RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 HIC1Q14526 733 aa11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 PRPSAP1Q14558 356 aa11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 SMAD1Q15797 465 aaKnown RBP11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 KCTD19Q17RG1 926 aaPredicted RBP11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 EP400NLQ6ZTU2 488 aa11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 ZNF677Q86XU0 584 aa11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 TRIML2Q8N7C3 387 aa11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 HAS1Q92839 578 aa11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 SLC5A5Q92911 643 aa11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 ZNF668Q96K58 619 aaPredicted RBP11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 TTYH3Q9C0H2 523 aa11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 MANSC1Q9H8J5 431 aa11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 XPO7Q9UIA9 1087 aaKnown RBP11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 SALL4Q9UJQ4 1053 aa11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 SHBGP04278 402 aa11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 CPA2P48052 419 aa11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 SPP2Q13103 211 aa11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 STXBP2Q15833 593 aa11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 LRRC36Q1X8D7 754 aa11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 STRIP1Q5VSL9 837 aa11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 ARHGAP18Q8N392 663 aa11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 ABTB1Q969K4 478 aaPredicted RBP11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 NSL1Q96IY1 281 aa11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 ZNF302Q9NR11 478 aa11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 ABCF3Q9NUQ8 709 aa11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 ABT1Q9ULW3 272 aaKnown RBP11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 DNAJC8O75937 253 aaPredicted RBP11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 ARP10275 920 aa11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 KRT10P13645 584 aa11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 ELF3P78545 371 aaPredicted RBP11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 DYNC1I2Q13409 638 aaKnown RBP11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 Q4G0T1 1027 aa11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 COBLL1Q53SF7 1204 aa11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 RNF168Q8IYW5 571 aaPredicted RBP11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 PURBQ96QR8 312 aaKnown RBP11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 F5H423 210 aaPredicted RBP11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 SLC12A3P55017 1021 aa11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 GEMIN4P57678 1058 aaKnown RBP11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 STX1BP61266 288 aa11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 ANO5Q75V66 913 aa11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 TAS1R2Q8TE23 839 aa11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 ATXN2LQ8WWM7 1075 aaKnown RBP11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 TMEM143Q96AN5 459 aa11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 NAF1Q96HR8 494 aaKnown RBP11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 LRRC4Q9HBW1 653 aa11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 DONSONQ9NYP3 566 aa11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 HEY2Q9UBP5 337 aa11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 ZC3H7BQ9UGR2 993 aaKnown RBP11.7□□□□□ -0.54
PCDHGA4-201ENST00000571252 KIAA0391O15091 583 aaKnown RBP11.69□□□□□ -0.54
PCDHGA4-201ENST00000571252 TLR2O60603 784 aa11.69□□□□□ -0.54
PCDHGA4-201ENST00000571252 SKAP2O75563 359 aaPredicted RBP11.69□□□□□ -0.54
PCDHGA4-201ENST00000571252 TYK2P29597 1187 aa11.69□□□□□ -0.54
PCDHGA4-201ENST00000571252 VHLP40337 213 aa11.69□□□□□ -0.54
PCDHGA4-201ENST00000571252 PREPLQ4J6C6 727 aaPredicted RBP11.69□□□□□ -0.54
PCDHGA4-201ENST00000571252 IRF2BP2Q7Z5L9 587 aa11.69□□□□□ -0.54
PCDHGA4-201ENST00000571252 HDAC11Q96DB2 347 aa11.69□□□□□ -0.54
PCDHGA4-201ENST00000571252 MRPL4Q9BYD3 311 aaKnown RBP11.69□□□□□ -0.54
PCDHGA4-201ENST00000571252 SNX25Q9H3E2 840 aa11.69□□□□□ -0.54
PCDHGA4-201ENST00000571252 TBX20Q9UMR3 447 aa11.69□□□□□ -0.54
PCDHGA4-201ENST00000571252 C15orf41Q9Y2V0 281 aa11.69□□□□□ -0.54
PCDHGA4-201ENST00000571252 AFG3L2Q9Y4W6 797 aa11.69□□□□□ -0.54
PCDHGA4-201ENST00000571252 ENTPD3O75355 529 aa11.69□□□□□ -0.54
PCDHGA4-201ENST00000571252 SMTNL2Q2TAL5 461 aa11.69□□□□□ -0.54
PCDHGA4-201ENST00000571252 WDR72Q3MJ13 1102 aa11.69□□□□□ -0.54
PCDHGA4-201ENST00000571252 DNAL1Q4LDG9 190 aa11.69□□□□□ -0.54
PCDHGA4-201ENST00000571252 CBWD6Q4V339 395 aa11.69□□□□□ -0.54
PCDHGA4-201ENST00000571252 CBWD3Q5JTY5 395 aa11.69□□□□□ -0.54
PCDHGA4-201ENST00000571252 SPDYCQ5MJ68 293 aa11.69□□□□□ -0.54
PCDHGA4-201ENST00000571252 CBWD5Q5RIA9 395 aa11.69□□□□□ -0.54
PCDHGA4-201ENST00000571252 HGSNATQ68CP4 663 aa11.69□□□□□ -0.54
PCDHGA4-201ENST00000571252 HEATR6Q6AI08 1181 aaKnown RBP11.69□□□□□ -0.54
PCDHGA4-201ENST00000571252 CENPTQ96BT3 561 aa11.69□□□□□ -0.54
PCDHGA4-201ENST00000571252 ACSF2Q96CM8 615 aaPredicted RBP11.69□□□□□ -0.54
PCDHGA4-201ENST00000571252 FAM86B1E9PN63 330 aa11.69□□□□□ -0.54
PCDHGA4-201ENST00000571252 H3BRJ5 948 aa11.69□□□□□ -0.54
PCDHGA4-201ENST00000571252 FAM86B2P0C5J1 330 aa11.69□□□□□ -0.54
PCDHGA4-201ENST00000571252 ALDH5A1P51649 535 aaPredicted RBP11.69□□□□□ -0.54
PCDHGA4-201ENST00000571252 ITKQ08881 620 aa11.69□□□□□ -0.54
PCDHGA4-201ENST00000571252 STX3Q13277 289 aa11.69□□□□□ -0.54
PCDHGA4-201ENST00000571252 RCN1Q15293 331 aa11.69□□□□□ -0.54
PCDHGA4-201ENST00000571252 SLC35G1Q2M3R5 365 aa11.69□□□□□ -0.54
PCDHGA4-201ENST00000571252 AADACL2Q6P093 401 aa11.69□□□□□ -0.54
PCDHGA4-201ENST00000571252 OR6B3Q8NGW1 331 aa11.69□□□□□ -0.54
PCDHGA4-201ENST00000571252 DHX38Q92620 1227 aaKnown RBP11.69□□□□□ -0.54
PCDHGA4-201ENST00000571252 OLFM3Q96PB7 478 aa11.69□□□□□ -0.54
PCDHGA4-201ENST00000571252 POP1Q99575 1024 aaKnown RBP11.69□□□□□ -0.54
PCDHGA4-201ENST00000571252 JPH1Q9HDC5 661 aaPredicted RBP11.69□□□□□ -0.54
PCDHGA4-201ENST00000571252 FBXO28Q9NVF7 368 aa11.69□□□□□ -0.54
PCDHGA4-201ENST00000571252 SLIT2O94813 1529 aa11.69□□□□□ -0.54
PCDHGA4-201ENST00000571252 COL14A1Q05707 1796 aaKnown RBP11.69□□□□□ -0.54
PCDHGA4-201ENST00000571252 KCNN4O15554 427 aa11.68□□□□□ -0.54
PCDHGA4-201ENST00000571252 SNX3O60493 162 aa11.68□□□□□ -0.54
PCDHGA4-201ENST00000571252 GYS1P13807 737 aa11.68□□□□□ -0.54
PCDHGA4-201ENST00000571252 DRD4P21917 467 aa11.68□□□□□ -0.54
PCDHGA4-201ENST00000571252 CTCFP49711 727 aaPredicted RBP11.68□□□□□ -0.54
PCDHGA4-201ENST00000571252 AP3M2P53677 418 aa11.68□□□□□ -0.54
PCDHGA4-201ENST00000571252 MYBPC2Q14324 1141 aa11.68□□□□□ -0.54
PCDHGA4-201ENST00000571252 ICA1LQ8NDH6 482 aa11.68□□□□□ -0.54
PCDHGA4-201ENST00000571252 SPATA18Q8TC71 538 aa11.68□□□□□ -0.54
PCDHGA4-201ENST00000571252 PNMA3Q9UL41 463 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms