RNA–Protein interactions for RNA: ENST00000567947.1

CBFB-208, Transcript of core-binding factor subunit beta, human

TSL 3

Gene CBFB, Length 610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBFB-208	ENST00000567947	DEFB132	Q7Z7B7	95 aa		5.72	□□□□□ -1.49
CBFB-208	ENST00000567947	SNX33	Q8WV41	574 aa		5.72	□□□□□ -1.49
CBFB-208	ENST00000567947	USP7	Q93009	1102 aa		5.72	□□□□□ -1.49
CBFB-208	ENST00000567947	ACAP3	Q96P50	834 aa		5.72	□□□□□ -1.49
CBFB-208	ENST00000567947	CPPED1	Q9BRF8	314 aa	Predicted RBP	5.72	□□□□□ -1.49
CBFB-208	ENST00000567947	KCTD10	Q9H3F6	313 aa		5.72	□□□□□ -1.49
CBFB-208	ENST00000567947	CHMP4B	Q9H444	224 aa	Known RBP	5.72	□□□□□ -1.49
CBFB-208	ENST00000567947	CALCOCO1	Q9P1Z2	691 aa		5.72	□□□□□ -1.49
CBFB-208	ENST00000567947	CLCA2	Q9UQC9	943 aa		5.72	□□□□□ -1.49
CBFB-208	ENST00000567947	RAD50	Q92878	1312 aa		5.72	□□□□□ -1.49
CBFB-208	ENST00000567947	TMEM191C	A6NGB0	347 aa		5.71	□□□□□ -1.5
CBFB-208	ENST00000567947	FOXN1	O15353	648 aa		5.71	□□□□□ -1.5
CBFB-208	ENST00000567947	RECQL4	O94761	1208 aa		5.71	□□□□□ -1.5
CBFB-208	ENST00000567947	ZFP36	P26651	326 aa	Known RBP	5.71	□□□□□ -1.5
CBFB-208	ENST00000567947	EIF4A2	Q14240	407 aa	Known RBP	5.71	□□□□□ -1.5
CBFB-208	ENST00000567947	EZH2	Q15910	746 aa	Known RBP	5.71	□□□□□ -1.5
CBFB-208	ENST00000567947	DNTTIP2	Q5QJE6	756 aa	Known RBP	5.71	□□□□□ -1.5
CBFB-208	ENST00000567947	SMC5	Q8IY18	1101 aa		5.71	□□□□□ -1.5
CBFB-208	ENST00000567947	RPUSD2	Q8IZ73	545 aa	Known RBP	5.71	□□□□□ -1.5
CBFB-208	ENST00000567947	CLRN3	Q8NCR9	226 aa		5.71	□□□□□ -1.5
CBFB-208	ENST00000567947	AGAP2	Q99490	1192 aa		5.71	□□□□□ -1.5
CBFB-208	ENST00000567947	TTC1	Q99614	292 aa		5.71	□□□□□ -1.5
CBFB-208	ENST00000567947	NDC1	Q9BTX1	674 aa		5.71	□□□□□ -1.5
CBFB-208	ENST00000567947	SLC46A2	Q9BY10	475 aa		5.71	□□□□□ -1.5
CBFB-208	ENST00000567947	KCNH6	Q9H252	994 aa		5.71	□□□□□ -1.5
CBFB-208	ENST00000567947	TOPORS	Q9NS56	1045 aa	Predicted RBP	5.71	□□□□□ -1.5
CBFB-208	ENST00000567947	DMRT1	Q9Y5R6	373 aa		5.71	□□□□□ -1.5
CBFB-208	ENST00000567947	MYH14	Q7Z406	1995 aa	Known RBP	5.71	□□□□□ -1.5
CBFB-208	ENST00000567947	AHRR	A9YTQ3	701 aa		5.7	□□□□□ -1.5
CBFB-208	ENST00000567947		B5MCH6	92 aa		5.7	□□□□□ -1.5
CBFB-208	ENST00000567947	TULP2	O00295	520 aa		5.7	□□□□□ -1.5
CBFB-208	ENST00000567947	RPS6KA4	O75676	772 aa		5.7	□□□□□ -1.5
CBFB-208	ENST00000567947	GAST	P01350	101 aa		5.7	□□□□□ -1.5
CBFB-208	ENST00000567947	PTMA	P06454	111 aa	Known RBP	5.7	□□□□□ -1.5
CBFB-208	ENST00000567947	ENPP1	P22413	925 aa		5.7	□□□□□ -1.5
CBFB-208	ENST00000567947	COL10A1	Q03692	680 aa		5.7	□□□□□ -1.5
CBFB-208	ENST00000567947	RRS1	Q15050	365 aa	Known RBP	5.7	□□□□□ -1.5
CBFB-208	ENST00000567947	SLC15A2	Q16348	729 aa		5.7	□□□□□ -1.5
CBFB-208	ENST00000567947	KRTAP15-1	Q3LI76	137 aa		5.7	□□□□□ -1.5
CBFB-208	ENST00000567947	DDX46	Q7L014	1031 aa	Known RBP	5.7	□□□□□ -1.5
CBFB-208	ENST00000567947	SYNE4	Q8N205	404 aa		5.7	□□□□□ -1.5
CBFB-208	ENST00000567947	TIGD1	Q96MW7	591 aa		5.7	□□□□□ -1.5
CBFB-208	ENST00000567947	OGFR	Q9NZT2	677 aa		5.7	□□□□□ -1.5
CBFB-208	ENST00000567947	C11orf21	Q9P2W6	132 aa		5.7	□□□□□ -1.5
CBFB-208	ENST00000567947	SORCS3	Q9UPU3	1222 aa		5.7	□□□□□ -1.5
CBFB-208	ENST00000567947	CHST2	Q9Y4C5	530 aa		5.7	□□□□□ -1.5
CBFB-208	ENST00000567947	GOLGB1	Q14789	3259 aa	Known RBP	5.7	□□□□□ -1.5
CBFB-208	ENST00000567947	CEMIP	Q8WUJ3	1361 aa		5.69	□□□□□ -1.5
CBFB-208	ENST00000567947	BRCA1	P38398	1863 aa	Known RBP	5.69	□□□□□ -1.5
CBFB-208	ENST00000567947	KDM6A	O15550	1401 aa	Predicted RBP	5.69	□□□□□ -1.5
CBFB-208	ENST00000567947	TLDC2	A0PJX2	215 aa		5.69	□□□□□ -1.5
CBFB-208	ENST00000567947	TPM3	P06753	285 aa		5.69	□□□□□ -1.5
CBFB-208	ENST00000567947	PHKG2	P15735	406 aa		5.69	□□□□□ -1.5
CBFB-208	ENST00000567947	CTSS	P25774	331 aa		5.69	□□□□□ -1.5
CBFB-208	ENST00000567947	HSD3B2	P26439	372 aa		5.69	□□□□□ -1.5
CBFB-208	ENST00000567947	CRHR1	P34998	444 aa		5.69	□□□□□ -1.5
CBFB-208	ENST00000567947	ID4	P47928	161 aa		5.69	□□□□□ -1.5
CBFB-208	ENST00000567947	LGALS4	P56470	323 aa		5.69	□□□□□ -1.5
CBFB-208	ENST00000567947	CSRP2	Q16527	193 aa		5.69	□□□□□ -1.5
CBFB-208	ENST00000567947	PLEKHO1	Q53GL0	409 aa	Predicted RBP	5.69	□□□□□ -1.5
CBFB-208	ENST00000567947	BTNL9	Q6UXG8	535 aa		5.69	□□□□□ -1.5
CBFB-208	ENST00000567947	ABHD15	Q6UXT9	468 aa		5.69	□□□□□ -1.5
CBFB-208	ENST00000567947	MORC1	Q86VD1	984 aa		5.69	□□□□□ -1.5
CBFB-208	ENST00000567947	CPT1C	Q8TCG5	803 aa		5.69	□□□□□ -1.5
CBFB-208	ENST00000567947	DCLRE1C	Q96SD1	692 aa	Known RBP	5.69	□□□□□ -1.5
CBFB-208	ENST00000567947	MLST8	Q9BVC4	326 aa		5.69	□□□□□ -1.5
CBFB-208	ENST00000567947	CAAP1	Q9H8G2	361 aa		5.69	□□□□□ -1.5
CBFB-208	ENST00000567947	DIAPH3	Q9NSV4	1193 aa		5.69	□□□□□ -1.5
CBFB-208	ENST00000567947	GPRC5D	Q9NZD1	345 aa		5.69	□□□□□ -1.5
CBFB-208	ENST00000567947	ZHX1	Q9UKY1	873 aa	Predicted RBP	5.69	□□□□□ -1.5
CBFB-208	ENST00000567947	C4A	P0C0L4	1744 aa		5.68	□□□□□ -1.5
CBFB-208	ENST00000567947	TJP1	Q07157	1748 aa		5.68	□□□□□ -1.5
CBFB-208	ENST00000567947	NRXN2	Q9P2S2	1712 aa		5.68	□□□□□ -1.5
CBFB-208	ENST00000567947	DIRC3	C9JPN6	131 aa		5.68	□□□□□ -1.5
CBFB-208	ENST00000567947	HTATSF1	O43719	755 aa	Known RBP	5.68	□□□□□ -1.5
CBFB-208	ENST00000567947	PRAMEF4	O60810	478 aa		5.68	□□□□□ -1.5
CBFB-208	ENST00000567947	RAMP2	O60895	175 aa		5.68	□□□□□ -1.5
CBFB-208	ENST00000567947	ITGA10	O75578	1167 aa		5.68	□□□□□ -1.5
CBFB-208	ENST00000567947	SCAF4	O95104	1147 aa	Known RBP	5.68	□□□□□ -1.5
CBFB-208	ENST00000567947	LPL	P06858	475 aa		5.68	□□□□□ -1.5
CBFB-208	ENST00000567947	APBA1	Q02410	837 aa		5.68	□□□□□ -1.5
CBFB-208	ENST00000567947	UGT8	Q16880	541 aa		5.68	□□□□□ -1.5
CBFB-208	ENST00000567947	MST1L	Q2TV78	715 aa		5.68	□□□□□ -1.5
CBFB-208	ENST00000567947	CT83	Q5H943	113 aa		5.68	□□□□□ -1.5
CBFB-208	ENST00000567947	LY6G5C	Q5SRR4	150 aa		5.68	□□□□□ -1.5
CBFB-208	ENST00000567947	GJC2	Q5T442	439 aa	Predicted RBP	5.68	□□□□□ -1.5
CBFB-208	ENST00000567947	AFAP1L2	Q8N4X5	818 aa		5.68	□□□□□ -1.5
CBFB-208	ENST00000567947	ZNF480	Q8WV37	535 aa		5.68	□□□□□ -1.5
CBFB-208	ENST00000567947	MYEOV	Q96EZ4	313 aa		5.68	□□□□□ -1.5
CBFB-208	ENST00000567947	RAX2	Q96IS3	184 aa		5.68	□□□□□ -1.5
CBFB-208	ENST00000567947	ZNF830	Q96NB3	372 aa	Predicted RBP	5.68	□□□□□ -1.5
CBFB-208	ENST00000567947	CDC5L	Q99459	802 aa	Known RBP	5.68	□□□□□ -1.5
CBFB-208	ENST00000567947	EPC1	Q9H2F5	836 aa		5.68	□□□□□ -1.5
CBFB-208	ENST00000567947	SPON1	Q9HCB6	807 aa		5.68	□□□□□ -1.5
CBFB-208	ENST00000567947	HDAC5	Q9UQL6	1122 aa		5.68	□□□□□ -1.5
CBFB-208	ENST00000567947	KIF16B	Q96L93	1317 aa		5.68	□□□□□ -1.5
CBFB-208	ENST00000567947	DLG5	Q8TDM6	1919 aa		5.68	□□□□□ -1.5
CBFB-208	ENST00000567947	PALLD	Q8WX93	1383 aa		5.67	□□□□□ -1.5
CBFB-208	ENST00000567947	GAGE12B	A1L429	117 aa		5.67	□□□□□ -1.5
CBFB-208	ENST00000567947	GRID2IP	A4D2P6	1211 aa		5.67	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms