RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 ENGASEQ8NFI3 743 aa10.59□□□□□ -0.71
CLN6-209ENST00000569336 ZNF461Q8TAF7 563 aa10.59□□□□□ -0.71
CLN6-209ENST00000569336 SMG7Q92540 1137 aaKnown RBP10.59□□□□□ -0.71
CLN6-209ENST00000569336 SMARCE1Q969G3 411 aa10.59□□□□□ -0.71
CLN6-209ENST00000569336 ACSF2Q96CM8 615 aaPredicted RBP10.59□□□□□ -0.71
CLN6-209ENST00000569336 SENP8Q96LD8 212 aa10.59□□□□□ -0.71
CLN6-209ENST00000569336 CGRRF1Q99675 332 aa10.59□□□□□ -0.71
CLN6-209ENST00000569336 MTMR12Q9C0I1 747 aa10.59□□□□□ -0.71
CLN6-209ENST00000569336 KCTD10Q9H3F6 313 aa10.59□□□□□ -0.71
CLN6-209ENST00000569336 POMKQ9H5K3 350 aa10.59□□□□□ -0.71
CLN6-209ENST00000569336 PIDD1Q9HB75 910 aa10.59□□□□□ -0.71
CLN6-209ENST00000569336 TSHZ2Q9NRE2 1034 aa10.59□□□□□ -0.71
CLN6-209ENST00000569336 INTS13Q9NVM9 706 aa10.59□□□□□ -0.71
CLN6-209ENST00000569336 FBXL5Q9UKA1 691 aa10.59□□□□□ -0.71
CLN6-209ENST00000569336 MAFFQ9ULX9 164 aa10.59□□□□□ -0.71
CLN6-209ENST00000569336 USTQ9Y2C2 406 aa10.59□□□□□ -0.71
CLN6-209ENST00000569336 FRMD4BQ9Y2L6 1034 aa10.59□□□□□ -0.71
CLN6-209ENST00000569336 ZDBF2Q9HCK1 2354 aa10.59□□□□□ -0.71
CLN6-209ENST00000569336 CLUHO75153 1309 aa10.58□□□□□ -0.71
CLN6-209ENST00000569336 KPNA7A9QM74 516 aa10.58□□□□□ -0.72
CLN6-209ENST00000569336 LOC730098B7Z3J9 87 aa10.58□□□□□ -0.72
CLN6-209ENST00000569336 PPEF2O14830 753 aa10.58□□□□□ -0.72
CLN6-209ENST00000569336 GPR37L1O60883 481 aa10.58□□□□□ -0.72
CLN6-209ENST00000569336 NR3C1P04150 777 aa10.58□□□□□ -0.72
CLN6-209ENST00000569336 CYP11A1P05108 521 aa10.58□□□□□ -0.72
CLN6-209ENST00000569336 KRT19P08727 400 aa10.58□□□□□ -0.72
CLN6-209ENST00000569336 POU2F2P09086 479 aa10.58□□□□□ -0.72
CLN6-209ENST00000569336 SPATA31D3P0C874 917 aa10.58□□□□□ -0.72
CLN6-209ENST00000569336 DLATP10515 647 aaKnown RBP10.58□□□□□ -0.72
CLN6-209ENST00000569336 ATF2P15336 505 aa10.58□□□□□ -0.72
CLN6-209ENST00000569336 TNNI1P19237 187 aa10.58□□□□□ -0.72
CLN6-209ENST00000569336 RPL13P26373 211 aaKnown RBP10.58□□□□□ -0.72
CLN6-209ENST00000569336 POLR2BP30876 1174 aaKnown RBP10.58□□□□□ -0.72
CLN6-209ENST00000569336 PPP1R2P41236 205 aa10.58□□□□□ -0.72
CLN6-209ENST00000569336 AP3M2P53677 418 aa10.58□□□□□ -0.72
CLN6-209ENST00000569336 UBE2HP62256 183 aa10.58□□□□□ -0.72
CLN6-209ENST00000569336 RBP5P82980 135 aa10.58□□□□□ -0.72
CLN6-209ENST00000569336 STIM1Q13586 685 aa10.58□□□□□ -0.72
CLN6-209ENST00000569336 NFIL3Q16649 462 aa10.58□□□□□ -0.72
CLN6-209ENST00000569336 ZNF658Q5TYW1 1059 aaPredicted RBP10.58□□□□□ -0.72
CLN6-209ENST00000569336 SPATA31D4Q6ZUB0 917 aa10.58□□□□□ -0.72
CLN6-209ENST00000569336 CSGALNACT2Q8N6G5 542 aa10.58□□□□□ -0.72
CLN6-209ENST00000569336 C1orf127Q8N9H9 656 aa10.58□□□□□ -0.72
CLN6-209ENST00000569336 SLC7A14Q8TBB6 771 aa10.58□□□□□ -0.72
CLN6-209ENST00000569336 SPATA18Q8TC71 538 aa10.58□□□□□ -0.72
CLN6-209ENST00000569336 RPGRIP1Q96KN7 1286 aa10.58□□□□□ -0.72
CLN6-209ENST00000569336 PRKD2Q9BZL6 878 aa10.58□□□□□ -0.72
CLN6-209ENST00000569336 TRAF3IP3Q9Y228 551 aa10.58□□□□□ -0.72
CLN6-209ENST00000569336 WDR27A2RRH5 827 aa10.57□□□□□ -0.72
CLN6-209ENST00000569336 CYB561D2O14569 222 aa10.57□□□□□ -0.72
CLN6-209ENST00000569336 MAPK13O15264 365 aa10.57□□□□□ -0.72
CLN6-209ENST00000569336 ADAM12O43184 909 aa10.57□□□□□ -0.72
CLN6-209ENST00000569336 TBC1D4O60343 1298 aa10.57□□□□□ -0.72
CLN6-209ENST00000569336 HUS1O60921 280 aa10.57□□□□□ -0.72
CLN6-209ENST00000569336 RFPL2O75678 378 aa10.57□□□□□ -0.72
CLN6-209ENST00000569336 ABLIM3O94929 683 aa10.57□□□□□ -0.72
CLN6-209ENST00000569336 LRG1P02750 347 aa10.57□□□□□ -0.72
CLN6-209ENST00000569336 ALADP13716 330 aa10.57□□□□□ -0.72
CLN6-209ENST00000569336 NR2F2P24468 414 aa10.57□□□□□ -0.72
CLN6-209ENST00000569336 IGFBP6P24592 240 aaPredicted RBP10.57□□□□□ -0.72
CLN6-209ENST00000569336 ARPP19P56211 112 aa10.57□□□□□ -0.72
CLN6-209ENST00000569336 WNT7BP56706 349 aa10.57□□□□□ -0.72
CLN6-209ENST00000569336 BFSP1Q12934 665 aa10.57□□□□□ -0.72
CLN6-209ENST00000569336 PLD1Q13393 1074 aa10.57□□□□□ -0.72
CLN6-209ENST00000569336 COBLL1Q53SF7 1204 aa10.57□□□□□ -0.72
CLN6-209ENST00000569336 OTOP3Q7RTS5 596 aa10.57□□□□□ -0.72
CLN6-209ENST00000569336 TCEAL8Q8IYN2 117 aa10.57□□□□□ -0.72
CLN6-209ENST00000569336 THEM5Q8N1Q8 247 aa10.57□□□□□ -0.72
CLN6-209ENST00000569336 TMEM86AQ8N2M4 240 aa10.57□□□□□ -0.72
CLN6-209ENST00000569336 ELMOD1Q8N336 334 aa10.57□□□□□ -0.72
CLN6-209ENST00000569336 PLCD3Q8N3E9 789 aa10.57□□□□□ -0.72
CLN6-209ENST00000569336 RDH13Q8NBN7 331 aa10.57□□□□□ -0.72
CLN6-209ENST00000569336 CCDC127Q96BQ5 260 aa10.57□□□□□ -0.72
CLN6-209ENST00000569336 TSG101Q99816 390 aa10.57□□□□□ -0.72
CLN6-209ENST00000569336 WDR6Q9NNW5 1121 aaKnown RBP10.57□□□□□ -0.72
CLN6-209ENST00000569336 AFF4Q9UHB7 1163 aaKnown RBP10.57□□□□□ -0.72
CLN6-209ENST00000569336 AGAP1Q9UPQ3 857 aa10.57□□□□□ -0.72
CLN6-209ENST00000569336 PTPRJQ12913 1337 aa10.57□□□□□ -0.72
CLN6-209ENST00000569336 PSMA7O14818 248 aa10.56□□□□□ -0.72
CLN6-209ENST00000569336 SPTLC1O15269 473 aa10.56□□□□□ -0.72
CLN6-209ENST00000569336 WEE2P0C1S8 567 aa10.56□□□□□ -0.72
CLN6-209ENST00000569336 TSPY1Q01534 308 aa10.56□□□□□ -0.72
CLN6-209ENST00000569336 ENPEPQ07075 957 aa10.56□□□□□ -0.72
CLN6-209ENST00000569336 SMARCB1Q12824 385 aa10.56□□□□□ -0.72
CLN6-209ENST00000569336 GPR17Q13304 367 aa10.56□□□□□ -0.72
CLN6-209ENST00000569336 EDRF1Q3B7T1 1238 aa10.56□□□□□ -0.72
CLN6-209ENST00000569336 CEP135Q66GS9 1140 aa10.56□□□□□ -0.72
CLN6-209ENST00000569336 LMBRD2Q68DH5 695 aaPredicted RBP10.56□□□□□ -0.72
CLN6-209ENST00000569336 RSPO2Q6UXX9 243 aaPredicted RBP10.56□□□□□ -0.72
CLN6-209ENST00000569336 INTS8Q75QN2 995 aaKnown RBP10.56□□□□□ -0.72
CLN6-209ENST00000569336 TOP6BLQ8N6T0 577 aa10.56□□□□□ -0.72
CLN6-209ENST00000569336 OR5B17Q8NGF7 314 aa10.56□□□□□ -0.72
CLN6-209ENST00000569336 SPATA20Q8TB22 786 aa10.56□□□□□ -0.72
CLN6-209ENST00000569336 C2orf15Q8WU43 125 aaKnown RBP10.56□□□□□ -0.72
CLN6-209ENST00000569336 ZNF707Q96C28 371 aaPredicted RBP10.56□□□□□ -0.72
CLN6-209ENST00000569336 HPDLQ96IR7 371 aa10.56□□□□□ -0.72
CLN6-209ENST00000569336 MFSD14AQ96MC6 490 aa10.56□□□□□ -0.72
CLN6-209ENST00000569336 GBP4Q96PP9 640 aa10.56□□□□□ -0.72
CLN6-209ENST00000569336 CYP4F11Q9HBI6 524 aa10.56□□□□□ -0.72
CLN6-209ENST00000569336 DMAC2Q9NW81 257 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms