RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 PDCL3Q9H2J4 239 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 AGO3Q9H9G7 860 aaKnown RBP8.17□□□□□ -1.1
CDH13-214ENST00000569455 CYP3A43Q9HB55 503 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 SLC38A7Q9NVC3 462 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 NXF1Q9UBU9 619 aaKnown RBP8.17□□□□□ -1.1
CDH13-214ENST00000569455 SIX4Q9UIU6 781 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 NOCTQ9UK39 431 aaKnown RBP8.17□□□□□ -1.1
CDH13-214ENST00000569455 PADI3Q9ULW8 664 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 NENFQ9UMX5 172 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 AGAP1Q9UPQ3 857 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 CNTN6Q9UQ52 1028 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 HES2Q9Y543 173 aa8.17□□□□□ -1.1
CDH13-214ENST00000569455 TDRD15B5MCY1 1934 aaKnown RBP8.17□□□□□ -1.1
CDH13-214ENST00000569455 SMIM28A0A1B0GU29 152 aa8.16□□□□□ -1.1
CDH13-214ENST00000569455 MACROD2A1Z1Q3 448 aa8.16□□□□□ -1.1
CDH13-214ENST00000569455 CTAGE9A4FU28 777 aa8.16□□□□□ -1.1
CDH13-214ENST00000569455 BTNL10A8MVZ5 291 aa8.16□□□□□ -1.1
CDH13-214ENST00000569455 ZNF623O75123 536 aa8.16□□□□□ -1.1
CDH13-214ENST00000569455 RTN2O75298 545 aa8.16□□□□□ -1.1
CDH13-214ENST00000569455 RAG1P15918 1043 aa8.16□□□□□ -1.1
CDH13-214ENST00000569455 SELPP16109 830 aa8.16□□□□□ -1.1
CDH13-214ENST00000569455 SYN1P17600 705 aa8.16□□□□□ -1.1
CDH13-214ENST00000569455 LAMA2P24043 3122 aaKnown RBP8.16□□□□□ -1.1
CDH13-214ENST00000569455 GNA15P30679 374 aa8.16□□□□□ -1.1
CDH13-214ENST00000569455 SCN1AP35498 2009 aa8.16□□□□□ -1.1
CDH13-214ENST00000569455 PNPLA4P41247 253 aa8.16□□□□□ -1.1
CDH13-214ENST00000569455 ASPAP45381 313 aa8.16□□□□□ -1.1
CDH13-214ENST00000569455 NAP1L1P55209 391 aaKnown RBP8.16□□□□□ -1.1
CDH13-214ENST00000569455 DSC3Q14574 896 aa8.16□□□□□ -1.1
CDH13-214ENST00000569455 ZBTB6Q15916 424 aa8.16□□□□□ -1.1
CDH13-214ENST00000569455 UMODL1Q5DID0 1318 aa8.16□□□□□ -1.1
CDH13-214ENST00000569455 TJAP1Q5JTD0 557 aa8.16□□□□□ -1.1
CDH13-214ENST00000569455 ZNF697Q5TEC3 545 aa8.16□□□□□ -1.1
CDH13-214ENST00000569455 TAF3Q5VWG9 929 aa8.16□□□□□ -1.1
CDH13-214ENST00000569455 LRRC8DQ7L1W4 858 aa8.16□□□□□ -1.1
CDH13-214ENST00000569455 MRPL10Q7Z7H8 261 aaKnown RBP8.16□□□□□ -1.1
CDH13-214ENST00000569455 NOP9Q86U38 636 aaKnown RBP8.16□□□□□ -1.1
CDH13-214ENST00000569455 UBR7Q8N806 425 aa8.16□□□□□ -1.1
CDH13-214ENST00000569455 TRIM58Q8NG06 486 aa8.16□□□□□ -1.1
CDH13-214ENST00000569455 CXorf38Q8TB03 319 aa8.16□□□□□ -1.1
CDH13-214ENST00000569455 SLC20A1Q8WUM9 679 aa8.16□□□□□ -1.1
CDH13-214ENST00000569455 CTNNBL1Q8WYA6 563 aaPredicted RBP8.16□□□□□ -1.1
CDH13-214ENST00000569455 ELMO3Q96BJ8 720 aa8.16□□□□□ -1.1
CDH13-214ENST00000569455 CALR3Q96L12 384 aaKnown RBP8.16□□□□□ -1.1
CDH13-214ENST00000569455 FTHL17Q9BXU8 183 aa8.16□□□□□ -1.1
CDH13-214ENST00000569455 BCO2Q9BYV7 579 aa8.16□□□□□ -1.1
CDH13-214ENST00000569455 HIPK3Q9H422 1215 aa8.16□□□□□ -1.1
CDH13-214ENST00000569455 UBN1Q9NPG3 1134 aa8.16□□□□□ -1.1
CDH13-214ENST00000569455 CISHQ9NSE2 258 aa8.16□□□□□ -1.1
CDH13-214ENST00000569455 KLK14Q9P0G3 267 aa8.16□□□□□ -1.1
CDH13-214ENST00000569455 GIT1Q9Y2X7 761 aa8.16□□□□□ -1.1
CDH13-214ENST00000569455 TANC1Q9C0D5 1861 aa8.15□□□□□ -1.1
CDH13-214ENST00000569455 LTBP2Q14767 1821 aa8.15□□□□□ -1.1
CDH13-214ENST00000569455 A0A0A6YYK5 440 aaPredicted RBP8.15□□□□□ -1.1
CDH13-214ENST00000569455 A0A0U1RQF3 1178 aa8.15□□□□□ -1.1
CDH13-214ENST00000569455 A0A0U1RQJ8 604 aa8.15□□□□□ -1.1
CDH13-214ENST00000569455 ANKRD62A6NC57 917 aa8.15□□□□□ -1.1
CDH13-214ENST00000569455 TRIM43BA6NCK2 446 aa8.15□□□□□ -1.1
CDH13-214ENST00000569455 RCCD1A6NED2 376 aa8.15□□□□□ -1.1
CDH13-214ENST00000569455 TMCO5BA8MYB1 307 aa8.15□□□□□ -1.1
CDH13-214ENST00000569455 THAP12O43422 761 aa8.15□□□□□ -1.1
CDH13-214ENST00000569455 MED7O43513 233 aa8.15□□□□□ -1.1
CDH13-214ENST00000569455 MMEP08473 750 aa8.15□□□□□ -1.1
CDH13-214ENST00000569455 PAEPP09466 180 aa8.15□□□□□ -1.1
CDH13-214ENST00000569455 TMEM253P0C7T8 217 aa8.15□□□□□ -1.1
CDH13-214ENST00000569455 CHRNB2P17787 502 aa8.15□□□□□ -1.1
CDH13-214ENST00000569455 CD58P19256 250 aa8.15□□□□□ -1.1
CDH13-214ENST00000569455 GUCY2FP51841 1108 aa8.15□□□□□ -1.1
CDH13-214ENST00000569455 ZNF132P52740 706 aa8.15□□□□□ -1.1
CDH13-214ENST00000569455 GALCP54803 685 aa8.15□□□□□ -1.1
CDH13-214ENST00000569455 FMO1Q01740 532 aa8.15□□□□□ -1.1
CDH13-214ENST00000569455 PPIGQ13427 754 aaKnown RBP eCLIP8.15□□□□□ -1.1
CDH13-214ENST00000569455 TUBB2AQ13885 445 aa8.15□□□□□ -1.1
CDH13-214ENST00000569455 SV2CQ496J9 727 aa8.15□□□□□ -1.1
CDH13-214ENST00000569455 GLRA4Q5JXX5 417 aa8.15□□□□□ -1.1
CDH13-214ENST00000569455 C9orf57Q5W0N0 161 aa8.15□□□□□ -1.1
CDH13-214ENST00000569455 SCARA5Q6ZMJ2 495 aa8.15□□□□□ -1.1
CDH13-214ENST00000569455 SLC35F6Q8N357 371 aa8.15□□□□□ -1.1
CDH13-214ENST00000569455 ATRIPQ8WXE1 791 aa8.15□□□□□ -1.1
CDH13-214ENST00000569455 TRIM43Q96BQ3 446 aaPredicted RBP8.15□□□□□ -1.1
CDH13-214ENST00000569455 TRIM11Q96F44 468 aa8.15□□□□□ -1.1
CDH13-214ENST00000569455 ZMAT2Q96NC0 199 aaKnown RBP8.15□□□□□ -1.1
CDH13-214ENST00000569455 WDR24Q96S15 920 aa8.15□□□□□ -1.1
CDH13-214ENST00000569455 CDX2Q99626 313 aaPredicted RBP8.15□□□□□ -1.1
CDH13-214ENST00000569455 NAPGQ99747 312 aaPredicted RBP8.15□□□□□ -1.1
CDH13-214ENST00000569455 ADAM2Q99965 735 aa8.15□□□□□ -1.1
CDH13-214ENST00000569455 TUBB2BQ9BVA1 445 aa8.15□□□□□ -1.1
CDH13-214ENST00000569455 IRX2Q9BZI1 471 aaPredicted RBP8.15□□□□□ -1.1
CDH13-214ENST00000569455 RNF39Q9H2S5 420 aa8.15□□□□□ -1.1
CDH13-214ENST00000569455 TRIM10Q9UDY6 481 aa8.15□□□□□ -1.1
CDH13-214ENST00000569455 TUBGCP4Q9UGJ1 667 aa8.15□□□□□ -1.1
CDH13-214ENST00000569455 PUF60Q9UHX1 559 aaKnown RBP8.15□□□□□ -1.1
CDH13-214ENST00000569455 POLIQ9UNA4 740 aa8.15□□□□□ -1.1
CDH13-214ENST00000569455 TFR2Q9UP52 801 aa8.15□□□□□ -1.1
CDH13-214ENST00000569455 CDH23Q9H251 3354 aa8.14□□□□□ -1.11
CDH13-214ENST00000569455 NCANO14594 1321 aa8.14□□□□□ -1.11
CDH13-214ENST00000569455 ANO9A1A5B4 782 aa8.14□□□□□ -1.11
CDH13-214ENST00000569455 PIRO00625 290 aa8.14□□□□□ -1.11
CDH13-214ENST00000569455 EFCAB14O75071 495 aa8.14□□□□□ -1.11
CDH13-214ENST00000569455 URI1O94763 535 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms