RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 VASH1Q7L8A9 365 aaPredicted RBP8.56□□□□□ -1.04
TCF4-246ENST00000570287 OTUD6AQ7L8S5 288 aa8.56□□□□□ -1.04
TCF4-246ENST00000570287 SPATA4Q8NEY3 305 aa8.56□□□□□ -1.04
TCF4-246ENST00000570287 ERMNQ8TAM6 284 aa8.56□□□□□ -1.04
TCF4-246ENST00000570287 ETNPPLQ8TBG4 499 aa8.56□□□□□ -1.04
TCF4-246ENST00000570287 CAPZA3Q96KX2 299 aa8.56□□□□□ -1.04
TCF4-246ENST00000570287 CCDC42Q96M95 316 aa8.56□□□□□ -1.04
TCF4-246ENST00000570287 PLEKHG4BQ96PX9 1271 aa8.56□□□□□ -1.04
TCF4-246ENST00000570287 RUFY1Q96T51 708 aa8.56□□□□□ -1.04
TCF4-246ENST00000570287 CENPHQ9H3R5 247 aa8.56□□□□□ -1.04
TCF4-246ENST00000570287 PCDHA2Q9Y5H9 948 aa8.56□□□□□ -1.04
TCF4-246ENST00000570287 POTEB3A0JP26 581 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 SPDYE3A6NKU9 549 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 PYGMP11217 842 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 FSHRP23945 695 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 SREBF1P36956 1147 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 VAV2P52735 878 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 SH3BP2P78314 561 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 PTPN11Q06124 597 aaPredicted RBP8.55□□□□□ -1.04
TCF4-246ENST00000570287 SPA17Q15506 151 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 AOC3Q16853 763 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 WDR45BQ5MNZ6 344 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 GPR158Q5T848 1215 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 KIAA1211LQ6NV74 962 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 POTEBQ6S5H4 581 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 GPBP1Q86WP2 473 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 KIRREL3Q8IZU9 778 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 MYCT1Q8N699 235 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 NSMCE1Q8WV22 266 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 SCLYQ96I15 445 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 FAM20AQ96MK3 541 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 SPAG5Q96R06 1193 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 AP1M1Q9BXS5 423 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 TDRD3Q9H7E2 651 aaKnown RBP8.55□□□□□ -1.04
TCF4-246ENST00000570287 MMRN2Q9H8L6 949 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 NDOR1Q9UHB4 597 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 BLACEA4D250 179 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 GMNCA6NCL1 334 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 MED24O75448 989 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 MTA2O94776 668 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 LCA5LO95447 670 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 CPEP16870 476 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 CYP11B2P19099 503 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 HOXD10P28358 340 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 CIITAP33076 1130 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 TSPAN7P41732 249 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 GRIA4P48058 902 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 CCNG1P51959 295 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 SPIRE1Q08AE8 756 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 ZNF772Q68DY9 489 aaPredicted RBP8.55□□□□□ -1.04
TCF4-246ENST00000570287 CAPRIN2Q6IMN6 1127 aaKnown RBP8.55□□□□□ -1.04
TCF4-246ENST00000570287 PPM1KQ8N3J5 372 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 IPCEF1Q8WWN9 437 aaPredicted RBP8.55□□□□□ -1.04
TCF4-246ENST00000570287 HHIPQ96QV1 700 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 HERC5Q9UII4 1024 aaKnown RBP8.55□□□□□ -1.04
TCF4-246ENST00000570287 SLC12A4Q9UP95 1085 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 RGPD3A6NKT7 1758 aaPredicted RBP8.55□□□□□ -1.04
TCF4-246ENST00000570287 RGPD4Q7Z3J3 1758 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 A0A1W2PQU0 124 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 TRAF5O00463 557 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 USO1O60763 962 aaKnown RBP8.55□□□□□ -1.04
TCF4-246ENST00000570287 RTN3O95197 1032 aaPredicted RBP8.55□□□□□ -1.04
TCF4-246ENST00000570287 GH2P01242 217 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 GSTA1P08263 222 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 RPA1P27694 616 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 SLC12A3P55017 1021 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 KIF5AQ12840 1032 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 IKQ13123 557 aaPredicted RBP8.55□□□□□ -1.04
TCF4-246ENST00000570287 PRR16Q569H4 304 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 SLC45A4Q5BKX6 768 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 HERC4Q5GLZ8 1057 aaPredicted RBP8.55□□□□□ -1.04
TCF4-246ENST00000570287 ZC3H3Q8IXZ2 948 aaKnown RBP8.55□□□□□ -1.04
TCF4-246ENST00000570287 KCT2Q8NC54 265 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 FLCNQ8NFG4 579 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 SGCZQ96LD1 299 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 ZNF570Q96NI8 536 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 P2RX7Q99572 595 aaKnown RBP8.55□□□□□ -1.04
TCF4-246ENST00000570287 LRRC3Q9BY71 257 aa8.55□□□□□ -1.04
TCF4-246ENST00000570287 FAM207AQ9NSI2 230 aaPredicted RBP8.55□□□□□ -1.04
TCF4-246ENST00000570287 F8VZ95 297 aa8.54□□□□□ -1.04
TCF4-246ENST00000570287 CYP3A4P08684 503 aa8.54□□□□□ -1.04
TCF4-246ENST00000570287 CCND1P24385 295 aa8.54□□□□□ -1.04
TCF4-246ENST00000570287 CHRNA5P30532 468 aa8.54□□□□□ -1.04
TCF4-246ENST00000570287 HIRAP54198 1017 aaPredicted RBP8.54□□□□□ -1.04
TCF4-246ENST00000570287 FNDC3BQ53EP0 1204 aaKnown RBP8.54□□□□□ -1.04
TCF4-246ENST00000570287 KCTD16Q68DU8 428 aa8.54□□□□□ -1.04
TCF4-246ENST00000570287 MYLK4Q86YV6 388 aaPredicted RBP8.54□□□□□ -1.04
TCF4-246ENST00000570287 LENG9Q96B70 501 aa8.54□□□□□ -1.04
TCF4-246ENST00000570287 PRMT6Q96LA8 375 aaPredicted RBP8.54□□□□□ -1.04
TCF4-246ENST00000570287 LACRTQ9GZZ8 138 aa8.54□□□□□ -1.04
TCF4-246ENST00000570287 ARHGAP20Q9P2F6 1191 aa8.54□□□□□ -1.04
TCF4-246ENST00000570287 FAM155AB1AL88 458 aaPredicted RBP8.54□□□□□ -1.04
TCF4-246ENST00000570287 TISP43B9A030 160 aa8.54□□□□□ -1.04
TCF4-246ENST00000570287 B9A039 149 aa8.54□□□□□ -1.04
TCF4-246ENST00000570287 E7EVH7 732 aa8.54□□□□□ -1.04
TCF4-246ENST00000570287 EPHB6O15197 1021 aa8.54□□□□□ -1.04
TCF4-246ENST00000570287 RPSAP08865 295 aaKnown RBP8.54□□□□□ -1.04
TCF4-246ENST00000570287 BLMHQ13867 455 aa8.54□□□□□ -1.04
TCF4-246ENST00000570287 EDRF1Q3B7T1 1238 aa8.54□□□□□ -1.04
TCF4-246ENST00000570287 USH1GQ495M9 461 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms