RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 NOBOXO60393 691 aa6.9□□□□□ -1.3
UBR1-208ENST00000569066 TSPAN15O95858 294 aa6.9□□□□□ -1.3
UBR1-208ENST00000569066 CARSP49589 748 aaKnown RBP6.9□□□□□ -1.3
UBR1-208ENST00000569066 NOMO2Q5JPE7 1267 aa6.9□□□□□ -1.3
UBR1-208ENST00000569066 TLDC1Q6P9B6 456 aa6.9□□□□□ -1.3
UBR1-208ENST00000569066 FAM111BQ6SJ93 734 aa6.9□□□□□ -1.3
UBR1-208ENST00000569066 RNF44Q7L0R7 432 aa6.9□□□□□ -1.3
UBR1-208ENST00000569066 SYT12Q8IV01 421 aa6.9□□□□□ -1.3
UBR1-208ENST00000569066 FAM46DQ8NEK8 389 aa6.9□□□□□ -1.3
UBR1-208ENST00000569066 IPO4Q8TEX9 1081 aaKnown RBP6.9□□□□□ -1.3
UBR1-208ENST00000569066 ATXN2LQ8WWM7 1075 aaKnown RBP6.9□□□□□ -1.3
UBR1-208ENST00000569066 MUL1Q969V5 352 aa6.9□□□□□ -1.3
UBR1-208ENST00000569066 MYLK2Q9H1R3 596 aa6.9□□□□□ -1.3
UBR1-208ENST00000569066 MEGF9Q9H1U4 602 aa6.9□□□□□ -1.3
UBR1-208ENST00000569066 MID2Q9UJV3 735 aa6.9□□□□□ -1.3
UBR1-208ENST00000569066 SLC39A10Q9ULF5 831 aa6.9□□□□□ -1.3
UBR1-208ENST00000569066 GPR52Q9Y2T5 361 aa6.9□□□□□ -1.3
UBR1-208ENST00000569066 DGKBQ9Y6T7 804 aa6.9□□□□□ -1.3
UBR1-208ENST00000569066 TRIM38O00635 465 aa6.9□□□□□ -1.31
UBR1-208ENST00000569066 FFAR2O15552 330 aa6.9□□□□□ -1.31
UBR1-208ENST00000569066 PJA2O43164 708 aa6.9□□□□□ -1.31
UBR1-208ENST00000569066 FARP2O94887 1054 aaPredicted RBP6.9□□□□□ -1.31
UBR1-208ENST00000569066 HK1P19367 917 aa6.9□□□□□ -1.31
UBR1-208ENST00000569066 CHRM3P20309 590 aa6.9□□□□□ -1.31
UBR1-208ENST00000569066 RAB32Q13637 225 aa6.9□□□□□ -1.31
UBR1-208ENST00000569066 BOP1Q14137 746 aaKnown RBP6.9□□□□□ -1.31
UBR1-208ENST00000569066 ARHGAP15Q53QZ3 475 aa6.9□□□□□ -1.31
UBR1-208ENST00000569066 NT5DC1Q5TFE4 455 aa6.9□□□□□ -1.31
UBR1-208ENST00000569066 MED25Q71SY5 747 aa6.9□□□□□ -1.31
UBR1-208ENST00000569066 OR14A2Q96R54 314 aa6.9□□□□□ -1.31
UBR1-208ENST00000569066 LMF1Q96S06 567 aa6.9□□□□□ -1.31
UBR1-208ENST00000569066 GPR35Q9HC97 309 aa6.9□□□□□ -1.31
UBR1-208ENST00000569066 OBP2BQ9NPH6 170 aa6.9□□□□□ -1.31
UBR1-208ENST00000569066 SH3BP1Q9Y3L3 701 aa6.9□□□□□ -1.31
UBR1-208ENST00000569066 LGALS16A8MUM7 142 aa6.89□□□□□ -1.31
UBR1-208ENST00000569066 NUAK1O60285 661 aa6.89□□□□□ -1.31
UBR1-208ENST00000569066 RASSF9O75901 435 aa6.89□□□□□ -1.31
UBR1-208ENST00000569066 POMCP01189 267 aa6.89□□□□□ -1.31
UBR1-208ENST00000569066 PFKFB4Q16877 469 aa6.89□□□□□ -1.31
UBR1-208ENST00000569066 LIN54Q6MZP7 749 aa6.89□□□□□ -1.31
UBR1-208ENST00000569066 OGFOD2Q6N063 350 aa6.89□□□□□ -1.31
UBR1-208ENST00000569066 PDSS2Q86YH6 399 aa6.89□□□□□ -1.31
UBR1-208ENST00000569066 NEU1Q99519 415 aa6.89□□□□□ -1.31
UBR1-208ENST00000569066 CPPED1Q9BRF8 314 aaPredicted RBP6.89□□□□□ -1.31
UBR1-208ENST00000569066 STK33Q9BYT3 514 aa6.89□□□□□ -1.31
UBR1-208ENST00000569066 PRDM16Q9HAZ2 1276 aa6.89□□□□□ -1.31
UBR1-208ENST00000569066 PODXLO00592 558 aa6.89□□□□□ -1.31
UBR1-208ENST00000569066 AMHP03971 560 aa6.89□□□□□ -1.31
UBR1-208ENST00000569066 FCER1AP12319 257 aa6.89□□□□□ -1.31
UBR1-208ENST00000569066 MYL4P12829 197 aa6.89□□□□□ -1.31
UBR1-208ENST00000569066 GRK6P43250 576 aa6.89□□□□□ -1.31
UBR1-208ENST00000569066 SLFN5Q08AF3 891 aa6.89□□□□□ -1.31
UBR1-208ENST00000569066 FKBP15Q5T1M5 1219 aa6.89□□□□□ -1.31
UBR1-208ENST00000569066 NLGN4YQ8NFZ3 816 aaPredicted RBP6.89□□□□□ -1.31
UBR1-208ENST00000569066 HEPHQ9BQS7 1158 aa6.89□□□□□ -1.31
UBR1-208ENST00000569066 SORBS1Q9BX66 1292 aaKnown RBP6.89□□□□□ -1.31
UBR1-208ENST00000569066 RLIMQ9NVW2 624 aa6.89□□□□□ -1.31
UBR1-208ENST00000569066 HDAC9Q9UKV0 1011 aa6.89□□□□□ -1.31
UBR1-208ENST00000569066 CDYLQ9Y232 598 aa6.89□□□□□ -1.31
UBR1-208ENST00000569066 DUSP10Q9Y6W6 482 aa6.89□□□□□ -1.31
UBR1-208ENST00000569066 ACKR2O00590 384 aa6.88□□□□□ -1.31
UBR1-208ENST00000569066 TNFRSF6BO95407 300 aa6.88□□□□□ -1.31
UBR1-208ENST00000569066 CSTBP04080 98 aaKnown RBP6.88□□□□□ -1.31
UBR1-208ENST00000569066 CHN2P52757 468 aa6.88□□□□□ -1.31
UBR1-208ENST00000569066 BLMHQ13867 455 aa6.88□□□□□ -1.31
UBR1-208ENST00000569066 ZNF124Q15973 351 aa6.88□□□□□ -1.31
UBR1-208ENST00000569066 MCTP1Q6DN14 999 aa6.88□□□□□ -1.31
UBR1-208ENST00000569066 PGBD2Q6P3X8 592 aa6.88□□□□□ -1.31
UBR1-208ENST00000569066 GPRIN1Q7Z2K8 1008 aa6.88□□□□□ -1.31
UBR1-208ENST00000569066 FAM124AQ86V42 546 aa6.88□□□□□ -1.31
UBR1-208ENST00000569066 TAX1BP1Q86VP1 789 aa6.88□□□□□ -1.31
UBR1-208ENST00000569066 FANCBQ8NB91 859 aa6.88□□□□□ -1.31
UBR1-208ENST00000569066 GLIS1Q8NBF1 620 aa6.88□□□□□ -1.31
UBR1-208ENST00000569066 ZC3H10Q96K80 434 aaKnown RBP6.88□□□□□ -1.31
UBR1-208ENST00000569066 TTYH3Q9C0H2 523 aa6.88□□□□□ -1.31
UBR1-208ENST00000569066 MS4A7Q9GZW8 240 aaPredicted RBP6.88□□□□□ -1.31
UBR1-208ENST00000569066 LRFN1Q9P244 771 aa6.88□□□□□ -1.31
UBR1-208ENST00000569066 XPR1Q9UBH6 696 aa6.88□□□□□ -1.31
UBR1-208ENST00000569066 ZNF212Q9UDV6 495 aa6.88□□□□□ -1.31
UBR1-208ENST00000569066 CCDC78A2IDD5 438 aa6.88□□□□□ -1.31
UBR1-208ENST00000569066 TOB1P50616 345 aaPredicted RBP6.88□□□□□ -1.31
UBR1-208ENST00000569066 GRM7Q14831 915 aa6.88□□□□□ -1.31
UBR1-208ENST00000569066 PDCD2Q16342 344 aaPredicted RBP6.88□□□□□ -1.31
UBR1-208ENST00000569066 KCTD20Q7Z5Y7 419 aa6.88□□□□□ -1.31
UBR1-208ENST00000569066 ZFPM1Q8IX07 1006 aa6.88□□□□□ -1.31
UBR1-208ENST00000569066 CACNA2D3Q8IZS8 1091 aa6.88□□□□□ -1.31
UBR1-208ENST00000569066 A1CFQ9NQ94 594 aaKnown RBP6.88□□□□□ -1.31
UBR1-208ENST00000569066 IGSF9Q9P2J2 1179 aa6.88□□□□□ -1.31
UBR1-208ENST00000569066 PLEKHM1Q9Y4G2 1056 aa6.88□□□□□ -1.31
UBR1-208ENST00000569066 DRGXA6NNA5 263 aa6.87□□□□□ -1.31
UBR1-208ENST00000569066 H7C4K7 107 aa6.87□□□□□ -1.31
UBR1-208ENST00000569066 RAB27BO00194 218 aa6.87□□□□□ -1.31
UBR1-208ENST00000569066 THAP12O43422 761 aa6.87□□□□□ -1.31
UBR1-208ENST00000569066 TLR5O60602 858 aa6.87□□□□□ -1.31
UBR1-208ENST00000569066 ALAS1P13196 640 aa6.87□□□□□ -1.31
UBR1-208ENST00000569066 GRM1Q13255 1194 aa6.87□□□□□ -1.31
UBR1-208ENST00000569066 BIRC3Q13489 604 aa6.87□□□□□ -1.31
UBR1-208ENST00000569066 ELAVL1Q15717 326 aaKnown RBP6.87□□□□□ -1.31
UBR1-208ENST00000569066 SLC44A4Q53GD3 710 aa6.87□□□□□ -1.31
UBR1-208ENST00000569066 USP49Q70CQ1 688 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms