RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 GDF6Q6KF10 455 aaPredicted RBP6.67□□□□□ -1.34
CHD9-217ENST00000565832 LLGL2Q6P1M3 1020 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 TMEM270Q6UE05 265 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 SCARA5Q6ZMJ2 495 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 SIX5Q8N196 739 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 SLC35G2Q8TBE7 412 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 DDX1Q92499 740 aaKnown RBP6.67□□□□□ -1.34
CHD9-217ENST00000565832 CLP1Q92989 425 aaKnown RBP6.67□□□□□ -1.34
CHD9-217ENST00000565832 MS4A14Q96JA4 679 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 MMS19Q96T76 1030 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 TLR10Q9BXR5 811 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 RPF1Q9H9Y2 349 aaKnown RBP6.67□□□□□ -1.34
CHD9-217ENST00000565832 SNTG2Q9NY99 539 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 MYO1AQ9UBC5 1043 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 NXF1Q9UBU9 619 aaKnown RBP6.67□□□□□ -1.34
CHD9-217ENST00000565832 SIX4Q9UIU6 781 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 CDC23Q9UJX2 597 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 POLIQ9UNA4 740 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 COG5Q9UP83 839 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 PCDHGA11Q9Y5H2 935 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 COL1A2P08123 1366 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 SCN1AP35498 2009 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 GRIN2DO15399 1336 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 CITO14578 2027 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 C17orf102A2RUQ5 167 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 GRID2IPA4D2P6 1211 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 KIAA0391O15091 583 aaKnown RBP6.67□□□□□ -1.34
CHD9-217ENST00000565832 NPTXRO95502 500 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 ALDH1A1P00352 501 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 ASGR1P07306 291 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 CTSHP09668 335 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 H2AFZP0C0S5 128 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 SCP2P22307 547 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 EIF4BP23588 611 aaKnown RBP6.67□□□□□ -1.34
CHD9-217ENST00000565832 IGFBP6P24592 240 aaPredicted RBP6.67□□□□□ -1.34
CHD9-217ENST00000565832 VARSP26640 1264 aaKnown RBP6.67□□□□□ -1.34
CHD9-217ENST00000565832 RAP1GAPP47736 663 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 GJA9P57773 515 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 MRPS25P82663 173 aaKnown RBP6.67□□□□□ -1.34
CHD9-217ENST00000565832 USP4Q13107 963 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 CUL2Q13617 745 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 FAM187BQ17R55 369 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 FAM47CQ5HY64 1035 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 GLRA4Q5JXX5 417 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 H2AFVQ71UI9 128 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 VASH1Q7L8A9 365 aaPredicted RBP6.67□□□□□ -1.34
CHD9-217ENST00000565832 CATSPER4Q7RTX7 472 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 CPNE8Q86YQ8 564 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 WDR49Q8IV35 697 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 PASD1Q8IV76 773 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 C1orf127Q8N9H9 656 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 TPCN2Q8NHX9 752 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 CPA5Q8WXQ8 436 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 ZMAT2Q96NC0 199 aaKnown RBP6.67□□□□□ -1.34
CHD9-217ENST00000565832 NOX5Q96PH1 765 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 APOL6Q9BWW8 343 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 TSGA10Q9BZW7 698 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 XYLT2Q9H1B5 865 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 NXF3Q9H4D5 531 aaKnown RBP6.67□□□□□ -1.34
CHD9-217ENST00000565832 XPNPEP3Q9NQH7 507 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 C1orf112Q9NSG2 853 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 KLK14Q9P0G3 267 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 Q9Y3F1 56 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 SAR1BQ9Y6B6 198 aa6.67□□□□□ -1.34
CHD9-217ENST00000565832 SMIM35A0A1B0GVV1 85 aa6.66□□□□□ -1.34
CHD9-217ENST00000565832 MEIS3P2A8K0S8 358 aa6.66□□□□□ -1.34
CHD9-217ENST00000565832 DYNC1I1O14576 645 aa6.66□□□□□ -1.34
CHD9-217ENST00000565832 SEPT4O43236 478 aa6.66□□□□□ -1.34
CHD9-217ENST00000565832 B4GALT4O60513 344 aa6.66□□□□□ -1.34
CHD9-217ENST00000565832 TACC1O75410 805 aa6.66□□□□□ -1.34
CHD9-217ENST00000565832 ASS1P00966 412 aaKnown RBP6.66□□□□□ -1.34
CHD9-217ENST00000565832 ITGB3P05106 788 aa6.66□□□□□ -1.34
CHD9-217ENST00000565832 RARBP10826 455 aa6.66□□□□□ -1.34
CHD9-217ENST00000565832 DARSP14868 501 aaKnown RBP6.66□□□□□ -1.34
CHD9-217ENST00000565832 ZSCAN20P17040 1043 aaPredicted RBP6.66□□□□□ -1.34
CHD9-217ENST00000565832 IBSPP21815 317 aaPredicted RBP6.66□□□□□ -1.34
CHD9-217ENST00000565832 SCTRP47872 440 aa6.66□□□□□ -1.34
CHD9-217ENST00000565832 AFF1P51825 1210 aaKnown RBP6.66□□□□□ -1.34
CHD9-217ENST00000565832 GCNT1Q02742 428 aa6.66□□□□□ -1.34
CHD9-217ENST00000565832 SNX17Q15036 470 aa6.66□□□□□ -1.34
CHD9-217ENST00000565832 WDR72Q3MJ13 1102 aa6.66□□□□□ -1.34
CHD9-217ENST00000565832 INTS6LQ5JSJ4 861 aaKnown RBP6.66□□□□□ -1.34
CHD9-217ENST00000565832 PAPD7Q5XG87 772 aaKnown RBP6.66□□□□□ -1.34
CHD9-217ENST00000565832 VPS36Q86VN1 386 aa6.66□□□□□ -1.34
CHD9-217ENST00000565832 NOA1Q8NC60 698 aaKnown RBP6.66□□□□□ -1.34
CHD9-217ENST00000565832 MNS1Q8NEH6 495 aa6.66□□□□□ -1.34
CHD9-217ENST00000565832 TRIM58Q8NG06 486 aa6.66□□□□□ -1.34
CHD9-217ENST00000565832 CXorf38Q8TB03 319 aa6.66□□□□□ -1.34
CHD9-217ENST00000565832 C18orf25Q96B23 403 aaPredicted RBP6.66□□□□□ -1.34
CHD9-217ENST00000565832 ZBTB9Q96C00 473 aa6.66□□□□□ -1.34
CHD9-217ENST00000565832 CYFIP2Q96F07 1278 aa6.66□□□□□ -1.34
CHD9-217ENST00000565832 BTBD6Q96KE9 485 aa6.66□□□□□ -1.34
CHD9-217ENST00000565832 ZSWIM1Q9BR11 485 aa6.66□□□□□ -1.34
CHD9-217ENST00000565832 GCOM2Q9BZD3 368 aaPredicted RBP6.66□□□□□ -1.34
CHD9-217ENST00000565832 JRKLQ9Y4A0 524 aa6.66□□□□□ -1.34
CHD9-217ENST00000565832 PCDHB4Q9Y5E5 795 aa6.66□□□□□ -1.34
CHD9-217ENST00000565832 PPEF2O14830 753 aa6.65□□□□□ -1.34
CHD9-217ENST00000565832 ADAMTS4O75173 837 aa6.65□□□□□ -1.34
CHD9-217ENST00000565832 TADA3O75528 432 aa6.65□□□□□ -1.34
CHD9-217ENST00000565832 CHRNA1P02708 482 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms