RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	PYM1	Q9BRP8	204 aa	Known RBP	7.48	□□□□□ -1.21
SF3B3-209	ENST00000567635	PCIF1	Q9H4Z3	704 aa		7.48	□□□□□ -1.21
SF3B3-209	ENST00000567635	MAGEF1	Q9HAY2	307 aa		7.48	□□□□□ -1.21
SF3B3-209	ENST00000567635	AVEN	Q9NQS1	362 aa	Predicted RBP	7.48	□□□□□ -1.21
SF3B3-209	ENST00000567635	GDE1	Q9NZC3	331 aa		7.48	□□□□□ -1.21
SF3B3-209	ENST00000567635	WNT16	Q9UBV4	365 aa		7.48	□□□□□ -1.21
SF3B3-209	ENST00000567635	DSE	Q9UL01	958 aa		7.48	□□□□□ -1.21
SF3B3-209	ENST00000567635	DUSP12	Q9UNI6	340 aa		7.48	□□□□□ -1.21
SF3B3-209	ENST00000567635	MRPS23	Q9Y3D9	190 aa	Known RBP	7.48	□□□□□ -1.21
SF3B3-209	ENST00000567635	INSL5	Q9Y5Q6	135 aa		7.48	□□□□□ -1.21
SF3B3-209	ENST00000567635	ATG2B	Q96BY7	2078 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	GREB1	Q4ZG55	1949 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	PVALEF	A0A1B0GWK0	134 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	GOLGA8IP	A6NC78	632 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	ZNF233	A6NK53	670 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	GOLGA8J	A6NMD2	632 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	KPNA7	A9QM74	516 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	STK25	O00506	426 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	CYB561D2	O14569	222 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	KIAA0391	O15091	583 aa	Known RBP	7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	EIF3D	O15371	548 aa	Known RBP eCLIP	7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	MICAL2	O94851	1124 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	CYP11A1	P05108	521 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	CFH	P08603	1231 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	SLFN14	P0C7P3	912 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	SRF	P11831	508 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	ODC1	P11926	461 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	HOXD13	P35453	343 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	AFM	P43652	599 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	TAF6	P49848	677 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	EPHB3	P54753	998 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	PTPN5	P54829	565 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	TFAM	Q00059	246 aa	Known RBP	7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	TWF1	Q12792	350 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	DUSP4	Q13115	394 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	SV2C	Q496J9	727 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	CYP4A22	Q5TCH4	519 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	IQCE	Q6IPM2	695 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	CENPP	Q6IPU0	288 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	PARM1	Q6UWI2	310 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	EPM2AIP1	Q7L775	607 aa	Predicted RBP	7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	BRSK2	Q8IWQ3	736 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	EFCAB13	Q8IY85	973 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	CEP57L1	Q8IYX8	460 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	SIX5	Q8N196	739 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	THEM5	Q8N1Q8	247 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	GPD1L	Q8N335	351 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	CSGALNACT2	Q8N6G5	542 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	GLIS3	Q8NEA6	775 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	FLCN	Q8NFG4	579 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	ST13P5	Q8NFI4	369 aa	Predicted RBP	7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	NOC3L	Q8WTT2	800 aa	Known RBP	7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	ING5	Q8WYH8	240 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	MCRS1	Q96EZ8	462 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	CBWD1	Q9BRT8	395 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	RPP25	Q9BUL9	199 aa	Known RBP	7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	FGFBP2	Q9BYJ0	223 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	IRF2BPL	Q9H1B7	796 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	KIAA1586	Q9HCI6	787 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	PDE11A	Q9HCR9	933 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	SLC2A4RG	Q9NR83	387 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	RBAK	Q9NYW8	714 aa	Predicted RBP	7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	CEP72	Q9P209	647 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	ZDHHC9	Q9Y397	364 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	NUMBL	Q9Y6R0	609 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	FAM186A	A6NE01	2351 aa		7.47	□□□□□ -1.21
SF3B3-209	ENST00000567635	ANAPC1	Q9H1A4	1944 aa		7.46	□□□□□ -1.21
SF3B3-209	ENST00000567635	TSC2	P49815	1807 aa		7.46	□□□□□ -1.21
SF3B3-209	ENST00000567635	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	KRBA1	A5PL33	1030 aa		7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	VNN2	O95498	520 aa		7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	OR4Q2	P0C623	313 aa		7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	NPR3	P17342	541 aa		7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	CMA1	P23946	247 aa		7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	PNPLA4	P41247	253 aa		7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	ALDH1A3	P47895	512 aa		7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	TUFM	P49411	452 aa	Known RBP	7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	WNT7B	P56706	349 aa		7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	SNRPF	P62306	86 aa	Known RBP	7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	GPC5	P78333	572 aa		7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	KRT85	P78386	507 aa		7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	RBP5	P82980	135 aa		7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	NHLH1	Q02575	133 aa		7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	SMARCB1	Q12824	385 aa		7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	PLD1	Q13393	1074 aa		7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	SURF1	Q15526	300 aa		7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	DUOXA2	Q1HG44	320 aa		7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	SLC5A9	Q2M3M2	681 aa		7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	FAM26F	Q5R3K3	315 aa		7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	WSCD1	Q658N2	575 aa		7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	UNC13D	Q70J99	1090 aa		7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	PDZD4	Q76G19	769 aa	Predicted RBP	7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	NPAS3	Q8IXF0	933 aa		7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	HS6ST3	Q8IZP7	471 aa		7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	TMEM105	Q8N8V8	129 aa		7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	C1orf127	Q8N9H9	656 aa		7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	ATAD1	Q8NBU5	361 aa		7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	LEMD2	Q8NC56	503 aa		7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	PRSS33	Q8NF86	280 aa		7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	GPR152	Q8TDT2	470 aa		7.46	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms