-207ENST00000572253 SLC39A4Q6P5W5 647 aa11.35□□□□□ -0.59
CCDC40-207ENST00000572253 LVRNQ6Q4G3 990 aa11.35□□□□□ -0.59
CCDC40-207ENST00000572253 RBBP8NLQ8NC74 664 aaPredicted RBP11.35□□□□□ -0.59
CCDC40-207ENST00000572253 ZNF398Q8TD17 642 aa11.35□□□□□ -0.59
CCDC40-207ENST00000572253 CLEC4DQ8WXI8 215 aa11.35□□□□□ -0.59
CCDC40-207ENST00000572253 TAAR1Q96RJ0 339 aa11.35□□□□□ -0.59
CCDC40-207ENST00000572253 RMDN3Q96TC7 470 aa11.35□□□□□ -0.59
CCDC40-207ENST00000572253 FHDC1Q9C0D6 1143 aaPredicted RBP11.35□□□□□ -0.59
CCDC40-207ENST00000572253 CORO1CQ9ULV4 474 aaPredicted RBP11.35□□□□□ -0.59
CCDC40-207ENST00000572253 RBBP6Q7Z6E9 1792 aaKnown RBP11.35□□□□□ -0.59
CCDC40-207ENST00000572253 SPDYE2BA6NHP3 402 aa11.35□□□□□ -0.59
CCDC40-207ENST00000572253 ZBED4O75132 1171 aa11.35□□□□□ -0.59
CCDC40-207ENST00000572253 DGAT1O75907 488 aa11.35□□□□□ -0.59
CCDC40-207ENST00000572253 SPDYE6P0CI01 402 aa11.35□□□□□ -0.59
CCDC40-207ENST00000572253 KRT10P13645 584 aa11.35□□□□□ -0.59
CCDC40-207ENST00000572253 PSEN1P49768 467 aa11.35□□□□□ -0.59
CCDC40-207ENST00000572253 VCPP55072 806 aaKnown RBP11.35□□□□□ -0.59
CCDC40-207ENST00000572253 IRX1P78414 480 aaPredicted RBP11.35□□□□□ -0.59
CCDC40-207ENST00000572253 MOGSQ13724 837 aa11.35□□□□□ -0.59
CCDC40-207ENST00000572253 BLMHQ13867 455 aa11.35□□□□□ -0.59
CCDC40-207ENST00000572253 HIF1AQ16665 826 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms