RNA–Protein interactions for RNA: ENST00000570740.1

CDC27-211, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-211ENST00000570740 SESN2P58004 480 aaPredicted RBP4.33□□□□□ -1.72
CDC27-211ENST00000570740 TMF1P82094 1093 aa4.33□□□□□ -1.72
CDC27-211ENST00000570740 SLC6A3Q01959 620 aa4.33□□□□□ -1.72
CDC27-211ENST00000570740 ROR2Q01974 943 aaKnown RBP4.33□□□□□ -1.72
CDC27-211ENST00000570740 ROM1Q03395 351 aa4.33□□□□□ -1.72
CDC27-211ENST00000570740 IFT88Q13099 833 aa4.33□□□□□ -1.72
CDC27-211ENST00000570740 ADAM15Q13444 863 aa4.33□□□□□ -1.72
CDC27-211ENST00000570740 FOXE3Q13461 319 aa4.33□□□□□ -1.72
CDC27-211ENST00000570740 DRP2Q13474 957 aa4.33□□□□□ -1.72
CDC27-211ENST00000570740 PRPF4BQ13523 1007 aaKnown RBP4.33□□□□□ -1.72
CDC27-211ENST00000570740 TUBB2AQ13885 445 aa4.33□□□□□ -1.72
CDC27-211ENST00000570740 DCTN1Q14203 1278 aa4.33□□□□□ -1.72
CDC27-211ENST00000570740 GRM7Q14831 915 aa4.33□□□□□ -1.72
CDC27-211ENST00000570740 MIIPQ5JXC2 388 aa4.33□□□□□ -1.72
CDC27-211ENST00000570740 SH2D4BQ5SQS7 431 aa4.33□□□□□ -1.72
CDC27-211ENST00000570740 CCDC183Q5T5S1 534 aa4.33□□□□□ -1.72
CDC27-211ENST00000570740 PIK3R6Q5UE93 754 aa4.33□□□□□ -1.72
CDC27-211ENST00000570740 NUGGCQ68CJ6 796 aa4.33□□□□□ -1.72
CDC27-211ENST00000570740 KLHDC10Q6PID8 442 aa4.33□□□□□ -1.72
CDC27-211ENST00000570740 LRRC31Q6UY01 552 aa4.33□□□□□ -1.72
CDC27-211ENST00000570740 USP51Q70EK9 711 aa4.33□□□□□ -1.72
CDC27-211ENST00000570740 ARHGAP22Q7Z5H3 698 aa4.33□□□□□ -1.72
CDC27-211ENST00000570740 LRRC49Q8IUZ0 686 aa4.33□□□□□ -1.72
CDC27-211ENST00000570740 DRC7Q8IY82 874 aa4.33□□□□□ -1.72
CDC27-211ENST00000570740 PRPF38AQ8NAV1 312 aaKnown RBP4.33□□□□□ -1.72
CDC27-211ENST00000570740 CCDC150Q8NCX0 1101 aa4.33□□□□□ -1.72
CDC27-211ENST00000570740 SHCBP1Q8NEM2 672 aa4.33□□□□□ -1.72
CDC27-211ENST00000570740 EXTL1Q92935 676 aa4.33□□□□□ -1.72
CDC27-211ENST00000570740 GTF3C6Q969F1 213 aa4.33□□□□□ -1.72
CDC27-211ENST00000570740 ZNF503Q96F45 646 aa4.33□□□□□ -1.72
CDC27-211ENST00000570740 C16orf92Q96LL3 132 aa4.33□□□□□ -1.72
CDC27-211ENST00000570740 ANKRD27Q96NW4 1050 aa4.33□□□□□ -1.72
CDC27-211ENST00000570740 ALS2CR12Q96Q35 445 aa4.33□□□□□ -1.72
CDC27-211ENST00000570740 TESK2Q96S53 571 aa4.33□□□□□ -1.72
CDC27-211ENST00000570740 TCHPQ9BT92 498 aa4.33□□□□□ -1.72
CDC27-211ENST00000570740 TUBB2BQ9BVA1 445 aa4.33□□□□□ -1.72
CDC27-211ENST00000570740 MOV10L1Q9BXT6 1211 aaKnown RBP4.33□□□□□ -1.72
CDC27-211ENST00000570740 ZSWIM4Q9H7M6 989 aa4.33□□□□□ -1.72
CDC27-211ENST00000570740 CABP5Q9NP86 173 aa4.33□□□□□ -1.72
CDC27-211ENST00000570740 SAE1Q9UBE0 346 aaPredicted RBP4.33□□□□□ -1.72
CDC27-211ENST00000570740 B4GALT6Q9UBX8 382 aa4.33□□□□□ -1.72
CDC27-211ENST00000570740 ZNF215Q9UL58 517 aaPredicted RBP4.33□□□□□ -1.72
CDC27-211ENST00000570740 NWD2Q9ULI1 1742 aa4.32□□□□□ -1.72
CDC27-211ENST00000570740 CPSF1Q10570 1443 aaKnown RBP4.32□□□□□ -1.72
CDC27-211ENST00000570740 PPIP5K1Q6PFW1 1433 aa4.32□□□□□ -1.72
CDC27-211ENST00000570740 USP47Q96K76 1375 aa4.32□□□□□ -1.72
CDC27-211ENST00000570740 MAP3K5Q99683 1374 aa4.32□□□□□ -1.72
CDC27-211ENST00000570740 ST20-MTHFSA0A0A6YYL1 179 aa4.32□□□□□ -1.72
CDC27-211ENST00000570740 GOLGA6L10A0A0M3HER8 536 aa4.32□□□□□ -1.72
CDC27-211ENST00000570740 UBA6A0AVT1 1052 aaPredicted RBP4.32□□□□□ -1.72
CDC27-211ENST00000570740 TMEM232C9JQI7 657 aa4.32□□□□□ -1.72
CDC27-211ENST00000570740 PLIN1O60240 522 aa4.32□□□□□ -1.72
CDC27-211ENST00000570740 KDM1AO60341 852 aa4.32□□□□□ -1.72
CDC27-211ENST00000570740 H2AFYO75367 372 aaKnown RBP4.32□□□□□ -1.72
CDC27-211ENST00000570740 SLPIP03973 132 aa4.32□□□□□ -1.72
CDC27-211ENST00000570740 VIL1P09327 827 aaKnown RBP4.32□□□□□ -1.72
CDC27-211ENST00000570740 CCDC159P0C7I6 412 aa4.32□□□□□ -1.72
CDC27-211ENST00000570740 IDO1P14902 403 aa4.32□□□□□ -1.72
CDC27-211ENST00000570740 MX1P20591 662 aa4.32□□□□□ -1.72
CDC27-211ENST00000570740 MCM3P25205 808 aa4.32□□□□□ -1.72
CDC27-211ENST00000570740 STIP1P31948 543 aaKnown RBP4.32□□□□□ -1.72
CDC27-211ENST00000570740 CCNHP51946 323 aaPredicted RBP4.32□□□□□ -1.72
CDC27-211ENST00000570740 RHBDL3P58872 404 aa4.32□□□□□ -1.72
CDC27-211ENST00000570740 NUCB1Q02818 461 aa4.32□□□□□ -1.72
CDC27-211ENST00000570740 FOXD4Q12950 439 aaPredicted RBP4.32□□□□□ -1.72
CDC27-211ENST00000570740 PABPC4Q13310 644 aaKnown RBP eCLIP4.32□□□□□ -1.724e-7■□□□□ 8
CDC27-211ENST00000570740 ZNF174Q15697 407 aa4.32□□□□□ -1.72
CDC27-211ENST00000570740 NRN1LQ496H8 165 aa4.32□□□□□ -1.72
CDC27-211ENST00000570740 C4orf46Q504U0 113 aa4.32□□□□□ -1.72
CDC27-211ENST00000570740 TTC38Q5R3I4 469 aa4.32□□□□□ -1.72
CDC27-211ENST00000570740 MEX3CQ5U5Q3 659 aaKnown RBP4.32□□□□□ -1.72
CDC27-211ENST00000570740 CDCA2Q69YH5 1023 aaPredicted RBP4.32□□□□□ -1.72
CDC27-211ENST00000570740 SYNE3Q6ZMZ3 975 aa4.32□□□□□ -1.72
CDC27-211ENST00000570740 UBE2R2Q712K3 238 aaPredicted RBP4.32□□□□□ -1.72
CDC27-211ENST00000570740 ARMC9Q7Z3E5 817 aa4.32□□□□□ -1.72
CDC27-211ENST00000570740 HDGFL2Q7Z4V5 671 aaPredicted RBP4.32□□□□□ -1.72
CDC27-211ENST00000570740 ADGRE4PQ86SQ3 457 aa4.32□□□□□ -1.72
CDC27-211ENST00000570740 CCDC146Q8IYE0 955 aa4.32□□□□□ -1.72
CDC27-211ENST00000570740 ZNF808Q8N4W9 903 aaPredicted RBP4.32□□□□□ -1.72
CDC27-211ENST00000570740 TEX9Q8N6V9 391 aa4.32□□□□□ -1.72
CDC27-211ENST00000570740 KIAA1958Q8N8K9 716 aa4.32□□□□□ -1.72
CDC27-211ENST00000570740 C3orf20Q8ND61 904 aa4.32□□□□□ -1.72
CDC27-211ENST00000570740 TRIM58Q8NG06 486 aa4.32□□□□□ -1.72
CDC27-211ENST00000570740 OR5AN1Q8NGI8 311 aa4.32□□□□□ -1.72
CDC27-211ENST00000570740 ERMNQ8TAM6 284 aa4.32□□□□□ -1.72
CDC27-211ENST00000570740 FAM71BQ8TC56 605 aa4.32□□□□□ -1.72
CDC27-211ENST00000570740 CCHCR1Q8TD31 782 aa4.32□□□□□ -1.72
CDC27-211ENST00000570740 RTF1Q92541 710 aaKnown RBP4.32□□□□□ -1.72
CDC27-211ENST00000570740 RABGGTAQ92696 567 aa4.32□□□□□ -1.72
CDC27-211ENST00000570740 CCDC47Q96A33 483 aaKnown RBP4.32□□□□□ -1.72
CDC27-211ENST00000570740 THOC1Q96FV9 657 aaKnown RBP4.32□□□□□ -1.72
CDC27-211ENST00000570740 FAM81BQ96LP2 452 aa4.32□□□□□ -1.72
CDC27-211ENST00000570740 SCLT1Q96NL6 688 aa4.32□□□□□ -1.72
CDC27-211ENST00000570740 TRIM4Q9C037 500 aa4.32□□□□□ -1.72
CDC27-211ENST00000570740 NAT10Q9H0A0 1025 aaKnown RBP4.32□□□□□ -1.72
CDC27-211ENST00000570740 BHMT2Q9H2M3 363 aa4.32□□□□□ -1.72
CDC27-211ENST00000570740 PCIF1Q9H4Z3 704 aa4.32□□□□□ -1.72
CDC27-211ENST00000570740 RETREG1Q9H6L5 497 aa4.32□□□□□ -1.72
CDC27-211ENST00000570740 AGO3Q9H9G7 860 aaKnown RBP4.32□□□□□ -1.72
CDC27-211ENST00000570740 ATP6V0A4Q9HBG4 840 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms