RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 PCDHB13Q9Y5F0 798 aa8.47□□□□□ -1.05
CDH3-209ENST00000569080 NCANO14594 1321 aa8.47□□□□□ -1.05
CDH3-209ENST00000569080 WDR87Q6ZQQ6 2873 aa8.47□□□□□ -1.05
CDH3-209ENST00000569080 PATJQ8NI35 1801 aa8.46□□□□□ -1.06
CDH3-209ENST00000569080 MTMR11A4FU01 709 aa8.46□□□□□ -1.06
CDH3-209ENST00000569080 PRRG1O14668 218 aa8.46□□□□□ -1.06
CDH3-209ENST00000569080 EIF3DO15371 548 aaKnown RBP eCLIP8.46□□□□□ -1.06
CDH3-209ENST00000569080 POLR2DO15514 142 aaKnown RBP8.46□□□□□ -1.06
CDH3-209ENST00000569080 TGFB1I1O43294 461 aa8.46□□□□□ -1.06
CDH3-209ENST00000569080 ACTN4O43707 911 aaKnown RBP8.46□□□□□ -1.06
CDH3-209ENST00000569080 EXTL3O43909 919 aa8.46□□□□□ -1.06
CDH3-209ENST00000569080 LRG1P02750 347 aa8.46□□□□□ -1.06
CDH3-209ENST00000569080 HSP90AA1P07900 732 aaKnown RBP8.46□□□□□ -1.06
CDH3-209ENST00000569080 CFHP08603 1231 aa8.46□□□□□ -1.06
CDH3-209ENST00000569080 ODC1P11926 461 aa8.46□□□□□ -1.06
CDH3-209ENST00000569080 CPB1P15086 417 aa8.46□□□□□ -1.06
CDH3-209ENST00000569080 PAX3P23760 479 aa8.46□□□□□ -1.06
CDH3-209ENST00000569080 CLCN5P51795 746 aa8.46□□□□□ -1.06
CDH3-209ENST00000569080 ASIC1P78348 528 aa8.46□□□□□ -1.06
CDH3-209ENST00000569080 TWF1Q12792 350 aa8.46□□□□□ -1.06
CDH3-209ENST00000569080 GPR17Q13304 367 aa8.46□□□□□ -1.06
CDH3-209ENST00000569080 BMT2Q1RMZ1 405 aa8.46□□□□□ -1.06
CDH3-209ENST00000569080 FAM26FQ5R3K3 315 aa8.46□□□□□ -1.06
CDH3-209ENST00000569080 ASTLQ6HA08 431 aaPredicted RBP8.46□□□□□ -1.06
CDH3-209ENST00000569080 OVOS1Q6IE37 1185 aa8.46□□□□□ -1.06
CDH3-209ENST00000569080 UNC13DQ70J99 1090 aa8.46□□□□□ -1.06
CDH3-209ENST00000569080 TMC8Q8IU68 726 aa8.46□□□□□ -1.06
CDH3-209ENST00000569080 SIX5Q8N196 739 aa8.46□□□□□ -1.06
CDH3-209ENST00000569080 SPRYD3Q8NCJ5 442 aa8.46□□□□□ -1.06
CDH3-209ENST00000569080 GPR152Q8TDT2 470 aa8.46□□□□□ -1.06
CDH3-209ENST00000569080 SCFD1Q8WVM8 642 aa8.46□□□□□ -1.06
CDH3-209ENST00000569080 ING5Q8WYH8 240 aa8.46□□□□□ -1.06
CDH3-209ENST00000569080 TCEAL4Q96EI5 215 aa8.46□□□□□ -1.06
CDH3-209ENST00000569080 PGLYRP2Q96PD5 576 aa8.46□□□□□ -1.06
CDH3-209ENST00000569080 PHOX2BQ99453 314 aa8.46□□□□□ -1.06
CDH3-209ENST00000569080 LRRC3Q9BY71 257 aa8.46□□□□□ -1.06
CDH3-209ENST00000569080 OXCT2Q9BYC2 517 aaPredicted RBP8.46□□□□□ -1.06
CDH3-209ENST00000569080 GZF1Q9H116 711 aaPredicted RBP8.46□□□□□ -1.06
CDH3-209ENST00000569080 TMEM206Q9H813 350 aa8.46□□□□□ -1.06
CDH3-209ENST00000569080 DPP3Q9NY33 737 aa8.46□□□□□ -1.06
CDH3-209ENST00000569080 WNT16Q9UBV4 365 aa8.46□□□□□ -1.06
CDH3-209ENST00000569080 SIX4Q9UIU6 781 aa8.46□□□□□ -1.06
CDH3-209ENST00000569080 HPSEQ9Y251 543 aa8.46□□□□□ -1.06
CDH3-209ENST00000569080 OBSL1O75147 1896 aa8.46□□□□□ -1.06
CDH3-209ENST00000569080 NUP210Q8TEM1 1887 aaPredicted RBP8.46□□□□□ -1.06
CDH3-209ENST00000569080 UBE4BO95155 1302 aa8.46□□□□□ -1.06
CDH3-209ENST00000569080 FAM237AA0A1B0GTK4 181 aa8.45□□□□□ -1.06
CDH3-209ENST00000569080 GOLGA8IPA6NC78 632 aa8.45□□□□□ -1.06
CDH3-209ENST00000569080 SHISA7A6NL88 538 aa8.45□□□□□ -1.06
CDH3-209ENST00000569080 GOLGA8JA6NMD2 632 aa8.45□□□□□ -1.06
CDH3-209ENST00000569080 GALR2O43603 387 aaPredicted RBP8.45□□□□□ -1.06
CDH3-209ENST00000569080 PI15O43692 258 aa8.45□□□□□ -1.06
CDH3-209ENST00000569080 KLRC4O43908 158 aa8.45□□□□□ -1.06
CDH3-209ENST00000569080 MICAL2O94851 1124 aa8.45□□□□□ -1.06
CDH3-209ENST00000569080 ITGB3P05106 788 aa8.45□□□□□ -1.06
CDH3-209ENST00000569080 AOC1P19801 751 aa8.45□□□□□ -1.06
CDH3-209ENST00000569080 POLR2BP30876 1174 aaKnown RBP8.45□□□□□ -1.06
CDH3-209ENST00000569080 ELF1P32519 619 aa8.45□□□□□ -1.06
CDH3-209ENST00000569080 ME1P48163 572 aa8.45□□□□□ -1.06
CDH3-209ENST00000569080 TAF6P49848 677 aa8.45□□□□□ -1.06
CDH3-209ENST00000569080 NUBP1P53384 320 aa8.45□□□□□ -1.06
CDH3-209ENST00000569080 PTPN5P54829 565 aa8.45□□□□□ -1.06
CDH3-209ENST00000569080 WSCD1Q658N2 575 aa8.45□□□□□ -1.06
CDH3-209ENST00000569080 CENPPQ6IPU0 288 aa8.45□□□□□ -1.06
CDH3-209ENST00000569080 ARMCX5Q6P1M9 558 aa8.45□□□□□ -1.06
CDH3-209ENST00000569080 DSTYKQ6XUX3 929 aa8.45□□□□□ -1.06
CDH3-209ENST00000569080 MTSS1LQ765P7 747 aa8.45□□□□□ -1.06
CDH3-209ENST00000569080 USP37Q86T82 979 aa8.45□□□□□ -1.06
CDH3-209ENST00000569080 CBWD2Q8IUF1 395 aa8.45□□□□□ -1.06
CDH3-209ENST00000569080 GRAMD1CQ8IYS0 662 aa8.45□□□□□ -1.06
CDH3-209ENST00000569080 HS6ST3Q8IZP7 471 aa8.45□□□□□ -1.06
CDH3-209ENST00000569080 GPD1LQ8N335 351 aa8.45□□□□□ -1.06
CDH3-209ENST00000569080 ATAD1Q8NBU5 361 aa8.45□□□□□ -1.06
CDH3-209ENST00000569080 ZNF507Q8TCN5 953 aa8.45□□□□□ -1.06
CDH3-209ENST00000569080 LEO1Q8WVC0 666 aaPredicted RBP8.45□□□□□ -1.06
CDH3-209ENST00000569080 ZNF560Q96MR9 790 aa8.45□□□□□ -1.06
CDH3-209ENST00000569080 PRRX2Q99811 253 aa8.45□□□□□ -1.06
CDH3-209ENST00000569080 KXD1Q9BQD3 176 aa8.45□□□□□ -1.06
CDH3-209ENST00000569080 CORO1BQ9BR76 489 aa8.45□□□□□ -1.06
CDH3-209ENST00000569080 PYM1Q9BRP8 204 aaKnown RBP8.45□□□□□ -1.06
CDH3-209ENST00000569080 MKNK1Q9BUB5 465 aa8.45□□□□□ -1.06
CDH3-209ENST00000569080 MTMR12Q9C0I1 747 aa8.45□□□□□ -1.06
CDH3-209ENST00000569080 ZCWPW1Q9H0M4 648 aa8.45□□□□□ -1.06
CDH3-209ENST00000569080 BLZF1Q9H2G9 400 aa8.45□□□□□ -1.06
CDH3-209ENST00000569080 PCIF1Q9H4Z3 704 aa8.45□□□□□ -1.06
CDH3-209ENST00000569080 PDE11AQ9HCR9 933 aa8.45□□□□□ -1.06
CDH3-209ENST00000569080 ARHGEF3Q9NR81 526 aa8.45□□□□□ -1.06
CDH3-209ENST00000569080 AGPAT3Q9NRZ7 376 aa8.45□□□□□ -1.06
CDH3-209ENST00000569080 GDE1Q9NZC3 331 aa8.45□□□□□ -1.06
CDH3-209ENST00000569080 MRPS23Q9Y3D9 190 aaKnown RBP8.45□□□□□ -1.06
CDH3-209ENST00000569080 PTPRDP23468 1912 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 MIA3Q5JRA6 1907 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 DENND4CQ5VZ89 1909 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 KPNA7A9QM74 516 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 CYB561D2O14569 222 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 KIAA0391O15091 583 aaKnown RBP8.44□□□□□ -1.06
CDH3-209ENST00000569080 ECI2O75521 394 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 SOAT2O75908 522 aa8.44□□□□□ -1.06
CDH3-209ENST00000569080 LDHAP00338 332 aaKnown RBP8.44□□□□□ -1.06
CDH3-209ENST00000569080 PFKFB1P16118 471 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms