RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 AASDHPPTQ9NRN7 309 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 GDAQ9Y2T3 454 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 NCKAP5LQ9HCH0 1330 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 PCNAP12004 261 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 MYL6P60660 151 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 MEI1Q5TIA1 1274 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 FAM45BPQ6NSW5 357 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 TMC3Q7Z5M5 1100 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 SMYD4Q8IYR2 804 aaPredicted RBP7.43□□□□□ -1.22
CNOT1-216ENST00000569240 XXYLT1Q8NBI6 393 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 MYL10Q9BUA6 226 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 ADCY6O43306 1168 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 PIGHQ14442 188 aaPredicted RBP7.43□□□□□ -1.22
CNOT1-216ENST00000569240 TMCO4Q5TGY1 634 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 SHQ1Q6PI26 577 aaKnown RBP7.43□□□□□ -1.22
CNOT1-216ENST00000569240 TAS2R42Q7RTR8 314 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 ERICH1Q86X53 443 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 TSPAN14Q8NG11 270 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 OR6Y1Q8NGX8 325 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 ECSITQ9BQ95 431 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 FANCAO15360 1455 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 ATP10BO94823 1461 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 MAGEC1O60732 1142 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 FGFR4P22455 802 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 ATP6V1E1P36543 226 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 GP5P40197 560 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 STAT5AP42229 794 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 STAT5BP51692 787 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 KCNMA1Q12791 1236 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 C6orf10Q5SRN2 563 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 AKAP14Q86UN6 197 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 CATSPER3Q86XQ3 398 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 SLC13A5Q86YT5 568 aaPredicted RBP7.43□□□□□ -1.22
CNOT1-216ENST00000569240 TINF2Q9BSI4 451 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 RAPGEFL1Q9UHV5 662 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 ERVK-7P63135 1459 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 LRRC10BA6NIK2 292 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 NCK2O43639 380 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 UQCRBP14927 111 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 DRD4P21917 467 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 HOXC9P31274 260 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 CTDSPL2Q05D32 466 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 PTK7Q13308 1070 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 MEA1Q16626 185 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 BSPRYQ5W0U4 402 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 RINLQ6ZS11 566 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 UBE2Q1Q7Z7E8 422 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 GIPC3Q8TF64 312 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 HSPH1Q92598 858 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 EBF2Q9HAK2 575 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 DENND4BO75064 1496 aaPredicted RBP7.43□□□□□ -1.22
CNOT1-216ENST00000569240 C2CD2LO14523 706 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 NPR1P16066 1061 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 DNAJB2P25686 324 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 PRIM2P49643 509 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 CCNHP51946 323 aaPredicted RBP7.43□□□□□ -1.22
CNOT1-216ENST00000569240 COPZ1P61923 177 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 BICRALQ6AI39 1079 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 TPTE2Q6XPS3 522 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 SRBD1Q8N5C6 995 aaKnown RBP7.43□□□□□ -1.22
CNOT1-216ENST00000569240 RORBQ92753 470 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 PCDH18Q9HCL0 1135 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 SORBS3O60504 671 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 ZC3H11AO75152 810 aaKnown RBP eCLIP7.43□□□□□ -1.22
CNOT1-216ENST00000569240 ADCY1Q08828 1119 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 CENPPQ6IPU0 288 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 EXOC3L1Q86VI1 746 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 CLVS1Q8IUQ0 354 aaPredicted RBP7.43□□□□□ -1.22
CNOT1-216ENST00000569240 C19orf18Q8NEA5 215 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 MRPL48Q96GC5 212 aaKnown RBP7.43□□□□□ -1.22
CNOT1-216ENST00000569240 CACNA2D2Q9NY47 1150 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 STK39Q9UEW8 545 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 IPPQ9Y573 584 aa7.43□□□□□ -1.22
CNOT1-216ENST00000569240 FAM237AA0A1B0GTK4 181 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 FTLP02792 175 aaPredicted RBP7.42□□□□□ -1.22
CNOT1-216ENST00000569240 POLR2MP0CAP2 368 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 HOXC8P31273 242 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 TALDO1P37837 337 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 CHRNB3Q05901 458 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 NR5A1Q13285 461 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 MTA1Q13330 715 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 PDK3Q15120 406 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 SAMD4BQ5PRF9 694 aaKnown RBP7.42□□□□□ -1.22
CNOT1-216ENST00000569240 BROXQ5VW32 411 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 ZNF589Q86UQ0 364 aaPredicted RBP7.42□□□□□ -1.22
CNOT1-216ENST00000569240 SLC30A5Q8TAD4 765 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 BLOC1S5Q8TDH9 187 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 YTHDF1Q9BYJ9 559 aaKnown RBP7.42□□□□□ -1.22
CNOT1-216ENST00000569240 OSBPL6Q9BZF3 934 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 GTSE1Q9NYZ3 720 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 ING4Q9UNL4 249 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 PIK3CDO00329 1044 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 ME2P23368 584 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 SP100P23497 879 aaPredicted RBP7.42□□□□□ -1.22
CNOT1-216ENST00000569240 ARSEP51690 589 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 KYAT1Q16773 422 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 ZC2HC1CQ53FD0 456 aaPredicted RBP7.42□□□□□ -1.22
CNOT1-216ENST00000569240 MICALL2Q8IY33 904 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 PTPRN2Q92932 1015 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 CHP1Q99653 195 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms