RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 CYP11A1P05108 521 aa14.9□□□□□ -0.02
HERPUD1-218ENST00000569569 KRT19P08727 400 aa14.9□□□□□ -0.02
HERPUD1-218ENST00000569569 ATF2P15336 505 aa14.9□□□□□ -0.02
HERPUD1-218ENST00000569569 ELF1P32519 619 aa14.9□□□□□ -0.02
HERPUD1-218ENST00000569569 RBP5P82980 135 aa14.9□□□□□ -0.02
HERPUD1-218ENST00000569569 MYBPC2Q14324 1141 aa14.9□□□□□ -0.02
HERPUD1-218ENST00000569569 PSMD6Q15008 389 aa14.9□□□□□ -0.02
HERPUD1-218ENST00000569569 LMBRD2Q68DH5 695 aaPredicted RBP14.9□□□□□ -0.02
HERPUD1-218ENST00000569569 RNF135Q8IUD6 432 aa14.9□□□□□ -0.02
HERPUD1-218ENST00000569569 WDR49Q8IV35 697 aa14.9□□□□□ -0.02
HERPUD1-218ENST00000569569 GUF1Q8N442 669 aaKnown RBP14.9□□□□□ -0.02
HERPUD1-218ENST00000569569 LRRC52Q8N7C0 313 aa14.9□□□□□ -0.02
HERPUD1-218ENST00000569569 CXorf38Q8TB03 319 aa14.9□□□□□ -0.02
HERPUD1-218ENST00000569569 SLC7A14Q8TBB6 771 aa14.9□□□□□ -0.02
HERPUD1-218ENST00000569569 KHSRPQ92945 711 aaKnown RBP eCLIP14.9□□□□□ -0.024e-11■■□□□ 13.6
HERPUD1-218ENST00000569569 GSDMAQ96QA5 445 aa14.9□□□□□ -0.02
HERPUD1-218ENST00000569569 WDR6Q9NNW5 1121 aaKnown RBP14.9□□□□□ -0.02
HERPUD1-218ENST00000569569 TSHZ2Q9NRE2 1034 aa14.9□□□□□ -0.02
HERPUD1-218ENST00000569569 RMND1Q9NWS8 449 aa14.9□□□□□ -0.02
HERPUD1-218ENST00000569569 MAFFQ9ULX9 164 aa14.9□□□□□ -0.02
HERPUD1-218ENST00000569569 TRAF3IP3Q9Y228 551 aa14.9□□□□□ -0.02
HERPUD1-218ENST00000569569 R3HCC1Q9Y3T6 440 aaKnown RBP14.9□□□□□ -0.02
HERPUD1-218ENST00000569569 OR6C75A6NL08 312 aa14.89□□□□□ -0.03
HERPUD1-218ENST00000569569 PI4K2BG5E9Z4 385 aa14.89□□□□□ -0.03
HERPUD1-218ENST00000569569 GADD45BO75293 160 aaPredicted RBP14.89□□□□□ -0.03
HERPUD1-218ENST00000569569 SMC2O95347 1197 aa14.89□□□□□ -0.03
HERPUD1-218ENST00000569569 DLATP10515 647 aaKnown RBP14.89□□□□□ -0.03
HERPUD1-218ENST00000569569 ALADP13716 330 aa14.89□□□□□ -0.03
HERPUD1-218ENST00000569569 TNNI1P19237 187 aa14.89□□□□□ -0.03
HERPUD1-218ENST00000569569 SP100P23497 879 aaPredicted RBP14.89□□□□□ -0.03
HERPUD1-218ENST00000569569 METTL23Q86XA0 190 aa14.89□□□□□ -0.03
HERPUD1-218ENST00000569569 PLCD3Q8N3E9 789 aa14.89□□□□□ -0.03
HERPUD1-218ENST00000569569 OR5B17Q8NGF7 314 aa14.89□□□□□ -0.03
HERPUD1-218ENST00000569569 CCDC127Q96BQ5 260 aa14.89□□□□□ -0.03
HERPUD1-218ENST00000569569 ACSF2Q96CM8 615 aaPredicted RBP14.89□□□□□ -0.03
HERPUD1-218ENST00000569569 CGRRF1Q99675 332 aa14.89□□□□□ -0.03
HERPUD1-218ENST00000569569 AFF4Q9UHB7 1163 aaKnown RBP14.89□□□□□ -0.03
HERPUD1-218ENST00000569569 SIX4Q9UIU6 781 aa14.89□□□□□ -0.03
HERPUD1-218ENST00000569569 MAPK8IP1Q9UQF2 711 aa14.89□□□□□ -0.03
HERPUD1-218ENST00000569569 PTPRJQ12913 1337 aa14.89□□□□□ -0.03
HERPUD1-218ENST00000569569 C2CD4DB7Z1M9 353 aa14.88□□□□□ -0.03
HERPUD1-218ENST00000569569 KINO60870 393 aaKnown RBP14.88□□□□□ -0.03
HERPUD1-218ENST00000569569 XYLBO75191 536 aa14.88□□□□□ -0.03
HERPUD1-218ENST00000569569 NR3C1P04150 777 aa14.88□□□□□ -0.03
HERPUD1-218ENST00000569569 POU2F2P09086 479 aa14.88□□□□□ -0.03
HERPUD1-218ENST00000569569 CPB1P15086 417 aa14.88□□□□□ -0.03
HERPUD1-218ENST00000569569 ADCY1Q08828 1119 aa14.88□□□□□ -0.03
HERPUD1-218ENST00000569569 MYO1EQ12965 1108 aa14.88□□□□□ -0.03
HERPUD1-218ENST00000569569 GPR17Q13304 367 aa14.88□□□□□ -0.03
HERPUD1-218ENST00000569569 NFIL3Q16649 462 aa14.88□□□□□ -0.03
HERPUD1-218ENST00000569569 OTOP3Q7RTS5 596 aa14.88□□□□□ -0.03
HERPUD1-218ENST00000569569 TRAPPC11Q7Z392 1133 aa14.88□□□□□ -0.03
HERPUD1-218ENST00000569569 TCEAL8Q8IYN2 117 aa14.88□□□□□ -0.03
HERPUD1-218ENST00000569569 THEM5Q8N1Q8 247 aa14.88□□□□□ -0.03
HERPUD1-218ENST00000569569 SPATA20Q8TB22 786 aa14.88□□□□□ -0.03
HERPUD1-218ENST00000569569 SMARCE1Q969G3 411 aa14.88□□□□□ -0.03
HERPUD1-218ENST00000569569 FAM84AQ96KN4 292 aa14.88□□□□□ -0.03
HERPUD1-218ENST00000569569 GTPBP4Q9BZE4 634 aaKnown RBP14.88□□□□□ -0.03
HERPUD1-218ENST00000569569 EPHX3Q9H6B9 360 aa14.88□□□□□ -0.03
HERPUD1-218ENST00000569569 CYP4F11Q9HBI6 524 aa14.88□□□□□ -0.03
HERPUD1-218ENST00000569569 PCDHA5Q9Y5H7 936 aa14.88□□□□□ -0.03
HERPUD1-218ENST00000569569 CLUHO75153 1309 aa14.88□□□□□ -0.03
HERPUD1-218ENST00000569569 PRRG1O14668 218 aa14.87□□□□□ -0.03
HERPUD1-218ENST00000569569 CCL16O15467 120 aa14.87□□□□□ -0.03
HERPUD1-218ENST00000569569 DCXO43602 365 aa14.87□□□□□ -0.03
HERPUD1-218ENST00000569569 SEC24AO95486 1093 aa14.87□□□□□ -0.03
HERPUD1-218ENST00000569569 BFSP1Q12934 665 aa14.87□□□□□ -0.03
HERPUD1-218ENST00000569569 ZNF658Q5TYW1 1059 aaPredicted RBP14.87□□□□□ -0.03
HERPUD1-218ENST00000569569 WSCD1Q658N2 575 aa14.87□□□□□ -0.03
HERPUD1-218ENST00000569569 SCARA3Q6AZY7 606 aa14.87□□□□□ -0.03
HERPUD1-218ENST00000569569 RNF19BQ6ZMZ0 732 aa14.87□□□□□ -0.03
HERPUD1-218ENST00000569569 ZDHHC14Q8IZN3 488 aa14.87□□□□□ -0.03
HERPUD1-218ENST00000569569 TDRD5Q8NAT2 981 aaKnown RBP14.87□□□□□ -0.03
HERPUD1-218ENST00000569569 PARD3BQ8TEW8 1205 aa14.87□□□□□ -0.03
HERPUD1-218ENST00000569569 GDAP2Q9NXN4 497 aa14.87□□□□□ -0.03
HERPUD1-218ENST00000569569 POLIQ9UNA4 740 aa14.87□□□□□ -0.03
HERPUD1-218ENST00000569569 FRMD4BQ9Y2L6 1034 aa14.87□□□□□ -0.03
HERPUD1-218ENST00000569569 HUS1O60921 280 aa14.86□□□□□ -0.03
HERPUD1-218ENST00000569569 CST3P01034 146 aaPredicted RBP14.86□□□□□ -0.03
HERPUD1-218ENST00000569569 LRG1P02750 347 aa14.86□□□□□ -0.03
HERPUD1-218ENST00000569569 OR4Q2P0C623 313 aa14.86□□□□□ -0.03
HERPUD1-218ENST00000569569 NR2F2P24468 414 aa14.86□□□□□ -0.03
HERPUD1-218ENST00000569569 RPL13P26373 211 aaKnown RBP14.86□□□□□ -0.03
HERPUD1-218ENST00000569569 CASP4P49662 377 aa14.86□□□□□ -0.03
HERPUD1-218ENST00000569569 AP3M2P53677 418 aa14.86□□□□□ -0.03
HERPUD1-218ENST00000569569 UBE2HP62256 183 aa14.86□□□□□ -0.03
HERPUD1-218ENST00000569569 COBLL1Q53SF7 1204 aa14.86□□□□□ -0.03
HERPUD1-218ENST00000569569 CEP135Q66GS9 1140 aa14.86□□□□□ -0.03
HERPUD1-218ENST00000569569 DPH6Q7L8W6 267 aa14.86□□□□□ -0.03
HERPUD1-218ENST00000569569 GRASPQ7Z6J2 395 aaPredicted RBP14.86□□□□□ -0.03
HERPUD1-218ENST00000569569 SMYD4Q8IYR2 804 aaPredicted RBP14.86□□□□□ -0.03
HERPUD1-218ENST00000569569 TMEM86AQ8N2M4 240 aa14.86□□□□□ -0.03
HERPUD1-218ENST00000569569 ZNF516Q92618 1163 aa14.86□□□□□ -0.03
HERPUD1-218ENST00000569569 ERCC4Q92889 916 aaPredicted RBP14.86□□□□□ -0.03
HERPUD1-218ENST00000569569 HPDLQ96IR7 371 aa14.86□□□□□ -0.03
HERPUD1-218ENST00000569569 C1QTNF1Q9BXJ1 281 aa14.86□□□□□ -0.03
HERPUD1-218ENST00000569569 GZF1Q9H116 711 aaPredicted RBP14.86□□□□□ -0.03
HERPUD1-218ENST00000569569 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.86□□□□□ -0.03
HERPUD1-218ENST00000569569 MUTYHQ9UIF7 546 aa14.86□□□□□ -0.03
HERPUD1-218ENST00000569569 SNX9Q9Y5X1 595 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms