RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 TSC2P49815 1807 aa16.87■□□□□ 0.29
PALB2-205ENST00000567003 SPECC1L-ADORA2AF8WAN1 911 aa16.87■□□□□ 0.29
PALB2-205ENST00000567003 M0QZQ0 153 aa16.87■□□□□ 0.29
PALB2-205ENST00000567003 CHADO15335 359 aa16.87■□□□□ 0.29
PALB2-205ENST00000567003 CTHP32929 405 aa16.87■□□□□ 0.29
PALB2-205ENST00000567003 TNFSF9P41273 254 aa16.87■□□□□ 0.29
PALB2-205ENST00000567003 MATR3P43243 847 aaKnown RBP eCLIP16.87■□□□□ 0.29
PALB2-205ENST00000567003 TOB1P50616 345 aaPredicted RBP16.87■□□□□ 0.29
PALB2-205ENST00000567003 FCHO2Q0JRZ9 810 aa16.87■□□□□ 0.29
PALB2-205ENST00000567003 PON2Q15165 354 aa16.87■□□□□ 0.29
PALB2-205ENST00000567003 CCDC6Q16204 474 aa16.87■□□□□ 0.29
PALB2-205ENST00000567003 CSRP2Q16527 193 aa16.87■□□□□ 0.29
PALB2-205ENST00000567003 LONP2Q86WA8 852 aa16.87■□□□□ 0.29
PALB2-205ENST00000567003 ARID3BQ8IVW6 561 aaPredicted RBP16.87■□□□□ 0.29
PALB2-205ENST00000567003 FAM160A2Q8N612 972 aaPredicted RBP16.87■□□□□ 0.29
PALB2-205ENST00000567003 ATAD1Q8NBU5 361 aa16.87■□□□□ 0.29
PALB2-205ENST00000567003 TMEM161BQ8NDZ6 487 aa16.87■□□□□ 0.29
PALB2-205ENST00000567003 KIF12Q96FN5 646 aa16.87■□□□□ 0.29
PALB2-205ENST00000567003 MMTAG2Q9BU76 263 aaKnown RBP16.87■□□□□ 0.29
PALB2-205ENST00000567003 MAFFQ9ULX9 164 aa16.87■□□□□ 0.29
PALB2-205ENST00000567003 RBM19Q9Y4C8 960 aaKnown RBP16.87■□□□□ 0.29
PALB2-205ENST00000567003 ATG2BQ96BY7 2078 aa16.87■□□□□ 0.29
PALB2-205ENST00000567003 SPAG17Q6Q759 2223 aa16.86■□□□□ 0.29
PALB2-205ENST00000567003 CEP295Q9C0D2 2601 aa16.86■□□□□ 0.29
PALB2-205ENST00000567003 FRYQ5TBA9 3013 aa16.86■□□□□ 0.29
PALB2-205ENST00000567003 LAMA1P25391 3075 aa16.86■□□□□ 0.29
PALB2-205ENST00000567003 MYBPHLA2RUH7 354 aa16.86■□□□□ 0.29
PALB2-205ENST00000567003 LRP3O75074 770 aa16.86■□□□□ 0.29
PALB2-205ENST00000567003 TOM1L1O75674 476 aa16.86■□□□□ 0.29
PALB2-205ENST00000567003 OAZ2O95190 189 aa16.86■□□□□ 0.29
PALB2-205ENST00000567003 PRAMEF12O95522 483 aa16.86■□□□□ 0.29
PALB2-205ENST00000567003 MAPTP10636 758 aaKnown RBP16.86■□□□□ 0.29
PALB2-205ENST00000567003 EPHB3P54753 998 aa16.86■□□□□ 0.29
PALB2-205ENST00000567003 TNK2Q07912 1038 aa16.86■□□□□ 0.29
PALB2-205ENST00000567003 STRN3Q13033 797 aa16.86■□□□□ 0.29
PALB2-205ENST00000567003 PKN3Q6P5Z2 889 aa16.86■□□□□ 0.29
PALB2-205ENST00000567003 GAREM2Q75VX8 874 aa16.86■□□□□ 0.29
PALB2-205ENST00000567003 CEP68Q76N32 757 aa16.86■□□□□ 0.29
PALB2-205ENST00000567003 FBXO18Q8NFZ0 1043 aa16.86■□□□□ 0.29
PALB2-205ENST00000567003 PLIN2Q99541 437 aa16.86■□□□□ 0.29
PALB2-205ENST00000567003 C8orf33Q9H7E9 229 aaPredicted RBP16.86■□□□□ 0.29
PALB2-205ENST00000567003 NOL7Q9UMY1 257 aaKnown RBP16.86■□□□□ 0.29
PALB2-205ENST00000567003 NPHP3-ACAD11A0A0J9YXS1 232 aa16.85■□□□□ 0.29
PALB2-205ENST00000567003 MTMR11A4FU01 709 aa16.85■□□□□ 0.29
PALB2-205ENST00000567003 PAPSS2O95340 614 aaPredicted RBP16.85■□□□□ 0.29
PALB2-205ENST00000567003 GABRR2P28476 465 aa16.85■□□□□ 0.29
PALB2-205ENST00000567003 TRAPPC10P48553 1259 aa16.85■□□□□ 0.29
PALB2-205ENST00000567003 PXNP49023 591 aaPredicted RBP16.85■□□□□ 0.29
PALB2-205ENST00000567003 AARSP49588 968 aaKnown RBP eCLIP16.85■□□□□ 0.29
PALB2-205ENST00000567003 CYP4F8P98187 520 aa16.85■□□□□ 0.29
PALB2-205ENST00000567003 MCL1Q07820 350 aa16.85■□□□□ 0.29
PALB2-205ENST00000567003 PLD1Q13393 1074 aa16.85■□□□□ 0.29
PALB2-205ENST00000567003 PDIA5Q14554 519 aa16.85■□□□□ 0.29
PALB2-205ENST00000567003 SF3A2Q15428 464 aaKnown RBP16.85■□□□□ 0.29
PALB2-205ENST00000567003 GPR158Q5T848 1215 aa16.85■□□□□ 0.29
PALB2-205ENST00000567003 KRT79Q5XKE5 535 aa16.85■□□□□ 0.29
PALB2-205ENST00000567003 CENPPQ6IPU0 288 aa16.85■□□□□ 0.29
PALB2-205ENST00000567003 DSTYKQ6XUX3 929 aa16.85■□□□□ 0.29
PALB2-205ENST00000567003 USP37Q86T82 979 aa16.85■□□□□ 0.29
PALB2-205ENST00000567003 FAM200AQ8TCP9 573 aa16.85■□□□□ 0.29
PALB2-205ENST00000567003 E2F7Q96AV8 911 aa16.85■□□□□ 0.29
PALB2-205ENST00000567003 LPIN3Q9BQK8 851 aa16.85■□□□□ 0.29
PALB2-205ENST00000567003 GPR88Q9GZN0 384 aa16.85■□□□□ 0.29
PALB2-205ENST00000567003 SMG9Q9H0W8 520 aaKnown RBP16.85■□□□□ 0.29
PALB2-205ENST00000567003 ATXN3LQ9H3M9 355 aa16.85■□□□□ 0.29
PALB2-205ENST00000567003 DAXXQ9UER7 740 aaPredicted RBP16.85■□□□□ 0.29
PALB2-205ENST00000567003 GREB1Q4ZG55 1949 aa16.85■□□□□ 0.29
PALB2-205ENST00000567003 TTC26A0AVF1 554 aa16.84■□□□□ 0.29
PALB2-205ENST00000567003 OR6C75A6NL08 312 aa16.84■□□□□ 0.29
PALB2-205ENST00000567003 LACTBL1A8MY62 500 aa16.84■□□□□ 0.29
PALB2-205ENST00000567003 CLDN3O15551 220 aa16.84■□□□□ 0.29
PALB2-205ENST00000567003 EXTL3O43909 919 aa16.84■□□□□ 0.29
PALB2-205ENST00000567003 PLS3P13797 630 aa16.84■□□□□ 0.29
PALB2-205ENST00000567003 GUCY2CP25092 1073 aa16.84■□□□□ 0.29
PALB2-205ENST00000567003 LRPAP1P30533 357 aa16.84■□□□□ 0.29
PALB2-205ENST00000567003 ALDH1A3P47895 512 aa16.84■□□□□ 0.29
PALB2-205ENST00000567003 MLLT6P55198 1093 aaPredicted RBP16.84■□□□□ 0.29
PALB2-205ENST00000567003 GPR17Q13304 367 aa16.84■□□□□ 0.29
PALB2-205ENST00000567003 ZBTB6Q15916 424 aa16.84■□□□□ 0.29
PALB2-205ENST00000567003 OVOS1Q6IE37 1185 aa16.84■□□□□ 0.29
PALB2-205ENST00000567003 DNAJB7Q7Z6W7 309 aaPredicted RBP16.84■□□□□ 0.29
PALB2-205ENST00000567003 SPIRE2Q8WWL2 714 aa16.84■□□□□ 0.29
PALB2-205ENST00000567003 BICD1Q96G01 975 aa16.84■□□□□ 0.29
PALB2-205ENST00000567003 MSANTD3Q96H12 275 aa16.84■□□□□ 0.29
PALB2-205ENST00000567003 CHAMP1Q96JM3 812 aa16.84■□□□□ 0.29
PALB2-205ENST00000567003 PNMA5Q96PV4 448 aa16.84■□□□□ 0.29
PALB2-205ENST00000567003 RXFP3Q9NSD7 469 aa16.84■□□□□ 0.29
PALB2-205ENST00000567003 POLR3BQ9NW08 1133 aaPredicted RBP16.84■□□□□ 0.29
PALB2-205ENST00000567003 DPYSL4O14531 572 aa16.83■□□□□ 0.28
PALB2-205ENST00000567003 AXIN1O15169 862 aa16.83■□□□□ 0.28
PALB2-205ENST00000567003 CACNA1GO43497 2377 aa16.83■□□□□ 0.28
PALB2-205ENST00000567003 CLTAP09496 248 aa16.83■□□□□ 0.28
PALB2-205ENST00000567003 CCINQ13939 588 aa16.83■□□□□ 0.28
PALB2-205ENST00000567003 AASDHQ4L235 1098 aaPredicted RBP16.83■□□□□ 0.28
PALB2-205ENST00000567003 DGKKQ5KSL6 1271 aa16.83■□□□□ 0.28
PALB2-205ENST00000567003 WDR5BQ86VZ2 330 aa16.83■□□□□ 0.28
PALB2-205ENST00000567003 RALGPS2Q86X27 583 aaPredicted RBP16.83■□□□□ 0.28
PALB2-205ENST00000567003 OR10T2Q8NGX3 314 aa16.83■□□□□ 0.28
PALB2-205ENST00000567003 PSMG2Q969U7 264 aa16.83■□□□□ 0.28
PALB2-205ENST00000567003 NTPCRQ9BSD7 190 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms