RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 RWDD2AQ9UIY3 292 aa22.67■■□□□ 1.22
SHCBP1-205ENST00000566016 CYB561D2O14569 222 aa22.66■■□□□ 1.22
SHCBP1-205ENST00000566016 C4BPAP04003 597 aaKnown RBP22.66■■□□□ 1.22
SHCBP1-205ENST00000566016 EPCAMP16422 314 aa22.66■■□□□ 1.22
SHCBP1-205ENST00000566016 GTF2H1P32780 548 aa22.66■■□□□ 1.22
SHCBP1-205ENST00000566016 TFF2Q03403 129 aa22.66■■□□□ 1.22
SHCBP1-205ENST00000566016 PUS10Q3MIT2 529 aaKnown RBP22.66■■□□□ 1.22
SHCBP1-205ENST00000566016 CCDC183Q5T5S1 534 aa22.66■■□□□ 1.22
SHCBP1-205ENST00000566016 OVOS1Q6IE37 1185 aa22.66■■□□□ 1.22
SHCBP1-205ENST00000566016 ANKRD54Q6NXT1 300 aa22.66■■□□□ 1.22
SHCBP1-205ENST00000566016 LLGL2Q6P1M3 1020 aa22.66■■□□□ 1.22
SHCBP1-205ENST00000566016 C15orf39Q6ZRI6 1047 aa22.66■■□□□ 1.22
SHCBP1-205ENST00000566016 HPDLQ96IR7 371 aa22.66■■□□□ 1.22
SHCBP1-205ENST00000566016 PLEKHA4Q9H4M7 779 aa22.66■■□□□ 1.22
SHCBP1-205ENST00000566016 VRTNQ9H8Y1 702 aa22.66■■□□□ 1.22
SHCBP1-205ENST00000566016 DACH1Q9UI36 760 aa22.66■■□□□ 1.22
SHCBP1-205ENST00000566016 FBXL5Q9UKA1 691 aa22.66■■□□□ 1.22
SHCBP1-205ENST00000566016 CDY1Q9Y6F8 540 aa22.66■■□□□ 1.22
SHCBP1-205ENST00000566016 H3BQ06 376 aaPredicted RBP22.66■■□□□ 1.22
SHCBP1-205ENST00000566016 TGM5O43548 720 aa22.66■■□□□ 1.22
SHCBP1-205ENST00000566016 PTMSP20962 102 aa22.66■■□□□ 1.22
SHCBP1-205ENST00000566016 ATICP31939 592 aa22.66■■□□□ 1.22
SHCBP1-205ENST00000566016 OR1D2P34982 312 aa22.66■■□□□ 1.22
SHCBP1-205ENST00000566016 CTXN3Q4LDR2 81 aa22.66■■□□□ 1.22
SHCBP1-205ENST00000566016 CT47A1Q5JQC4 288 aaPredicted RBP22.66■■□□□ 1.22
SHCBP1-205ENST00000566016 SCARA3Q6AZY7 606 aa22.66■■□□□ 1.22
SHCBP1-205ENST00000566016 RSPO2Q6UXX9 243 aaPredicted RBP22.66■■□□□ 1.22
SHCBP1-205ENST00000566016 FILIP1Q7Z7B0 1213 aa22.66■■□□□ 1.22
SHCBP1-205ENST00000566016 METTL14Q9HCE5 456 aaKnown RBP22.66■■□□□ 1.22
SHCBP1-205ENST00000566016 CD207Q9UJ71 328 aa22.66■■□□□ 1.22
SHCBP1-205ENST00000566016 C2orf16Q68DN1 1984 aa22.65■■□□□ 1.22
SHCBP1-205ENST00000566016 OR6C75A6NL08 312 aa22.65■■□□□ 1.22
SHCBP1-205ENST00000566016 ADAM12O43184 909 aa22.65■■□□□ 1.22
SHCBP1-205ENST00000566016 STX10O60499 249 aa22.65■■□□□ 1.22
SHCBP1-205ENST00000566016 PAPLNO95428 1278 aa22.65■■□□□ 1.22
SHCBP1-205ENST00000566016 CST3P01034 146 aaPredicted RBP22.65■■□□□ 1.22
SHCBP1-205ENST00000566016 NLRP12P59046 1061 aa22.65■■□□□ 1.22
SHCBP1-205ENST00000566016 BIRC3Q13489 604 aa22.65■■□□□ 1.22
SHCBP1-205ENST00000566016 TRPC3Q13507 836 aa22.65■■□□□ 1.22
SHCBP1-205ENST00000566016 DPCR1Q3MIW9 517 aa22.65■■□□□ 1.22
SHCBP1-205ENST00000566016 SV2AQ7L0J3 742 aa22.65■■□□□ 1.22
SHCBP1-205ENST00000566016 RTL10Q7L3V2 364 aa22.65■■□□□ 1.22
SHCBP1-205ENST00000566016 DPH6Q7L8W6 267 aa22.65■■□□□ 1.22
SHCBP1-205ENST00000566016 LIMS2Q7Z4I7 341 aa22.65■■□□□ 1.22
SHCBP1-205ENST00000566016 TMEM86AQ8N2M4 240 aa22.65■■□□□ 1.22
SHCBP1-205ENST00000566016 TOP6BLQ8N6T0 577 aa22.65■■□□□ 1.22
SHCBP1-205ENST00000566016 SYAP1Q96A49 352 aaPredicted RBP22.65■■□□□ 1.22
SHCBP1-205ENST00000566016 ASB2Q96Q27 587 aa22.65■■□□□ 1.22
SHCBP1-205ENST00000566016 XYLT2Q9H1B5 865 aa22.65■■□□□ 1.22
SHCBP1-205ENST00000566016 MAN1C1Q9NR34 630 aa22.65■■□□□ 1.22
SHCBP1-205ENST00000566016 ARMCX3Q9UH62 379 aaPredicted RBP22.65■■□□□ 1.22
SHCBP1-205ENST00000566016 FBXW11Q9UKB1 542 aa22.65■■□□□ 1.22
SHCBP1-205ENST00000566016 TIMM13Q9Y5L4 95 aaPredicted RBP22.65■■□□□ 1.22
SHCBP1-205ENST00000566016 HUS1O60921 280 aa22.64■■□□□ 1.21
SHCBP1-205ENST00000566016 PHACTR2O75167 634 aa22.64■■□□□ 1.21
SHCBP1-205ENST00000566016 ERCC5P28715 1186 aaPredicted RBP22.64■■□□□ 1.21
SHCBP1-205ENST00000566016 ROR1Q01973 937 aa22.64■■□□□ 1.21
SHCBP1-205ENST00000566016 SMAD4Q13485 552 aaKnown RBP22.64■■□□□ 1.21
SHCBP1-205ENST00000566016 NCOA4Q13772 614 aa22.64■■□□□ 1.21
SHCBP1-205ENST00000566016 SYCE2Q6PIF2 218 aa22.64■■□□□ 1.21
SHCBP1-205ENST00000566016 FRMD5Q7Z6J6 570 aa22.64■■□□□ 1.21
SHCBP1-205ENST00000566016 METTL23Q86XA0 190 aa22.64■■□□□ 1.21
SHCBP1-205ENST00000566016 PALB2Q86YC2 1186 aa22.64■■□□□ 1.21
SHCBP1-205ENST00000566016 GLYCTKQ8IVS8 523 aa22.64■■□□□ 1.21
SHCBP1-205ENST00000566016 ZNF461Q8TAF7 563 aa22.64■■□□□ 1.21
SHCBP1-205ENST00000566016 SFXN1Q9H9B4 322 aa22.64■■□□□ 1.21
SHCBP1-205ENST00000566016 MAFFQ9ULX9 164 aa22.64■■□□□ 1.21
SHCBP1-205ENST00000566016 SNX9Q9Y5X1 595 aa22.64■■□□□ 1.21
SHCBP1-205ENST00000566016 ABLIM3O94929 683 aa22.63■■□□□ 1.21
SHCBP1-205ENST00000566016 FGFR1OPO95684 399 aaKnown RBP22.63■■□□□ 1.21
SHCBP1-205ENST00000566016 GNA14O95837 355 aa22.63■■□□□ 1.21
SHCBP1-205ENST00000566016 TRIM49P0CI25 452 aa22.63■■□□□ 1.21
SHCBP1-205ENST00000566016 TRIM49CP0CI26 452 aa22.63■■□□□ 1.21
SHCBP1-205ENST00000566016 MARSP56192 900 aaKnown RBP22.63■■□□□ 1.21
SHCBP1-205ENST00000566016 ITIH3Q06033 890 aa22.63■■□□□ 1.21
SHCBP1-205ENST00000566016 PPP3CAQ08209 521 aa22.63■■□□□ 1.21
SHCBP1-205ENST00000566016 WSCD1Q658N2 575 aa22.63■■□□□ 1.21
SHCBP1-205ENST00000566016 TPGS2Q68CL5 300 aa22.63■■□□□ 1.21
SHCBP1-205ENST00000566016 PDCL2Q8N4E4 241 aa22.63■■□□□ 1.21
SHCBP1-205ENST00000566016 CMASQ8NFW8 434 aaPredicted RBP22.63■■□□□ 1.21
SHCBP1-205ENST00000566016 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.63■■□□□ 1.21
SHCBP1-205ENST00000566016 RHOBTB2Q9BYZ6 727 aa22.63■■□□□ 1.21
SHCBP1-205ENST00000566016 TMEM8AQ9HCN3 771 aa22.63■■□□□ 1.21
SHCBP1-205ENST00000566016 L1RE1Q9UN81 338 aa22.63■■□□□ 1.21
SHCBP1-205ENST00000566016 FAM50BQ9Y247 325 aa22.63■■□□□ 1.21
SHCBP1-205ENST00000566016 DENND4AQ7Z401 1863 aa22.62■■□□□ 1.21
SHCBP1-205ENST00000566016 VNN1O95497 513 aa22.62■■□□□ 1.21
SHCBP1-205ENST00000566016 STX17P56962 302 aa22.62■■□□□ 1.21
SHCBP1-205ENST00000566016 KREMEN2Q8NCW0 462 aa22.62■■□□□ 1.21
SHCBP1-205ENST00000566016 TAF4BQ92750 862 aa22.62■■□□□ 1.21
SHCBP1-205ENST00000566016 S1PR5Q9H228 398 aa22.62■■□□□ 1.21
SHCBP1-205ENST00000566016 ZDHHC7Q9NXF8 308 aa22.62■■□□□ 1.21
SHCBP1-205ENST00000566016 WDR27A2RRH5 827 aa22.61■■□□□ 1.21
SHCBP1-205ENST00000566016 FAM163BP0C2L3 166 aa22.61■■□□□ 1.21
SHCBP1-205ENST00000566016 HOXA9P31269 272 aa22.61■■□□□ 1.21
SHCBP1-205ENST00000566016 GCLMP48507 274 aa22.61■■□□□ 1.21
SHCBP1-205ENST00000566016 MYL6P60660 151 aa22.61■■□□□ 1.21
SHCBP1-205ENST00000566016 SOWAHAQ2M3V2 549 aa22.61■■□□□ 1.21
SHCBP1-205ENST00000566016 KLHL40Q2TBA0 621 aa22.61■■□□□ 1.21
SHCBP1-205ENST00000566016 KRT39Q6A163 491 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms