RNA–Protein interactions for RNA: ENST00000567188.5

CNOT1-211, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best)

Gene CNOT1, Length 7,830 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-211ENST00000567188 TRIM45Q9H8W5 580 aaPredicted RBP6.28□□□□□ -1.4
CNOT1-211ENST00000567188 ARMCX3Q9UH62 379 aaPredicted RBP6.28□□□□□ -1.4
CNOT1-211ENST00000567188 CNTNAP5Q8WYK1 1306 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 STX7O15400 261 aaKnown RBP6.28□□□□□ -1.4
CNOT1-211ENST00000567188 ADORA2AP29274 412 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 LIG4P49917 911 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 ARFIP2P53365 341 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 TSGA10IPQ3SY00 556 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 SBK1Q52WX2 424 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 TMEM63BQ5T3F8 832 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 KRT39Q6A163 491 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 DEFB128Q7Z7B8 93 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 FUKQ8N0W3 1084 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 SIX5Q8N196 739 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 MYCBPAPQ8TBZ2 947 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 BARHL2Q9NY43 387 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 POTECB2RU33 542 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 VTNP04004 478 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 DLATP10515 647 aaKnown RBP6.28□□□□□ -1.4
CNOT1-211ENST00000567188 DDIT3P35638 169 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 LRRC49Q8IUZ0 686 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 VPS37AQ8NEZ2 397 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 GANCQ8TET4 914 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 COPS5Q92905 334 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 MMS19Q96T76 1030 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 EPS8L2Q9H6S3 715 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 TAB2Q9NYJ8 693 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 PCDHA7Q9UN72 937 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 HPS5Q9UPZ3 1129 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 HBS1LQ9Y450 684 aaKnown RBP6.28□□□□□ -1.4
CNOT1-211ENST00000567188 IPPQ9Y573 584 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 BAZ2AQ9UIF9 1905 aaKnown RBP6.28□□□□□ -1.4
CNOT1-211ENST00000567188 TMEM150BA6NC51 233 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 ASAP2O43150 1006 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 SLC37A4O43826 429 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 WBP4O75554 376 aaKnown RBP6.28□□□□□ -1.4
CNOT1-211ENST00000567188 ELOA2Q8IYF1 753 aaPredicted RBP6.28□□□□□ -1.4
CNOT1-211ENST00000567188 TMEM143Q96AN5 459 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 MAGED4Q96JG8 741 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 FMO2Q99518 471 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 TRIM31Q9BZY9 425 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 GALNT8Q9NY28 637 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 BAG5Q9UL15 447 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 RAB21Q9UL25 225 aa6.28□□□□□ -1.4
CNOT1-211ENST00000567188 IGF2BP3O00425 579 aaKnown RBP eCLIP6.27□□□□□ -1.41e-9■■■□□ 16.3
CNOT1-211ENST00000567188 VWA5AO00534 786 aa6.27□□□□□ -1.4
CNOT1-211ENST00000567188 APOL1O14791 398 aa6.27□□□□□ -1.4
CNOT1-211ENST00000567188 ECEL1O95672 775 aa6.27□□□□□ -1.4
CNOT1-211ENST00000567188 OATP04181 439 aa6.27□□□□□ -1.4
CNOT1-211ENST00000567188 H2AFZP0C0S5 128 aa6.27□□□□□ -1.4
CNOT1-211ENST00000567188 ZNF12P17014 697 aa6.27□□□□□ -1.4
CNOT1-211ENST00000567188 KPNA2P52292 529 aaKnown RBP6.27□□□□□ -1.4
CNOT1-211ENST00000567188 RHBDL3P58872 404 aa6.27□□□□□ -1.4
CNOT1-211ENST00000567188 VSNL1P62760 191 aa6.27□□□□□ -1.4
CNOT1-211ENST00000567188 EXOSC10Q01780 885 aaKnown RBP6.27□□□□□ -1.4
CNOT1-211ENST00000567188 DMP1Q13316 513 aaPredicted RBP6.27□□□□□ -1.4
CNOT1-211ENST00000567188 BLMHQ13867 455 aa6.27□□□□□ -1.4
CNOT1-211ENST00000567188 PDXDC2PQ6P474 469 aa6.27□□□□□ -1.4
CNOT1-211ENST00000567188 H2AFVQ71UI9 128 aa6.27□□□□□ -1.4
CNOT1-211ENST00000567188 CDH24Q86UP0 819 aa6.27□□□□□ -1.4
CNOT1-211ENST00000567188 SPATA17Q96L03 361 aa6.27□□□□□ -1.4
CNOT1-211ENST00000567188 LBHD1Q9BQE6 289 aaPredicted RBP6.27□□□□□ -1.4
CNOT1-211ENST00000567188 UBE2OQ9C0C9 1292 aaKnown RBP6.27□□□□□ -1.4
CNOT1-211ENST00000567188 TMEM165Q9HC07 324 aa6.27□□□□□ -1.4
CNOT1-211ENST00000567188 KMT5AQ9NQR1 393 aa6.27□□□□□ -1.4
CNOT1-211ENST00000567188 PIK3R2O00459 728 aa6.27□□□□□ -1.41
CNOT1-211ENST00000567188 PLCG1P19174 1290 aa6.27□□□□□ -1.41
CNOT1-211ENST00000567188 PIK3CAP42336 1068 aa6.27□□□□□ -1.41
CNOT1-211ENST00000567188 DR1Q01658 176 aa6.27□□□□□ -1.41
CNOT1-211ENST00000567188 MAPRE2Q15555 327 aa6.27□□□□□ -1.41
CNOT1-211ENST00000567188 HERC4Q5GLZ8 1057 aaPredicted RBP6.27□□□□□ -1.41
CNOT1-211ENST00000567188 NFRKBQ6P4R8 1299 aa6.27□□□□□ -1.41
CNOT1-211ENST00000567188 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.27□□□□□ -1.41
CNOT1-211ENST00000567188 ST7Q9NRC1 585 aa6.27□□□□□ -1.41
CNOT1-211ENST00000567188 ADD3Q9UEY8 706 aaKnown RBP6.27□□□□□ -1.41
CNOT1-211ENST00000567188 L1RE1Q9UN81 338 aa6.27□□□□□ -1.41
CNOT1-211ENST00000567188 IDH3BO43837 385 aa6.27□□□□□ -1.41
CNOT1-211ENST00000567188 IFNAR1P17181 557 aa6.27□□□□□ -1.41
CNOT1-211ENST00000567188 HOXA10P31260 410 aaPredicted RBP6.27□□□□□ -1.41
CNOT1-211ENST00000567188 COPB1P53618 953 aaKnown RBP6.27□□□□□ -1.41
CNOT1-211ENST00000567188 CCZ1BP86790 482 aa6.27□□□□□ -1.41
CNOT1-211ENST00000567188 CCZ1P86791 482 aaPredicted RBP6.27□□□□□ -1.41
CNOT1-211ENST00000567188 PURAQ00577 322 aaKnown RBP6.27□□□□□ -1.41
CNOT1-211ENST00000567188 TOGARAM2Q6ZUX3 1019 aa6.27□□□□□ -1.41
CNOT1-211ENST00000567188 ENGASEQ8NFI3 743 aa6.27□□□□□ -1.41
CNOT1-211ENST00000567188 GRPEL2Q8TAA5 225 aa6.27□□□□□ -1.41
CNOT1-211ENST00000567188 ITPKCQ96DU7 683 aa6.27□□□□□ -1.41
CNOT1-211ENST00000567188 L3MBTL3Q96JM7 780 aaPredicted RBP6.27□□□□□ -1.41
CNOT1-211ENST00000567188 PXMP2Q9NR77 195 aa6.27□□□□□ -1.41
CNOT1-211ENST00000567188 ZSCAN32Q9NX65 697 aa6.27□□□□□ -1.41
CNOT1-211ENST00000567188 SRPRBQ9Y5M8 271 aaKnown RBP6.27□□□□□ -1.41
CNOT1-211ENST00000567188 RBM47A0AV96 593 aaKnown RBP6.27□□□□□ -1.41
CNOT1-211ENST00000567188 FOXN1O15353 648 aa6.27□□□□□ -1.41
CNOT1-211ENST00000567188 NDUFA10O95299 355 aa6.27□□□□□ -1.41
CNOT1-211ENST00000567188 PRLP01236 227 aa6.27□□□□□ -1.41
CNOT1-211ENST00000567188 PYGLP06737 847 aa6.27□□□□□ -1.41
CNOT1-211ENST00000567188 C6orf222P0C671 652 aaPredicted RBP6.27□□□□□ -1.41
CNOT1-211ENST00000567188 ACTN1P12814 892 aa6.27□□□□□ -1.41
CNOT1-211ENST00000567188 PGM1P36871 562 aa6.27□□□□□ -1.41
CNOT1-211ENST00000567188 HIRAP54198 1017 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms