RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 CXorf38Q8TB03 319 aa17.99■□□□□ 0.47
CLN6-208ENST00000567060 SLC35C1Q96A29 364 aa17.99■□□□□ 0.47
CLN6-208ENST00000567060 SUSD3Q96L08 255 aa17.99■□□□□ 0.47
CLN6-208ENST00000567060 HERC2P3Q9BVR0 1158 aa17.99■□□□□ 0.47
CLN6-208ENST00000567060 OXCT2Q9BYC2 517 aaPredicted RBP17.99■□□□□ 0.47
CLN6-208ENST00000567060 VRTNQ9H8Y1 702 aa17.99■□□□□ 0.47
CLN6-208ENST00000567060 TLR9Q9NR96 1032 aa17.99■□□□□ 0.47
CLN6-208ENST00000567060 IRAK3Q9Y616 596 aa17.99■□□□□ 0.47
CLN6-208ENST00000567060 CACNA1HO95180 2353 aa17.99■□□□□ 0.47
CLN6-208ENST00000567060 NT5C1B-RDH14C9J2C7 533 aa17.98■□□□□ 0.47
CLN6-208ENST00000567060 M0QZQ0 153 aa17.98■□□□□ 0.47
CLN6-208ENST00000567060 PHACTR2O75167 634 aa17.98■□□□□ 0.47
CLN6-208ENST00000567060 ITGB3P05106 788 aa17.98■□□□□ 0.47
CLN6-208ENST00000567060 FAM163BP0C2L3 166 aa17.98■□□□□ 0.47
CLN6-208ENST00000567060 POLR2BP30876 1174 aaKnown RBP17.98■□□□□ 0.47
CLN6-208ENST00000567060 PTPN5P54829 565 aa17.98■□□□□ 0.47
CLN6-208ENST00000567060 LILRA4P59901 499 aa17.98■□□□□ 0.47
CLN6-208ENST00000567060 BIRC3Q13489 604 aa17.98■□□□□ 0.47
CLN6-208ENST00000567060 TRPC3Q13507 836 aa17.98■□□□□ 0.47
CLN6-208ENST00000567060 C1orf220Q5T0J3 134 aa17.98■□□□□ 0.47
CLN6-208ENST00000567060 TCERG1LQ5VWI1 586 aa17.98■□□□□ 0.47
CLN6-208ENST00000567060 LRSAM1Q6UWE0 723 aa17.98■□□□□ 0.47
CLN6-208ENST00000567060 SV2AQ7L0J3 742 aa17.98■□□□□ 0.47
CLN6-208ENST00000567060 RBM23Q86U06 439 aaKnown RBP17.98■□□□□ 0.47
CLN6-208ENST00000567060 ANKRD20A12PQ8NF67 263 aa17.98■□□□□ 0.47
CLN6-208ENST00000567060 POF1BQ8WVV4 589 aa17.98■□□□□ 0.47
CLN6-208ENST00000567060 ZNF516Q92618 1163 aa17.98■□□□□ 0.47
CLN6-208ENST00000567060 PPP2R3CQ969Q6 453 aa17.98■□□□□ 0.47
CLN6-208ENST00000567060 EEF2KMTQ96G04 330 aa17.98■□□□□ 0.47
CLN6-208ENST00000567060 CNOT6LQ96LI5 555 aaKnown RBP17.98■□□□□ 0.47
CLN6-208ENST00000567060 PAAF1Q9BRP4 392 aa17.98■□□□□ 0.47
CLN6-208ENST00000567060 DSEQ9UL01 958 aa17.98■□□□□ 0.47
CLN6-208ENST00000567060 AGAP1Q9UPQ3 857 aa17.98■□□□□ 0.47
CLN6-208ENST00000567060 PCDHGC5Q9Y5F6 944 aa17.98■□□□□ 0.47
CLN6-208ENST00000567060 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.98■□□□□ 0.47
CLN6-208ENST00000567060 PTPRJQ12913 1337 aa17.98■□□□□ 0.47
CLN6-208ENST00000567060 C1RP00736 705 aa17.97■□□□□ 0.47
CLN6-208ENST00000567060 CTSAP10619 480 aa17.97■□□□□ 0.47
CLN6-208ENST00000567060 TYMPP19971 482 aa17.97■□□□□ 0.47
CLN6-208ENST00000567060 PBX3P40426 434 aa17.97■□□□□ 0.47
CLN6-208ENST00000567060 NRIP1P48552 1158 aa17.97■□□□□ 0.47
CLN6-208ENST00000567060 MXI1P50539 228 aa17.97■□□□□ 0.47
CLN6-208ENST00000567060 ZNF445P59923 1031 aa17.97■□□□□ 0.47
CLN6-208ENST00000567060 DLG4P78352 724 aa17.97■□□□□ 0.47
CLN6-208ENST00000567060 SGSM1Q2NKQ1 1148 aa17.97■□□□□ 0.47
CLN6-208ENST00000567060 DCAF17Q5H9S7 520 aaPredicted RBP17.97■□□□□ 0.47
CLN6-208ENST00000567060 SMYD5Q6GMV2 418 aa17.97■□□□□ 0.47
CLN6-208ENST00000567060 DPH6Q7L8W6 267 aa17.97■□□□□ 0.47
CLN6-208ENST00000567060 TMEM173Q86WV6 379 aaPredicted RBP17.97■□□□□ 0.47
CLN6-208ENST00000567060 CCDC150Q8NCX0 1101 aa17.97■□□□□ 0.47
CLN6-208ENST00000567060 APPL2Q8NEU8 664 aa17.97■□□□□ 0.47
CLN6-208ENST00000567060 IMPG2Q9BZV3 1241 aa17.97■□□□□ 0.47
CLN6-208ENST00000567060 FAM124BQ9H5Z6 455 aaPredicted RBP17.97■□□□□ 0.47
CLN6-208ENST00000567060 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.97■□□□□ 0.47
CLN6-208ENST00000567060 CHST7Q9NS84 486 aa17.97■□□□□ 0.47
CLN6-208ENST00000567060 GDAP2Q9NXN4 497 aa17.97■□□□□ 0.47
CLN6-208ENST00000567060 SIX4Q9UIU6 781 aa17.97■□□□□ 0.47
CLN6-208ENST00000567060 BARX2Q9UMQ3 279 aaPredicted RBP17.97■□□□□ 0.47
CLN6-208ENST00000567060 COQ4Q9Y3A0 265 aa17.97■□□□□ 0.47
CLN6-208ENST00000567060 USP15Q9Y4E8 981 aaPredicted RBP17.97■□□□□ 0.47
CLN6-208ENST00000567060 PLXNA4Q9HCM2 1894 aa17.97■□□□□ 0.47
CLN6-208ENST00000567060 BECN2A8MW95 431 aa17.96■□□□□ 0.47
CLN6-208ENST00000567060 KPNA7A9QM74 516 aa17.96■□□□□ 0.47
CLN6-208ENST00000567060 FSCN2O14926 492 aa17.96■□□□□ 0.47
CLN6-208ENST00000567060 URODP06132 367 aa17.96■□□□□ 0.47
CLN6-208ENST00000567060 TPM2P07951 284 aa17.96■□□□□ 0.47
CLN6-208ENST00000567060 KRT19P08727 400 aa17.96■□□□□ 0.47
CLN6-208ENST00000567060 FGFR3P22607 806 aa17.96■□□□□ 0.47
CLN6-208ENST00000567060 TPM4P67936 248 aa17.96■□□□□ 0.47
CLN6-208ENST00000567060 RBM10P98175 930 aaKnown RBP17.96■□□□□ 0.47
CLN6-208ENST00000567060 DSG1Q02413 1049 aa17.96■□□□□ 0.47
CLN6-208ENST00000567060 PPP3CAQ08209 521 aa17.96■□□□□ 0.47
CLN6-208ENST00000567060 NCOA4Q13772 614 aa17.96■□□□□ 0.47
CLN6-208ENST00000567060 SMC1AQ14683 1233 aaKnown RBP17.96■□□□□ 0.47
CLN6-208ENST00000567060 MAN2A1Q16706 1144 aa17.96■□□□□ 0.47
CLN6-208ENST00000567060 CDKAL1Q5VV42 579 aa17.96■□□□□ 0.47
CLN6-208ENST00000567060 TDRD10Q5VZ19 366 aaKnown RBP17.96■□□□□ 0.47
CLN6-208ENST00000567060 LMBRD2Q68DH5 695 aaPredicted RBP17.96■□□□□ 0.47
CLN6-208ENST00000567060 CD300LGQ6UXG3 332 aa17.96■□□□□ 0.47
CLN6-208ENST00000567060 IRF2BP1Q8IU81 584 aa17.96■□□□□ 0.47
CLN6-208ENST00000567060 VPS52Q8N1B4 723 aa17.96■□□□□ 0.47
CLN6-208ENST00000567060 FBXL6Q8N531 539 aa17.96■□□□□ 0.47
CLN6-208ENST00000567060 C3orf58Q8NDZ4 430 aa17.96■□□□□ 0.47
CLN6-208ENST00000567060 FBXL13Q8NEE6 735 aa17.96■□□□□ 0.47
CLN6-208ENST00000567060 BCL7CQ8WUZ0 217 aaPredicted RBP17.96■□□□□ 0.47
CLN6-208ENST00000567060 TTPALQ9BTX7 342 aa17.96■□□□□ 0.47
CLN6-208ENST00000567060 ZBP1Q9H171 429 aa17.96■□□□□ 0.47
CLN6-208ENST00000567060 PCDHB8Q9UN66 801 aa17.96■□□□□ 0.47
CLN6-208ENST00000567060 VPS13AQ96RL7 3174 aa17.96■□□□□ 0.47
CLN6-208ENST00000567060 SCN1AP35498 2009 aa17.96■□□□□ 0.47
CLN6-208ENST00000567060 GTPBP10A4D1E9 387 aaKnown RBP17.95■□□□□ 0.46
CLN6-208ENST00000567060 TULP1O00294 542 aaPredicted RBP17.95■□□□□ 0.46
CLN6-208ENST00000567060 AFPP02771 609 aaKnown RBP17.95■□□□□ 0.46
CLN6-208ENST00000567060 CYP11A1P05108 521 aa17.95■□□□□ 0.46
CLN6-208ENST00000567060 TRIM49P0CI25 452 aa17.95■□□□□ 0.46
CLN6-208ENST00000567060 TRIM49CP0CI26 452 aa17.95■□□□□ 0.46
CLN6-208ENST00000567060 ODC1P11926 461 aa17.95■□□□□ 0.46
CLN6-208ENST00000567060 P4HA1P13674 534 aa17.95■□□□□ 0.46
CLN6-208ENST00000567060 MTIF2P46199 727 aaKnown RBP17.95■□□□□ 0.46
CLN6-208ENST00000567060 GCLMP48507 274 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms