RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 ELAVL2Q12926 359 aaKnown RBP12.34□□□□□ -0.43
KARS-207ENST00000566560 MYO1EQ12965 1108 aa12.34□□□□□ -0.43
KARS-207ENST00000566560 HABP4Q5JVS0 413 aaKnown RBP12.34□□□□□ -0.43
KARS-207ENST00000566560 NUDT18Q6ZVK8 323 aa12.34□□□□□ -0.43
KARS-207ENST00000566560 CCDC150Q8NCX0 1101 aa12.34□□□□□ -0.43
KARS-207ENST00000566560 FBXL13Q8NEE6 735 aa12.34□□□□□ -0.43
KARS-207ENST00000566560 HPDLQ96IR7 371 aa12.34□□□□□ -0.43
KARS-207ENST00000566560 HERC2P3Q9BVR0 1158 aa12.34□□□□□ -0.43
KARS-207ENST00000566560 EPOPA6NHQ4 379 aa12.33□□□□□ -0.44
KARS-207ENST00000566560 C3orf80F5H4A9 247 aa12.33□□□□□ -0.44
KARS-207ENST00000566560 I3L4J1 428 aa12.33□□□□□ -0.44
KARS-207ENST00000566560 SPTLC1O15269 473 aa12.33□□□□□ -0.44
KARS-207ENST00000566560 P4HA2O15460 535 aa12.33□□□□□ -0.44
KARS-207ENST00000566560 TRAPPC3O43617 180 aa12.33□□□□□ -0.44
KARS-207ENST00000566560 IGFBP6P24592 240 aaPredicted RBP12.33□□□□□ -0.44
KARS-207ENST00000566560 ATICP31939 592 aa12.33□□□□□ -0.44
KARS-207ENST00000566560 AARSP49588 968 aaKnown RBP eCLIP12.33□□□□□ -0.44
KARS-207ENST00000566560 COPB1P53618 953 aaKnown RBP12.33□□□□□ -0.44
KARS-207ENST00000566560 LILRA4P59901 499 aa12.33□□□□□ -0.44
KARS-207ENST00000566560 NOP14P78316 857 aaKnown RBP12.33□□□□□ -0.44
KARS-207ENST00000566560 UBE3AQ05086 875 aa12.33□□□□□ -0.44
KARS-207ENST00000566560 CETN1Q12798 172 aa12.33□□□□□ -0.44
KARS-207ENST00000566560 GPM6BQ13491 265 aa12.33□□□□□ -0.44
KARS-207ENST00000566560 VWA3BQ502W6 1294 aa12.33□□□□□ -0.44
KARS-207ENST00000566560 TIGD5Q53EQ6 642 aa12.33□□□□□ -0.44
KARS-207ENST00000566560 MIIPQ5JXC2 388 aa12.33□□□□□ -0.44
KARS-207ENST00000566560 SCARA3Q6AZY7 606 aa12.33□□□□□ -0.44
KARS-207ENST00000566560 ADGRD1Q6QNK2 874 aa12.33□□□□□ -0.44
KARS-207ENST00000566560 CD300LGQ6UXG3 332 aa12.33□□□□□ -0.44
KARS-207ENST00000566560 DSTYKQ6XUX3 929 aa12.33□□□□□ -0.44
KARS-207ENST00000566560 DDX53Q86TM3 631 aaKnown RBP12.33□□□□□ -0.44
KARS-207ENST00000566560 SUSD3Q96L08 255 aa12.33□□□□□ -0.44
KARS-207ENST00000566560 VN1R3Q9BXE9 311 aa12.33□□□□□ -0.44
KARS-207ENST00000566560 TTYH1Q9H313 450 aaPredicted RBP12.33□□□□□ -0.44
KARS-207ENST00000566560 NDST4Q9H3R1 872 aa12.33□□□□□ -0.44
KARS-207ENST00000566560 ALG13Q9NP73 1137 aaKnown RBP12.33□□□□□ -0.44
KARS-207ENST00000566560 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.33□□□□□ -0.44
KARS-207ENST00000566560 GCNT4Q9P109 453 aa12.33□□□□□ -0.44
KARS-207ENST00000566560 STK39Q9UEW8 545 aa12.33□□□□□ -0.44
KARS-207ENST00000566560 LIMA1Q9UHB6 759 aaKnown RBP12.33□□□□□ -0.44
KARS-207ENST00000566560 LZTS1Q9Y250 596 aa12.33□□□□□ -0.44
KARS-207ENST00000566560 MYO7AQ13402 2215 aa12.32□□□□□ -0.44
KARS-207ENST00000566560 ARHGEF37A1IGU5 675 aa12.32□□□□□ -0.44
KARS-207ENST00000566560 KPNA7A9QM74 516 aa12.32□□□□□ -0.44
KARS-207ENST00000566560 H3BNC9 293 aa12.32□□□□□ -0.44
KARS-207ENST00000566560 STAU1O95793 577 aaKnown RBP12.32□□□□□ -0.44
KARS-207ENST00000566560 ASS1P00966 412 aaKnown RBP12.32□□□□□ -0.44
KARS-207ENST00000566560 CST3P01034 146 aaPredicted RBP12.32□□□□□ -0.44
KARS-207ENST00000566560 SOD2P04179 222 aa12.32□□□□□ -0.44
KARS-207ENST00000566560 URODP06132 367 aa12.32□□□□□ -0.44
KARS-207ENST00000566560 ODC1P11926 461 aa12.32□□□□□ -0.44
KARS-207ENST00000566560 PAX3P23760 479 aa12.32□□□□□ -0.44
KARS-207ENST00000566560 TNNC1P63316 161 aa12.32□□□□□ -0.44
KARS-207ENST00000566560 ZNF667Q5HYK9 610 aa12.32□□□□□ -0.44
KARS-207ENST00000566560 FAM171A1Q5VUB5 890 aa12.32□□□□□ -0.44
KARS-207ENST00000566560 SCARA5Q6ZMJ2 495 aa12.32□□□□□ -0.44
KARS-207ENST00000566560 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.32□□□□□ -0.44
KARS-207ENST00000566560 RNF168Q8IYW5 571 aaPredicted RBP12.32□□□□□ -0.44
KARS-207ENST00000566560 VPS52Q8N1B4 723 aa12.32□□□□□ -0.44
KARS-207ENST00000566560 POF1BQ8WVV4 589 aa12.32□□□□□ -0.44
KARS-207ENST00000566560 TAF4BQ92750 862 aa12.32□□□□□ -0.44
KARS-207ENST00000566560 B3GALT6Q96L58 329 aa12.32□□□□□ -0.44
KARS-207ENST00000566560 PI4K2AQ9BTU6 479 aa12.32□□□□□ -0.44
KARS-207ENST00000566560 KRTAP3-3Q9BYR6 98 aa12.32□□□□□ -0.44
KARS-207ENST00000566560 KRTAP3-2Q9BYR7 98 aa12.32□□□□□ -0.44
KARS-207ENST00000566560 GPR62Q9BZJ7 368 aa12.32□□□□□ -0.44
KARS-207ENST00000566560 XYLT2Q9H1B5 865 aa12.32□□□□□ -0.44
KARS-207ENST00000566560 VPS16Q9H269 839 aa12.32□□□□□ -0.44
KARS-207ENST00000566560 ENTPD7Q9NQZ7 604 aa12.32□□□□□ -0.44
KARS-207ENST00000566560 TLR9Q9NR96 1032 aa12.32□□□□□ -0.44
KARS-207ENST00000566560 RAB20Q9NX57 234 aa12.32□□□□□ -0.44
KARS-207ENST00000566560 PUF60Q9UHX1 559 aaKnown RBP12.32□□□□□ -0.44
KARS-207ENST00000566560 COQ4Q9Y3A0 265 aa12.32□□□□□ -0.44
KARS-207ENST00000566560 SNX9Q9Y5X1 595 aa12.32□□□□□ -0.44
KARS-207ENST00000566560 LGALS16A8MUM7 142 aa12.31□□□□□ -0.44
KARS-207ENST00000566560 BHMG1C9JSJ3 638 aaPredicted RBP12.31□□□□□ -0.44
KARS-207ENST00000566560 M0QZQ0 153 aa12.31□□□□□ -0.44
KARS-207ENST00000566560 SYN3O14994 580 aa12.31□□□□□ -0.44
KARS-207ENST00000566560 GRM6O15303 877 aa12.31□□□□□ -0.44
KARS-207ENST00000566560 PMM2O15305 246 aa12.31□□□□□ -0.44
KARS-207ENST00000566560 SERPINC1P01008 464 aa12.31□□□□□ -0.44
KARS-207ENST00000566560 TKTP29401 623 aaKnown RBP12.31□□□□□ -0.44
KARS-207ENST00000566560 CA8P35219 290 aa12.31□□□□□ -0.44
KARS-207ENST00000566560 GLUD2P49448 558 aa12.31□□□□□ -0.44
KARS-207ENST00000566560 SGSM1Q2NKQ1 1148 aa12.31□□□□□ -0.44
KARS-207ENST00000566560 USP41Q3LFD5 358 aa12.31□□□□□ -0.44
KARS-207ENST00000566560 WDR72Q3MJ13 1102 aa12.31□□□□□ -0.44
KARS-207ENST00000566560 FKBP15Q5T1M5 1219 aa12.31□□□□□ -0.44
KARS-207ENST00000566560 SPOPLQ6IQ16 392 aa12.31□□□□□ -0.44
KARS-207ENST00000566560 KIAA1841Q6NSI8 718 aa12.31□□□□□ -0.44
KARS-207ENST00000566560 CEP57Q86XR8 500 aa12.31□□□□□ -0.44
KARS-207ENST00000566560 SPPL3Q8TCT6 385 aa12.31□□□□□ -0.44
KARS-207ENST00000566560 SEMA4DQ92854 862 aa12.31□□□□□ -0.44
KARS-207ENST00000566560 ELMO3Q96BJ8 720 aa12.31□□□□□ -0.44
KARS-207ENST00000566560 SENP8Q96LD8 212 aa12.31□□□□□ -0.44
KARS-207ENST00000566560 PHOX2BQ99453 314 aa12.31□□□□□ -0.44
KARS-207ENST00000566560 TCF25Q9BQ70 676 aa12.31□□□□□ -0.44
KARS-207ENST00000566560 CRACR2AQ9BSW2 395 aa12.31□□□□□ -0.44
KARS-207ENST00000566560 TTPALQ9BTX7 342 aa12.31□□□□□ -0.44
KARS-207ENST00000566560 NIF3L1Q9GZT8 377 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms