RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 SCAF8Q9UPN6 1271 aaKnown RBP18.47■□□□□ 0.55
SCARF1-205ENST00000571272 WDR91A4D1P6 747 aa18.46■□□□□ 0.55
SCARF1-205ENST00000571272 H0Y3Z8 333 aa18.46■□□□□ 0.55
SCARF1-205ENST00000571272 MAGEB2O15479 319 aa18.46■□□□□ 0.55
SCARF1-205ENST00000571272 GM2AP17900 193 aa18.46■□□□□ 0.55
SCARF1-205ENST00000571272 GNA15P30679 374 aa18.46■□□□□ 0.55
SCARF1-205ENST00000571272 NOMO3P69849 1222 aa18.46■□□□□ 0.55
SCARF1-205ENST00000571272 MTM1Q13496 603 aa18.46■□□□□ 0.55
SCARF1-205ENST00000571272 ZNF677Q86XU0 584 aa18.46■□□□□ 0.55
SCARF1-205ENST00000571272 FAM13CQ8NE31 585 aa18.46■□□□□ 0.55
SCARF1-205ENST00000571272 ANKEF1Q9NU02 776 aa18.46■□□□□ 0.55
SCARF1-205ENST00000571272 EDF1O60869 148 aaKnown RBP18.46■□□□□ 0.55
SCARF1-205ENST00000571272 POTEJP0CG39 1038 aa18.46■□□□□ 0.55
SCARF1-205ENST00000571272 T-ENOLP0DO92 83 aa18.46■□□□□ 0.55
SCARF1-205ENST00000571272 EPHB2P29323 1055 aa18.46■□□□□ 0.55
SCARF1-205ENST00000571272 PLCB3Q01970 1234 aa18.46■□□□□ 0.55
SCARF1-205ENST00000571272 PGM5Q15124 567 aa18.46■□□□□ 0.55
SCARF1-205ENST00000571272 PDK4Q16654 411 aa18.46■□□□□ 0.55
SCARF1-205ENST00000571272 HHATQ5VTY9 493 aa18.46■□□□□ 0.55
SCARF1-205ENST00000571272 TDRD10Q5VZ19 366 aaKnown RBP18.46■□□□□ 0.55
SCARF1-205ENST00000571272 LONP2Q86WA8 852 aa18.46■□□□□ 0.55
SCARF1-205ENST00000571272 TBC1D10AQ9BXI6 508 aa18.46■□□□□ 0.55
SCARF1-205ENST00000571272 MRPL47Q9HD33 250 aaKnown RBP18.46■□□□□ 0.55
SCARF1-205ENST00000571272 ZNF70Q9UC06 446 aaPredicted RBP18.46■□□□□ 0.55
SCARF1-205ENST00000571272 SPDYE2BA6NHP3 402 aa18.45■□□□□ 0.54
SCARF1-205ENST00000571272 PLA2G6O60733 806 aa18.45■□□□□ 0.54
SCARF1-205ENST00000571272 KRT1P04264 644 aa18.45■□□□□ 0.54
SCARF1-205ENST00000571272 SPDYE6P0CI01 402 aa18.45■□□□□ 0.54
SCARF1-205ENST00000571272 ALDH3A1P30838 453 aa18.45■□□□□ 0.54
SCARF1-205ENST00000571272 PSMC4P43686 418 aa18.45■□□□□ 0.54
SCARF1-205ENST00000571272 BPIFB4P59827 614 aa18.45■□□□□ 0.54
SCARF1-205ENST00000571272 TAB3Q8N5C8 712 aaPredicted RBP18.45■□□□□ 0.54
SCARF1-205ENST00000571272 FAM151AQ8WW52 585 aa18.45■□□□□ 0.54
SCARF1-205ENST00000571272 SLC7A6OSQ96CW6 309 aaPredicted RBP18.45■□□□□ 0.54
SCARF1-205ENST00000571272 ZNF341Q9BYN7 854 aa18.45■□□□□ 0.54
SCARF1-205ENST00000571272 DEFB129Q9H1M3 183 aa18.45■□□□□ 0.54
SCARF1-205ENST00000571272 GABBR1Q9UBS5 961 aa18.45■□□□□ 0.54
SCARF1-205ENST00000571272 TELO2Q9Y4R8 837 aa18.45■□□□□ 0.54
SCARF1-205ENST00000571272 PTPRJQ12913 1337 aa18.45■□□□□ 0.54
SCARF1-205ENST00000571272 PRPF4O43172 522 aaKnown RBP eCLIP18.45■□□□□ 0.54
SCARF1-205ENST00000571272 UPP2O95045 317 aa18.45■□□□□ 0.54
SCARF1-205ENST00000571272 PDIA2Q13087 525 aaKnown RBP18.45■□□□□ 0.54
SCARF1-205ENST00000571272 NR1H3Q13133 447 aa18.45■□□□□ 0.54
SCARF1-205ENST00000571272 PARP6Q2NL67 630 aa18.45■□□□□ 0.54
SCARF1-205ENST00000571272 C15orf39Q6ZRI6 1047 aa18.45■□□□□ 0.54
SCARF1-205ENST00000571272 ABRAQ8N0Z2 381 aa18.45■□□□□ 0.54
SCARF1-205ENST00000571272 RMDN3Q96TC7 470 aa18.45■□□□□ 0.54
SCARF1-205ENST00000571272 MAK16Q9BXY0 300 aaKnown RBP18.45■□□□□ 0.54
SCARF1-205ENST00000571272 APOBEC3GQ9HC16 384 aaKnown RBP18.45■□□□□ 0.54
SCARF1-205ENST00000571272 UBN1Q9NPG3 1134 aa18.45■□□□□ 0.54
SCARF1-205ENST00000571272 IVNS1ABPQ9Y6Y0 642 aa18.45■□□□□ 0.54
SCARF1-205ENST00000571272 ZNF862O60290 1169 aa18.44■□□□□ 0.54
SCARF1-205ENST00000571272 ZC3H11AO75152 810 aaKnown RBP eCLIP18.44■□□□□ 0.54
SCARF1-205ENST00000571272 PEX11AO75192 247 aa18.44■□□□□ 0.54
SCARF1-205ENST00000571272 CHRNA5P30532 468 aa18.44■□□□□ 0.54
SCARF1-205ENST00000571272 CETN2P41208 172 aa18.44■□□□□ 0.54
SCARF1-205ENST00000571272 ABL2P42684 1182 aa18.44■□□□□ 0.54
SCARF1-205ENST00000571272 JAK3P52333 1124 aa18.44■□□□□ 0.54
SCARF1-205ENST00000571272 RAD23BP54727 409 aa18.44■□□□□ 0.54
SCARF1-205ENST00000571272 NLRP11P59045 1033 aaKnown RBP18.44■□□□□ 0.54
SCARF1-205ENST00000571272 TXNRD3NBQ6F5E7 133 aa18.44■□□□□ 0.54
SCARF1-205ENST00000571272 LVRNQ6Q4G3 990 aa18.44■□□□□ 0.54
SCARF1-205ENST00000571272 TAS1R3Q7RTX0 852 aa18.44■□□□□ 0.54
SCARF1-205ENST00000571272 MCF2L2Q86YR7 1114 aa18.44■□□□□ 0.54
SCARF1-205ENST00000571272 AGGF1Q8N302 714 aaeCLIP18.44■□□□□ 0.54
SCARF1-205ENST00000571272 NAF1Q96HR8 494 aaKnown RBP18.44■□□□□ 0.54
SCARF1-205ENST00000571272 TMEM121Q9BTD3 319 aa18.44■□□□□ 0.54
SCARF1-205ENST00000571272 C12orf65Q9H3J6 166 aaKnown RBP18.44■□□□□ 0.54
SCARF1-205ENST00000571272 RNPEPL1Q9HAU8 725 aa18.44■□□□□ 0.54
SCARF1-205ENST00000571272 NPHS2Q9NP85 383 aa18.44■□□□□ 0.54
SCARF1-205ENST00000571272 COL11A2P13942 1736 aaPredicted RBP18.44■□□□□ 0.54
SCARF1-205ENST00000571272 DCTN3O75935 186 aa18.44■□□□□ 0.54
SCARF1-205ENST00000571272 ATP5HO75947 161 aa18.44■□□□□ 0.54
SCARF1-205ENST00000571272 KRT4P19013 534 aa18.44■□□□□ 0.54
SCARF1-205ENST00000571272 ACO1P21399 889 aaKnown RBP18.44■□□□□ 0.54
SCARF1-205ENST00000571272 LMNB2Q03252 620 aa18.44■□□□□ 0.54
SCARF1-205ENST00000571272 ZACNQ401N2 412 aa18.44■□□□□ 0.54
SCARF1-205ENST00000571272 TAF1BQ53T94 588 aaPredicted RBP18.44■□□□□ 0.54
SCARF1-205ENST00000571272 PLEKHA7Q6IQ23 1121 aa18.44■□□□□ 0.54
SCARF1-205ENST00000571272 OTOAQ7RTW8 1153 aa18.44■□□□□ 0.54
SCARF1-205ENST00000571272 FEZF2Q8TBJ5 459 aa18.44■□□□□ 0.54
SCARF1-205ENST00000571272 C10orf82Q8WW14 230 aa18.44■□□□□ 0.54
SCARF1-205ENST00000571272 SLITRK1Q96PX8 696 aa18.44■□□□□ 0.54
SCARF1-205ENST00000571272 NTPCRQ9BSD7 190 aaKnown RBP18.44■□□□□ 0.54
SCARF1-205ENST00000571272 C10orf88Q9H8K7 445 aa18.44■□□□□ 0.54
SCARF1-205ENST00000571272 SMG5Q9UPR3 1016 aaKnown RBP18.44■□□□□ 0.54
SCARF1-205ENST00000571272 GAD2Q05329 585 aa18.44■□□□□ 0.54
SCARF1-205ENST00000571272 EFTUD2Q15029 972 aaKnown RBP eCLIP18.44■□□□□ 0.54
SCARF1-205ENST00000571272 SCARA3Q6AZY7 606 aa18.44■□□□□ 0.54
SCARF1-205ENST00000571272 NLRX1Q86UT6 975 aa18.44■□□□□ 0.54
SCARF1-205ENST00000571272 TTC25Q96NG3 672 aa18.44■□□□□ 0.54
SCARF1-205ENST00000571272 NUDCD1Q96RS6 583 aa18.44■□□□□ 0.54
SCARF1-205ENST00000571272 FOXP3Q9BZS1 431 aa18.44■□□□□ 0.54
SCARF1-205ENST00000571272 DCTN4Q9UJW0 460 aa18.44■□□□□ 0.54
SCARF1-205ENST00000571272 CCDC189A1A4V9 331 aa18.43■□□□□ 0.54
SCARF1-205ENST00000571272 F8VP50 259 aa18.43■□□□□ 0.54
SCARF1-205ENST00000571272 WFS1O76024 890 aa18.43■□□□□ 0.54
SCARF1-205ENST00000571272 VNN1O95497 513 aa18.43■□□□□ 0.54
SCARF1-205ENST00000571272 CALB2P22676 271 aa18.43■□□□□ 0.54
SCARF1-205ENST00000571272 LIG4P49917 911 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms