RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 DGKIO75912 1065 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 ASS1P00966 412 aaKnown RBP7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 C4BPAP04003 597 aaKnown RBP7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 CCDC172P0C7W6 258 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 ODC1P11926 461 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 KRT5P13647 590 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 UCHL3P15374 230 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 LAG3P18627 525 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 PAX3P23760 479 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 PON1P27169 355 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 LRPAP1P30533 357 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 PPM1AP35813 382 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 GATMP50440 423 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 GSDMDP57764 484 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 MYL6P60660 151 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 POLR2FP61218 127 aaKnown RBP7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 GCNT1Q02742 428 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 PTPN21Q16825 1174 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 WDR72Q3MJ13 1102 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 C9orf57Q5W0N0 161 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 ALKAL1Q6UXT8 129 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 DSTYKQ6XUX3 929 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 C15orf39Q6ZRI6 1047 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 CMTR2Q8IYT2 770 aaKnown RBP7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 TTC39CQ8N584 583 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 EHBP1Q8NDI1 1231 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 PHOSPHO2Q8TCD6 241 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 HASPINQ8TF76 798 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 TOP1MTQ969P6 601 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 ZNF558Q96NG5 402 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 CASD1Q96PB1 797 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 TMEM175Q9BSA9 504 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 PI4K2AQ9BTU6 479 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 SLC6A16Q9GZN6 736 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 NUCKS1Q9H1E3 243 aaKnown RBP7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 NLRC4Q9NPP4 1024 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 PLCB1Q9NQ66 1216 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 EVA1BQ9NVM1 165 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 ZNHIT6Q9NWK9 470 aaKnown RBP7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 IMPACTQ9P2X3 320 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 NXF1Q9UBU9 619 aaKnown RBP7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 PLAGL2Q9UPG8 496 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 SIK3Q9Y2K2 1263 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 LUC7L2Q9Y383 392 aaKnown RBP7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 COQ4Q9Y3A0 265 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 SNX9Q9Y5X1 595 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 RALGAPA2Q2PPJ7 1873 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 KAT6AQ92794 2004 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 LTBP2Q14767 1821 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 SF3B1O75533 1304 aaKnown RBP eCLIP7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 KPNA7A9QM74 516 aa7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 AKR1B15C9JRZ8 316 aaPredicted RBP7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 RBAK-RBAKDNI3L0D1 243 aa7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 MFAP3LO75121 409 aa7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 LRRN2O75325 713 aa7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 B3GAT3O94766 335 aa7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 KIF4AO95239 1232 aa7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 GJB5O95377 273 aa7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 VNN1O95497 513 aa7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 STAU1O95793 577 aaKnown RBP7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 CD58P19256 250 aa7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 SLC9A1P19634 815 aa7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 CASP14P31944 242 aa7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 USP8P40818 1118 aa7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 STAT1P42224 750 aa7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 ALDH7A1P49419 539 aaKnown RBP7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 KLK7P49862 253 aa7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 CLCNKBP51801 687 aa7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 EPHB4P54760 987 aa7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 MCCD1P59942 119 aaPredicted RBP7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 SOX4Q06945 474 aaPredicted RBP7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 ELAVL2Q12926 359 aaKnown RBP7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 CUL2Q13617 745 aa7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 ZBTB6Q15916 424 aa7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 ASIC2Q16515 512 aa7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 ARHGAP44Q17R89 818 aa7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 TDRD12Q587J7 1177 aaKnown RBP7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 FIGNQ5HY92 759 aa7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 KLHDC7AQ5VTJ3 777 aa7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 SPOPLQ6IQ16 392 aa7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 RRAGAQ7L523 313 aa7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 TMCO2Q7Z6W1 182 aaPredicted RBP7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 METTL23Q86XA0 190 aa7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 HERC6Q8IVU3 1022 aa7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 ADGRF2Q8IZF7 708 aa7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 FIBCD1Q8N539 461 aa7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 GSTCDQ8NEC7 633 aa7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 APPL2Q8NEU8 664 aa7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 CPLX3Q8WVH0 158 aa7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 SEMA4DQ92854 862 aa7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 TMEM169Q96HH4 297 aa7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 COLEC11Q9BWP8 271 aa7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 GANQ9H2C0 597 aa7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 UBE2TQ9NPD8 197 aaPredicted RBP7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 PRDM9Q9NQV7 894 aa7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 CXXC1Q9P0U4 656 aaPredicted RBP7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 SIX4Q9UIU6 781 aa7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 FBXL5Q9UKA1 691 aa7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 DNAJC12Q9UKB3 198 aa7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 DSEQ9UL01 958 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms