RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 PAX3P23760 479 aa9.48□□□□□ -0.89
SMG1-216ENST00000569122 DDX6P26196 483 aaKnown RBP eCLIP9.48□□□□□ -0.89
SMG1-216ENST00000569122 PDIA3P30101 505 aaKnown RBP9.48□□□□□ -0.89
SMG1-216ENST00000569122 HOXD12P35452 270 aa9.48□□□□□ -0.89
SMG1-216ENST00000569122 GRM5P41594 1212 aa9.48□□□□□ -0.89
SMG1-216ENST00000569122 TUFMP49411 452 aaKnown RBP9.48□□□□□ -0.89
SMG1-216ENST00000569122 EVCP57679 992 aa9.48□□□□□ -0.89
SMG1-216ENST00000569122 IRX4P78413 519 aa9.48□□□□□ -0.89
SMG1-216ENST00000569122 TNK2Q07912 1038 aa9.48□□□□□ -0.89
SMG1-216ENST00000569122 GPR17Q13304 367 aa9.48□□□□□ -0.89
SMG1-216ENST00000569122 BYSLQ13895 437 aaKnown RBP9.48□□□□□ -0.89
SMG1-216ENST00000569122 DMC1Q14565 340 aa9.48□□□□□ -0.89
SMG1-216ENST00000569122 VEPH1Q14D04 833 aa9.48□□□□□ -0.89
SMG1-216ENST00000569122 PDGFRLQ15198 375 aa9.48□□□□□ -0.89
SMG1-216ENST00000569122 TAF12Q16514 161 aa9.48□□□□□ -0.89
SMG1-216ENST00000569122 SPDYCQ5MJ68 293 aa9.48□□□□□ -0.89
SMG1-216ENST00000569122 FSTL4Q6MZW2 842 aa9.48□□□□□ -0.89
SMG1-216ENST00000569122 KIAA1211LQ6NV74 962 aa9.48□□□□□ -0.89
SMG1-216ENST00000569122 ARMCX5Q6P1M9 558 aa9.48□□□□□ -0.89
SMG1-216ENST00000569122 ALKAL1Q6UXT8 129 aa9.48□□□□□ -0.89
SMG1-216ENST00000569122 RNF19BQ6ZMZ0 732 aa9.48□□□□□ -0.89
SMG1-216ENST00000569122 MAEAQ7L5Y9 396 aa9.48□□□□□ -0.89
SMG1-216ENST00000569122 TMC8Q8IU68 726 aa9.48□□□□□ -0.89
SMG1-216ENST00000569122 RASEFQ8IZ41 740 aa9.48□□□□□ -0.89
SMG1-216ENST00000569122 PIGOQ8TEQ8 1089 aa9.48□□□□□ -0.89
SMG1-216ENST00000569122 ACAP3Q96P50 834 aa9.48□□□□□ -0.89
SMG1-216ENST00000569122 P2RY13Q9BPV8 354 aa9.48□□□□□ -0.89
SMG1-216ENST00000569122 LRRC3Q9BY71 257 aa9.48□□□□□ -0.89
SMG1-216ENST00000569122 AGXT2Q9BYV1 514 aa9.48□□□□□ -0.89
SMG1-216ENST00000569122 KIF9Q9HAQ2 790 aa9.48□□□□□ -0.89
SMG1-216ENST00000569122 GOLGA2P5Q9HBQ8 144 aa9.48□□□□□ -0.89
SMG1-216ENST00000569122 TNFSF13BQ9Y275 285 aa9.48□□□□□ -0.89
SMG1-216ENST00000569122 K7ERI5 159 aa9.47□□□□□ -0.89
SMG1-216ENST00000569122 TNFRSF10BO14763 440 aa9.47□□□□□ -0.89
SMG1-216ENST00000569122 MEFVO15553 781 aaPredicted RBP9.47□□□□□ -0.89
SMG1-216ENST00000569122 CDKL5O76039 1030 aa9.47□□□□□ -0.89
SMG1-216ENST00000569122 GABRR2P28476 465 aa9.47□□□□□ -0.89
SMG1-216ENST00000569122 AVPR1AP37288 418 aa9.47□□□□□ -0.89
SMG1-216ENST00000569122 CCT2P78371 535 aaKnown RBP9.47□□□□□ -0.89
SMG1-216ENST00000569122 BFSP1Q12934 665 aa9.47□□□□□ -0.89
SMG1-216ENST00000569122 DUSP4Q13115 394 aa9.47□□□□□ -0.89
SMG1-216ENST00000569122 NR1H3Q13133 447 aa9.47□□□□□ -0.89
SMG1-216ENST00000569122 MYBPC2Q14324 1141 aa9.47□□□□□ -0.89
SMG1-216ENST00000569122 CALCRLQ16602 461 aa9.47□□□□□ -0.89
SMG1-216ENST00000569122 TRIM61Q5EBN2 209 aa9.47□□□□□ -0.89
SMG1-216ENST00000569122 PKN3Q6P5Z2 889 aa9.47□□□□□ -0.89
SMG1-216ENST00000569122 GAREM2Q75VX8 874 aa9.47□□□□□ -0.89
SMG1-216ENST00000569122 LPCAT2Q7L5N7 544 aa9.47□□□□□ -0.89
SMG1-216ENST00000569122 RABEPKQ7Z6M1 372 aa9.47□□□□□ -0.89
SMG1-216ENST00000569122 GLIS3Q8NEA6 775 aa9.47□□□□□ -0.89
SMG1-216ENST00000569122 TSTD1Q8NFU3 115 aa9.47□□□□□ -0.89
SMG1-216ENST00000569122 RPLP0P6Q8NHW5 317 aa9.47□□□□□ -0.89
SMG1-216ENST00000569122 CEP76Q8TAP6 659 aa9.47□□□□□ -0.89
SMG1-216ENST00000569122 PIGKQ92643 395 aa9.47□□□□□ -0.89
SMG1-216ENST00000569122 KIFAP3Q92845 792 aa9.47□□□□□ -0.89
SMG1-216ENST00000569122 SPACA7Q96KW9 195 aa9.47□□□□□ -0.89
SMG1-216ENST00000569122 JAKMIP1Q96N16 626 aaKnown RBP9.47□□□□□ -0.89
SMG1-216ENST00000569122 TBC1D32Q96NH3 1257 aa9.47□□□□□ -0.89
SMG1-216ENST00000569122 LRRC3BQ96PB8 259 aa9.47□□□□□ -0.89
SMG1-216ENST00000569122 FAM83CQ9BQN1 747 aa9.47□□□□□ -0.89
SMG1-216ENST00000569122 CCDC113Q9H0I3 377 aa9.47□□□□□ -0.89
SMG1-216ENST00000569122 CXCL16Q9H2A7 254 aa9.47□□□□□ -0.89
SMG1-216ENST00000569122 CCDC86Q9H6F5 360 aaKnown RBP9.47□□□□□ -0.89
SMG1-216ENST00000569122 TTC12Q9H892 705 aaPredicted RBP9.47□□□□□ -0.89
SMG1-216ENST00000569122 BRMS1Q9HCU9 246 aa9.47□□□□□ -0.89
SMG1-216ENST00000569122 TUFT1Q9NNX1 390 aa9.47□□□□□ -0.89
SMG1-216ENST00000569122 GPRC5CQ9NQ84 441 aa9.47□□□□□ -0.89
SMG1-216ENST00000569122 KLK13Q9UKR3 277 aa9.47□□□□□ -0.89
SMG1-216ENST00000569122 NCANO14594 1321 aa9.47□□□□□ -0.89
SMG1-216ENST00000569122 DSPP15924 2871 aaKnown RBP9.47□□□□□ -0.89
SMG1-216ENST00000569122 DMXL2Q8TDJ6 3036 aa9.47□□□□□ -0.89
SMG1-216ENST00000569122 SDK1Q7Z5N4 2213 aa9.47□□□□□ -0.89
SMG1-216ENST00000569122 RALGAPA1Q6GYQ0 2036 aa9.46□□□□□ -0.89
SMG1-216ENST00000569122 DOCK6Q96HP0 2047 aa9.46□□□□□ -0.89
SMG1-216ENST00000569122 ARHGEF35A5YM69 484 aa9.46□□□□□ -0.9
SMG1-216ENST00000569122 TTLL13PA6NNM8 815 aa9.46□□□□□ -0.9
SMG1-216ENST00000569122 DCLK1O15075 740 aa9.46□□□□□ -0.9
SMG1-216ENST00000569122 MAP3K13O43283 966 aa9.46□□□□□ -0.9
SMG1-216ENST00000569122 EGFP01133 1207 aa9.46□□□□□ -0.9
SMG1-216ENST00000569122 CYP11B2P19099 503 aa9.46□□□□□ -0.9
SMG1-216ENST00000569122 IGFBP6P24592 240 aaPredicted RBP9.46□□□□□ -0.9
SMG1-216ENST00000569122 DHPSP49366 369 aaPredicted RBP9.46□□□□□ -0.9
SMG1-216ENST00000569122 GALK1P51570 392 aa9.46□□□□□ -0.9
SMG1-216ENST00000569122 C19orf57Q0VDD7 668 aa9.46□□□□□ -0.9
SMG1-216ENST00000569122 SMARCB1Q12824 385 aa9.46□□□□□ -0.9
SMG1-216ENST00000569122 SEMA3BQ13214 749 aa9.46□□□□□ -0.9
SMG1-216ENST00000569122 NPY5RQ15761 445 aa9.46□□□□□ -0.9
SMG1-216ENST00000569122 EEF1DP3Q658K8 133 aa9.46□□□□□ -0.9
SMG1-216ENST00000569122 CENPPQ6IPU0 288 aa9.46□□□□□ -0.9
SMG1-216ENST00000569122 PIK3AP1Q6ZUJ8 805 aa9.46□□□□□ -0.9
SMG1-216ENST00000569122 PIP4P1Q86T03 277 aa9.46□□□□□ -0.9
SMG1-216ENST00000569122 SYT12Q8IV01 421 aa9.46□□□□□ -0.9
SMG1-216ENST00000569122 CMTM8Q8IZV2 173 aa9.46□□□□□ -0.9
SMG1-216ENST00000569122 CPA6Q8N4T0 437 aa9.46□□□□□ -0.9
SMG1-216ENST00000569122 TCHPQ9BT92 498 aa9.46□□□□□ -0.9
SMG1-216ENST00000569122 DNAJC25Q9H1X3 360 aa9.46□□□□□ -0.9
SMG1-216ENST00000569122 NCOA5Q9HCD5 579 aaKnown RBP9.46□□□□□ -0.9
SMG1-216ENST00000569122 SCUBE2Q9NQ36 999 aa9.46□□□□□ -0.9
SMG1-216ENST00000569122 CNTN3Q9P232 1028 aa9.46□□□□□ -0.9
SMG1-216ENST00000569122 GREB1Q4ZG55 1949 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms