RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 TFAP2BQ92481 460 aa7.53□□□□□ -1.2
SMG1-215ENST00000568239 SNX27Q96L92 541 aa7.53□□□□□ -1.2
SMG1-215ENST00000568239 SDCBP2Q9H190 292 aa7.53□□□□□ -1.2
SMG1-215ENST00000568239 ANKZF1Q9H8Y5 726 aa7.53□□□□□ -1.2
SMG1-215ENST00000568239 PLEKHA5Q9HAU0 1116 aa7.53□□□□□ -1.2
SMG1-215ENST00000568239 TRMT13Q9NUP7 481 aaKnown RBP7.53□□□□□ -1.2
SMG1-215ENST00000568239 HMGXB4Q9UGU5 601 aa7.53□□□□□ -1.2
SMG1-215ENST00000568239 DDX20Q9UHI6 824 aaKnown RBP7.53□□□□□ -1.2
SMG1-215ENST00000568239 ANAPC7Q9UJX3 599 aa7.53□□□□□ -1.2
SMG1-215ENST00000568239 IPPQ9Y573 584 aa7.53□□□□□ -1.2
SMG1-215ENST00000568239 CEP83Q9Y592 693 aa7.53□□□□□ -1.2
SMG1-215ENST00000568239 TRPV2Q9Y5S1 764 aa7.53□□□□□ -1.2
SMG1-215ENST00000568239 CASP8AP2Q9UKL3 1982 aa7.52□□□□□ -1.21
SMG1-215ENST00000568239 ABCB7O75027 752 aa7.52□□□□□ -1.21
SMG1-215ENST00000568239 CYP1A1P04798 512 aaPredicted RBP7.52□□□□□ -1.21
SMG1-215ENST00000568239 COMTP21964 271 aa7.52□□□□□ -1.21
SMG1-215ENST00000568239 MAP2K2P36507 400 aa7.52□□□□□ -1.21
SMG1-215ENST00000568239 CLCN6P51797 869 aa7.52□□□□□ -1.21
SMG1-215ENST00000568239 TUBB4BP68371 445 aa7.52□□□□□ -1.21
SMG1-215ENST00000568239 NOMO3P69849 1222 aa7.52□□□□□ -1.21
SMG1-215ENST00000568239 POU5F1Q01860 360 aaKnown RBP7.52□□□□□ -1.21
SMG1-215ENST00000568239 CENPCQ03188 943 aa7.52□□□□□ -1.21
SMG1-215ENST00000568239 ITGA7Q13683 1181 aa7.52□□□□□ -1.21
SMG1-215ENST00000568239 LIN9Q5TKA1 542 aa7.52□□□□□ -1.21
SMG1-215ENST00000568239 TRIM72Q6ZMU5 477 aa7.52□□□□□ -1.21
SMG1-215ENST00000568239 SLFN11Q7Z7L1 901 aa7.52□□□□□ -1.21
SMG1-215ENST00000568239 RNF169Q8NCN4 708 aa7.52□□□□□ -1.21
SMG1-215ENST00000568239 HEXIM2Q96MH2 286 aaKnown RBP7.52□□□□□ -1.21
SMG1-215ENST00000568239 PNKPQ96T60 521 aa7.52□□□□□ -1.21
SMG1-215ENST00000568239 TRIM7Q9C029 511 aa7.52□□□□□ -1.21
SMG1-215ENST00000568239 GOLGA2P5Q9HBQ8 144 aa7.52□□□□□ -1.21
SMG1-215ENST00000568239 RBM12Q9NTZ6 932 aaKnown RBP7.52□□□□□ -1.21
SMG1-215ENST00000568239 CNTN6Q9UQ52 1028 aa7.52□□□□□ -1.21
SMG1-215ENST00000568239 SMIM28A0A1B0GU29 152 aa7.52□□□□□ -1.21
SMG1-215ENST00000568239 PPEF2O14830 753 aa7.52□□□□□ -1.21
SMG1-215ENST00000568239 CHRNA1P02708 482 aa7.52□□□□□ -1.21
SMG1-215ENST00000568239 INHAP05111 366 aa7.52□□□□□ -1.21
SMG1-215ENST00000568239 CYP1A2P05177 515 aa7.52□□□□□ -1.21
SMG1-215ENST00000568239 HOXC8P31273 242 aa7.52□□□□□ -1.21
SMG1-215ENST00000568239 SSR1P43307 286 aaKnown RBP7.52□□□□□ -1.21
SMG1-215ENST00000568239 ZNF132P52740 706 aa7.52□□□□□ -1.21
SMG1-215ENST00000568239 ZNF211Q13398 564 aaPredicted RBP7.52□□□□□ -1.21
SMG1-215ENST00000568239 TMCO3Q6UWJ1 677 aa7.52□□□□□ -1.21
SMG1-215ENST00000568239 ADAT2Q7Z6V5 191 aaKnown RBP7.52□□□□□ -1.21
SMG1-215ENST00000568239 SERINC5Q86VE9 423 aa7.52□□□□□ -1.21
SMG1-215ENST00000568239 NT5DC4Q86YG4 428 aa7.52□□□□□ -1.21
SMG1-215ENST00000568239 TMEM35BQ8NCS4 154 aa7.52□□□□□ -1.21
SMG1-215ENST00000568239 KLHDC9Q8NEP7 349 aa7.52□□□□□ -1.21
SMG1-215ENST00000568239 ZNF296Q8WUU4 475 aaPredicted RBP7.52□□□□□ -1.21
SMG1-215ENST00000568239 GLT1D1Q96MS3 346 aa7.52□□□□□ -1.21
SMG1-215ENST00000568239 TWNKQ96RR1 684 aa7.52□□□□□ -1.21
SMG1-215ENST00000568239 AP1M1Q9BXS5 423 aa7.52□□□□□ -1.21
SMG1-215ENST00000568239 UVRAGQ9P2Y5 699 aa7.52□□□□□ -1.21
SMG1-215ENST00000568239 MYO1FO00160 1098 aa7.51□□□□□ -1.21
SMG1-215ENST00000568239 SEC31AO94979 1220 aaKnown RBP7.51□□□□□ -1.21
SMG1-215ENST00000568239 GJB6O95452 261 aa7.51□□□□□ -1.21
SMG1-215ENST00000568239 GHRP10912 638 aa7.51□□□□□ -1.21
SMG1-215ENST00000568239 NDST1P52848 882 aa7.51□□□□□ -1.21
SMG1-215ENST00000568239 ACLYP53396 1101 aa7.51□□□□□ -1.21
SMG1-215ENST00000568239 RAD23BP54727 409 aa7.51□□□□□ -1.21
SMG1-215ENST00000568239 SLC7A5Q01650 507 aa7.51□□□□□ -1.21
SMG1-215ENST00000568239 LLGL1Q15334 1064 aa7.51□□□□□ -1.21
SMG1-215ENST00000568239 UBXN11Q5T124 520 aa7.51□□□□□ -1.21
SMG1-215ENST00000568239 CPNE8Q86YQ8 564 aa7.51□□□□□ -1.21
SMG1-215ENST00000568239 KLHL7Q8IXQ5 586 aa7.51□□□□□ -1.21
SMG1-215ENST00000568239 UBR7Q8N806 425 aa7.51□□□□□ -1.21
SMG1-215ENST00000568239 CXorf38Q8TB03 319 aa7.51□□□□□ -1.21
SMG1-215ENST00000568239 TRIM11Q96F44 468 aa7.51□□□□□ -1.21
SMG1-215ENST00000568239 HES6Q96HZ4 224 aa7.51□□□□□ -1.21
SMG1-215ENST00000568239 PBKQ96KB5 322 aa7.51□□□□□ -1.21
SMG1-215ENST00000568239 ZFP42Q96MM3 310 aa7.51□□□□□ -1.21
SMG1-215ENST00000568239 ZSWIM1Q9BR11 485 aa7.51□□□□□ -1.21
SMG1-215ENST00000568239 BCO2Q9BYV7 579 aa7.51□□□□□ -1.21
SMG1-215ENST00000568239 SYNCQ9H7C4 482 aa7.51□□□□□ -1.21
SMG1-215ENST00000568239 ST7Q9NRC1 585 aa7.51□□□□□ -1.21
SMG1-215ENST00000568239 RNF14Q9UBS8 474 aa7.51□□□□□ -1.21
SMG1-215ENST00000568239 UBQLN1Q9UMX0 589 aaKnown RBP7.51□□□□□ -1.21
SMG1-215ENST00000568239 TRIM17Q9Y577 477 aa7.51□□□□□ -1.21
SMG1-215ENST00000568239 GRIN2DO15399 1336 aa7.51□□□□□ -1.21
SMG1-215ENST00000568239 MEIS3P2A8K0S8 358 aa7.51□□□□□ -1.21
SMG1-215ENST00000568239 MED7O43513 233 aa7.51□□□□□ -1.21
SMG1-215ENST00000568239 FKTNO75072 461 aa7.51□□□□□ -1.21
SMG1-215ENST00000568239 CILPO75339 1184 aa7.51□□□□□ -1.21
SMG1-215ENST00000568239 MYBL1P10243 752 aa7.51□□□□□ -1.21
SMG1-215ENST00000568239 H2AFXP16104 143 aaPredicted RBP7.51□□□□□ -1.21
SMG1-215ENST00000568239 MARCKSL1P49006 195 aa7.51□□□□□ -1.21
SMG1-215ENST00000568239 VSNL1P62760 191 aa7.51□□□□□ -1.21
SMG1-215ENST00000568239 ZFYVE27Q5T4F4 411 aa7.51□□□□□ -1.21
SMG1-215ENST00000568239 DAB2IPQ5VWQ8 1189 aa7.51□□□□□ -1.21
SMG1-215ENST00000568239 MON1BQ7L1V2 547 aa7.51□□□□□ -1.21
SMG1-215ENST00000568239 ERICH1Q86X53 443 aa7.51□□□□□ -1.21
SMG1-215ENST00000568239 UBL4BQ8N7F7 174 aa7.51□□□□□ -1.21
SMG1-215ENST00000568239 KRT35Q92764 455 aa7.51□□□□□ -1.21
SMG1-215ENST00000568239 LPPQ93052 612 aa7.51□□□□□ -1.21
SMG1-215ENST00000568239 ZBTB9Q96C00 473 aa7.51□□□□□ -1.21
SMG1-215ENST00000568239 TMEM176AQ96HP8 235 aa7.51□□□□□ -1.21
SMG1-215ENST00000568239 LRRC1Q9BTT6 524 aa7.51□□□□□ -1.21
SMG1-215ENST00000568239 ELOVL4Q9GZR5 314 aa7.51□□□□□ -1.21
SMG1-215ENST00000568239 HMX1Q9NP08 348 aaPredicted RBP7.51□□□□□ -1.21
SMG1-215ENST00000568239 ABCB6Q9NP58 842 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms