RNA–Protein interactions for RNA: ENST00000569615.2

UTP4-215, Transcript of UTP4, small subunit processome component, human

TSL 3

Gene UTP4, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UTP4-215	ENST00000569615	SLC44A3	Q8N4M1	653 aa		13.74	□□□□□ -0.21
UTP4-215	ENST00000569615	LRRC52	Q8N7C0	313 aa		13.74	□□□□□ -0.21
UTP4-215	ENST00000569615	ZNF507	Q8TCN5	953 aa		13.74	□□□□□ -0.21
UTP4-215	ENST00000569615	C2orf15	Q8WU43	125 aa	Known RBP	13.74	□□□□□ -0.21
UTP4-215	ENST00000569615	CBWD1	Q9BRT8	395 aa		13.74	□□□□□ -0.21
UTP4-215	ENST00000569615	DNMT3B	Q9UBC3	853 aa	Known RBP	13.74	□□□□□ -0.21
UTP4-215	ENST00000569615	ASB3	Q9Y575	518 aa		13.74	□□□□□ -0.21
UTP4-215	ENST00000569615	TIMM13	Q9Y5L4	95 aa	Predicted RBP	13.74	□□□□□ -0.21
UTP4-215	ENST00000569615	MUC6	Q6W4X9	2439 aa		13.74	□□□□□ -0.21
UTP4-215	ENST00000569615	PRPF40A	O75400	957 aa	Known RBP	13.73	□□□□□ -0.21
UTP4-215	ENST00000569615	KIF20A	O95235	890 aa		13.73	□□□□□ -0.21
UTP4-215	ENST00000569615	FGF19	O95750	216 aa		13.73	□□□□□ -0.21
UTP4-215	ENST00000569615	TNNC2	P02585	160 aa		13.73	□□□□□ -0.21
UTP4-215	ENST00000569615	AVPR2	P30518	371 aa		13.73	□□□□□ -0.21
UTP4-215	ENST00000569615	AFM	P43652	599 aa		13.73	□□□□□ -0.21
UTP4-215	ENST00000569615	TUFM	P49411	452 aa	Known RBP	13.73	□□□□□ -0.21
UTP4-215	ENST00000569615	CLCN5	P51795	746 aa		13.73	□□□□□ -0.21
UTP4-215	ENST00000569615	RBP5	P82980	135 aa		13.73	□□□□□ -0.21
UTP4-215	ENST00000569615	PFKP	Q01813	784 aa		13.73	□□□□□ -0.21
UTP4-215	ENST00000569615	TWF1	Q12792	350 aa		13.73	□□□□□ -0.21
UTP4-215	ENST00000569615	MYO1E	Q12965	1108 aa		13.73	□□□□□ -0.21
UTP4-215	ENST00000569615	PSMD2	Q13200	908 aa		13.73	□□□□□ -0.21
UTP4-215	ENST00000569615	HTR4	Q13639	388 aa		13.73	□□□□□ -0.21
UTP4-215	ENST00000569615	RNF19B	Q6ZMZ0	732 aa		13.73	□□□□□ -0.21
UTP4-215	ENST00000569615	ITIH5	Q86UX2	942 aa		13.73	□□□□□ -0.21
UTP4-215	ENST00000569615	DCP1B	Q8IZD4	617 aa	Known RBP	13.73	□□□□□ -0.21
UTP4-215	ENST00000569615	TMEM86A	Q8N2M4	240 aa		13.73	□□□□□ -0.21
UTP4-215	ENST00000569615	FEZF2	Q8TBJ5	459 aa		13.73	□□□□□ -0.21
UTP4-215	ENST00000569615	SPATA18	Q8TC71	538 aa		13.73	□□□□□ -0.21
UTP4-215	ENST00000569615	LEO1	Q8WVC0	666 aa	Predicted RBP	13.73	□□□□□ -0.21
UTP4-215	ENST00000569615	SHD	Q96IW2	340 aa		13.73	□□□□□ -0.21
UTP4-215	ENST00000569615	FNBP1	Q96RU3	617 aa		13.73	□□□□□ -0.21
UTP4-215	ENST00000569615	RTP3	Q9BQQ7	232 aa		13.73	□□□□□ -0.21
UTP4-215	ENST00000569615	CORO1B	Q9BR76	489 aa		13.73	□□□□□ -0.21
UTP4-215	ENST00000569615	GPR88	Q9GZN0	384 aa		13.73	□□□□□ -0.21
UTP4-215	ENST00000569615	PCIF1	Q9H4Z3	704 aa		13.73	□□□□□ -0.21
UTP4-215	ENST00000569615	ASAH2	Q9NR71	780 aa		13.73	□□□□□ -0.21
UTP4-215	ENST00000569615	EXOC1	Q9NV70	894 aa		13.73	□□□□□ -0.21
UTP4-215	ENST00000569615	NUMBL	Q9Y6R0	609 aa		13.73	□□□□□ -0.21
UTP4-215	ENST00000569615	GOLGA8IP	A6NC78	632 aa		13.72	□□□□□ -0.21
UTP4-215	ENST00000569615	GOLGA8J	A6NMD2	632 aa		13.72	□□□□□ -0.21
UTP4-215	ENST00000569615	HUS1	O60921	280 aa		13.72	□□□□□ -0.21
UTP4-215	ENST00000569615	KRT19	P08727	400 aa		13.72	□□□□□ -0.21
UTP4-215	ENST00000569615	NTHL1	P78549	312 aa		13.72	□□□□□ -0.21
UTP4-215	ENST00000569615	TSPY1	Q01534	308 aa		13.72	□□□□□ -0.21
UTP4-215	ENST00000569615	VEPH1	Q14D04	833 aa		13.72	□□□□□ -0.21
UTP4-215	ENST00000569615	DUOXA2	Q1HG44	320 aa		13.72	□□□□□ -0.21
UTP4-215	ENST00000569615	ASTL	Q6HA08	431 aa	Predicted RBP	13.72	□□□□□ -0.21
UTP4-215	ENST00000569615	EPM2AIP1	Q7L775	607 aa	Predicted RBP	13.72	□□□□□ -0.21
UTP4-215	ENST00000569615	NPAS3	Q8IXF0	933 aa		13.72	□□□□□ -0.21
UTP4-215	ENST00000569615	EFCAB13	Q8IY85	973 aa		13.72	□□□□□ -0.21
UTP4-215	ENST00000569615	SIX5	Q8N196	739 aa		13.72	□□□□□ -0.21
UTP4-215	ENST00000569615	CSGALNACT2	Q8N6G5	542 aa		13.72	□□□□□ -0.21
UTP4-215	ENST00000569615	ITFG1	Q8TB96	612 aa		13.72	□□□□□ -0.21
UTP4-215	ENST00000569615	IKZF4	Q9H2S9	585 aa		13.72	□□□□□ -0.21
UTP4-215	ENST00000569615	SLC2A4RG	Q9NR83	387 aa		13.72	□□□□□ -0.21
UTP4-215	ENST00000569615	HCFC1R1	Q9NWW0	138 aa		13.72	□□□□□ -0.21
UTP4-215	ENST00000569615	HSPBP1	Q9NZL4	362 aa		13.72	□□□□□ -0.21
UTP4-215	ENST00000569615	AGAP1	Q9UPQ3	857 aa		13.72	□□□□□ -0.21
UTP4-215	ENST00000569615	YIPF1	Q9Y548	306 aa		13.72	□□□□□ -0.21
UTP4-215	ENST00000569615	ZNF318	Q5VUA4	2279 aa		13.72	□□□□□ -0.21
UTP4-215	ENST00000569615	DOCK8	Q8NF50	2099 aa		13.71	□□□□□ -0.21
UTP4-215	ENST00000569615	STK25	O00506	426 aa		13.71	□□□□□ -0.21
UTP4-215	ENST00000569615	PPEF2	O14830	753 aa		13.71	□□□□□ -0.21
UTP4-215	ENST00000569615	SPTLC1	O15269	473 aa		13.71	□□□□□ -0.21
UTP4-215	ENST00000569615	SEC24A	O95486	1093 aa		13.71	□□□□□ -0.21
UTP4-215	ENST00000569615	ITGB3	P05106	788 aa		13.71	□□□□□ -0.21
UTP4-215	ENST00000569615	POLR2B	P30876	1174 aa	Known RBP	13.71	□□□□□ -0.21
UTP4-215	ENST00000569615	SYK	P43405	635 aa		13.71	□□□□□ -0.21
UTP4-215	ENST00000569615	NUCB2	P80303	420 aa		13.71	□□□□□ -0.21
UTP4-215	ENST00000569615	MYL7	Q01449	175 aa		13.71	□□□□□ -0.21
UTP4-215	ENST00000569615	EHHADH	Q08426	723 aa		13.71	□□□□□ -0.21
UTP4-215	ENST00000569615	DUSP4	Q13115	394 aa		13.71	□□□□□ -0.21
UTP4-215	ENST00000569615	TAF12	Q16514	161 aa		13.71	□□□□□ -0.21
UTP4-215	ENST00000569615	SNRNP35	Q16560	246 aa	Known RBP	13.71	□□□□□ -0.21
UTP4-215	ENST00000569615	NFE2	Q16621	373 aa	Predicted RBP	13.71	□□□□□ -0.21
UTP4-215	ENST00000569615	KNOP1	Q1ED39	458 aa	Known RBP	13.71	□□□□□ -0.21
UTP4-215	ENST00000569615	BMT2	Q1RMZ1	405 aa		13.71	□□□□□ -0.21
UTP4-215	ENST00000569615	CENPP	Q6IPU0	288 aa		13.71	□□□□□ -0.21
UTP4-215	ENST00000569615	WDR49	Q8IV35	697 aa		13.71	□□□□□ -0.21
UTP4-215	ENST00000569615	XXYLT1	Q8NBI6	393 aa		13.71	□□□□□ -0.21
UTP4-215	ENST00000569615	FLCN	Q8NFG4	579 aa		13.71	□□□□□ -0.21
UTP4-215	ENST00000569615	SPPL2B	Q8TCT7	592 aa		13.71	□□□□□ -0.21
UTP4-215	ENST00000569615	RSAD2	Q8WXG1	361 aa		13.71	□□□□□ -0.21
UTP4-215	ENST00000569615	PGLYRP2	Q96PD5	576 aa		13.71	□□□□□ -0.21
UTP4-215	ENST00000569615	FGFBP2	Q9BYJ0	223 aa		13.71	□□□□□ -0.21
UTP4-215	ENST00000569615	BLZF1	Q9H2G9	400 aa		13.71	□□□□□ -0.21
UTP4-215	ENST00000569615	PDE11A	Q9HCR9	933 aa		13.71	□□□□□ -0.21
UTP4-215	ENST00000569615	AGPAT3	Q9NRZ7	376 aa		13.71	□□□□□ -0.21
UTP4-215	ENST00000569615	SERTAD1	Q9UHV2	236 aa		13.71	□□□□□ -0.21
UTP4-215	ENST00000569615	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.7	□□□□□ -0.22
UTP4-215	ENST00000569615		A0A1W2PQ27	194 aa		13.7	□□□□□ -0.22
UTP4-215	ENST00000569615		A0A1W2PQ64	194 aa		13.7	□□□□□ -0.22
UTP4-215	ENST00000569615		A0A1W2PQD8	194 aa		13.7	□□□□□ -0.22
UTP4-215	ENST00000569615	MTMR11	A4FU01	709 aa		13.7	□□□□□ -0.22
UTP4-215	ENST00000569615	GOLGA6L4	A6NEF3	574 aa		13.7	□□□□□ -0.22
UTP4-215	ENST00000569615	ECI2	O75521	394 aa		13.7	□□□□□ -0.22
UTP4-215	ENST00000569615	CFH	P08603	1231 aa		13.7	□□□□□ -0.22
UTP4-215	ENST00000569615	PFKFB1	P16118	471 aa		13.7	□□□□□ -0.22
UTP4-215	ENST00000569615	PCSK1	P29120	753 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 220.9 ms