RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 CSGALNACT2Q8N6G5 542 aa6.94□□□□□ -1.3
TCF4-228ENST00000565393 ATAD1Q8NBU5 361 aa6.94□□□□□ -1.3
TCF4-228ENST00000565393 LEMD2Q8NC56 503 aa6.94□□□□□ -1.3
TCF4-228ENST00000565393 PJA1Q8NG27 643 aa6.94□□□□□ -1.3
TCF4-228ENST00000565393 ZSCAN18Q8TBC5 510 aaPredicted RBP6.94□□□□□ -1.3
TCF4-228ENST00000565393 CACTINQ8WUQ7 758 aaKnown RBP6.94□□□□□ -1.3
TCF4-228ENST00000565393 KCNN1Q92952 543 aa6.94□□□□□ -1.3
TCF4-228ENST00000565393 SAAL1Q96ER3 474 aa6.94□□□□□ -1.3
TCF4-228ENST00000565393 USP28Q96RU2 1077 aa6.94□□□□□ -1.3
TCF4-228ENST00000565393 TMEM209Q96SK2 561 aa6.94□□□□□ -1.3
TCF4-228ENST00000565393 FIZ1Q96SL8 496 aa6.94□□□□□ -1.3
TCF4-228ENST00000565393 SEPT5Q99719 369 aaPredicted RBP6.94□□□□□ -1.3
TCF4-228ENST00000565393 LRRC27Q9C0I9 530 aa6.94□□□□□ -1.3
TCF4-228ENST00000565393 GPR88Q9GZN0 384 aa6.94□□□□□ -1.3
TCF4-228ENST00000565393 ATXN3LQ9H3M9 355 aa6.94□□□□□ -1.3
TCF4-228ENST00000565393 ST6GALNAC4Q9H4F1 302 aa6.94□□□□□ -1.3
TCF4-228ENST00000565393 PCIF1Q9H4Z3 704 aa6.94□□□□□ -1.3
TCF4-228ENST00000565393 HEBP1Q9NRV9 189 aa6.94□□□□□ -1.3
TCF4-228ENST00000565393 SPATA6Q9NWH7 488 aaPredicted RBP6.94□□□□□ -1.3
TCF4-228ENST00000565393 DSEQ9UL01 958 aa6.94□□□□□ -1.3
TCF4-228ENST00000565393 AGAP1Q9UPQ3 857 aa6.94□□□□□ -1.3
TCF4-228ENST00000565393 MTMR6Q9Y217 621 aa6.94□□□□□ -1.3
TCF4-228ENST00000565393 MRPS17Q9Y2R5 130 aaKnown RBP6.94□□□□□ -1.3
TCF4-228ENST00000565393 STYXL1Q9Y6J8 313 aa6.94□□□□□ -1.3
TCF4-228ENST00000565393 R4GN57 208 aa6.94□□□□□ -1.3
TCF4-228ENST00000565393 XIRP2A4UGR9 3374 aa6.94□□□□□ -1.3
TCF4-228ENST00000565393 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.93□□□□□ -1.3
TCF4-228ENST00000565393 A0A1W2PRU2 124 aa6.93□□□□□ -1.3
TCF4-228ENST00000565393 ANO9A1A5B4 782 aa6.93□□□□□ -1.3
TCF4-228ENST00000565393 MAN2B1O00754 1011 aa6.93□□□□□ -1.3
TCF4-228ENST00000565393 DPYSL4O14531 572 aa6.93□□□□□ -1.3
TCF4-228ENST00000565393 SPTLC2O15270 562 aa6.93□□□□□ -1.3
TCF4-228ENST00000565393 FAM189A1O60320 539 aa6.93□□□□□ -1.3
TCF4-228ENST00000565393 SOAT2O75908 522 aa6.93□□□□□ -1.3
TCF4-228ENST00000565393 PRPF6O94906 941 aaKnown RBP6.93□□□□□ -1.3
TCF4-228ENST00000565393 IL18RAPO95256 599 aa6.93□□□□□ -1.3
TCF4-228ENST00000565393 KRT19P08727 400 aa6.93□□□□□ -1.3
TCF4-228ENST00000565393 SP9P0CG40 484 aa6.93□□□□□ -1.3
TCF4-228ENST00000565393 PSMC3P17980 439 aa6.93□□□□□ -1.3
TCF4-228ENST00000565393 ADSSP30520 456 aa6.93□□□□□ -1.3
TCF4-228ENST00000565393 GDI1P31150 447 aa6.93□□□□□ -1.3
TCF4-228ENST00000565393 AARSP49588 968 aaKnown RBP eCLIP6.93□□□□□ -1.3
TCF4-228ENST00000565393 KPNA1P52294 538 aaPredicted RBP6.93□□□□□ -1.3
TCF4-228ENST00000565393 AMPD3Q01432 767 aa6.93□□□□□ -1.3
TCF4-228ENST00000565393 MYBPC2Q14324 1141 aa6.93□□□□□ -1.3
TCF4-228ENST00000565393 MGAT5BQ3V5L5 792 aa6.93□□□□□ -1.3
TCF4-228ENST00000565393 SLC39A12Q504Y0 691 aa6.93□□□□□ -1.3
TCF4-228ENST00000565393 ARHGAP15Q53QZ3 475 aa6.93□□□□□ -1.3
TCF4-228ENST00000565393 L1TD1Q5T7N2 865 aaKnown RBP6.93□□□□□ -1.3
TCF4-228ENST00000565393 WSCD1Q658N2 575 aa6.93□□□□□ -1.3
TCF4-228ENST00000565393 POTEHQ6S545 545 aa6.93□□□□□ -1.3
TCF4-228ENST00000565393 CRELD2Q6UXH1 353 aaPredicted RBP6.93□□□□□ -1.3
TCF4-228ENST00000565393 ITIH5Q86UX2 942 aa6.93□□□□□ -1.3
TCF4-228ENST00000565393 SPRYD3Q8NCJ5 442 aa6.93□□□□□ -1.3
TCF4-228ENST00000565393 CSGALNACT1Q8TDX6 532 aa6.93□□□□□ -1.3
TCF4-228ENST00000565393 GIPC2Q8TF65 315 aa6.93□□□□□ -1.3
TCF4-228ENST00000565393 SMARCD2Q92925 531 aa6.93□□□□□ -1.3
TCF4-228ENST00000565393 IRF7Q92985 503 aa6.93□□□□□ -1.3
TCF4-228ENST00000565393 HVCN1Q96D96 273 aa6.93□□□□□ -1.3
TCF4-228ENST00000565393 DNAJC19Q96DA6 116 aa6.93□□□□□ -1.3
TCF4-228ENST00000565393 ASB16Q96NS5 453 aa6.93□□□□□ -1.3
TCF4-228ENST00000565393 HINFPQ9BQA5 517 aa6.93□□□□□ -1.3
TCF4-228ENST00000565393 TMEM206Q9H813 350 aa6.93□□□□□ -1.3
TCF4-228ENST00000565393 DLGAP2Q9P1A6 1054 aa6.93□□□□□ -1.3
TCF4-228ENST00000565393 NDRG2Q9UN36 371 aaKnown RBP6.93□□□□□ -1.3
TCF4-228ENST00000565393 C2CD2Q9Y426 696 aa6.93□□□□□ -1.3
TCF4-228ENST00000565393 YIPF1Q9Y548 306 aa6.93□□□□□ -1.3
TCF4-228ENST00000565393 ASB3Q9Y575 518 aa6.93□□□□□ -1.3
TCF4-228ENST00000565393 TRANK1O15050 2925 aa6.93□□□□□ -1.3
TCF4-228ENST00000565393 MTMR11A4FU01 709 aa6.92□□□□□ -1.3
TCF4-228ENST00000565393 PRR23AA6NEV1 266 aa6.92□□□□□ -1.3
TCF4-228ENST00000565393 ZNF233A6NK53 670 aa6.92□□□□□ -1.3
TCF4-228ENST00000565393 HEPACAM2A8MVW5 462 aa6.92□□□□□ -1.3
TCF4-228ENST00000565393 NRG2O14511 850 aaPredicted RBP6.92□□□□□ -1.3
TCF4-228ENST00000565393 EXTL3O43909 919 aa6.92□□□□□ -1.3
TCF4-228ENST00000565393 HUS1O60921 280 aa6.92□□□□□ -1.3
TCF4-228ENST00000565393 PRPF40AO75400 957 aaKnown RBP6.92□□□□□ -1.3
TCF4-228ENST00000565393 MOSPD3O75425 235 aa6.92□□□□□ -1.3
TCF4-228ENST00000565393 VNN2O95498 520 aa6.92□□□□□ -1.3
TCF4-228ENST00000565393 FGF19O95750 216 aa6.92□□□□□ -1.3
TCF4-228ENST00000565393 LMNAP02545 664 aaKnown RBP6.92□□□□□ -1.3
TCF4-228ENST00000565393 CYP11A1P05108 521 aa6.92□□□□□ -1.3
TCF4-228ENST00000565393 GLULP15104 373 aa6.92□□□□□ -1.3
TCF4-228ENST00000565393 GARTP22102 1010 aa6.92□□□□□ -1.3
TCF4-228ENST00000565393 GABRR2P28476 465 aa6.92□□□□□ -1.3
TCF4-228ENST00000565393 PNPLA4P41247 253 aa6.92□□□□□ -1.3
TCF4-228ENST00000565393 CASP5P51878 434 aa6.92□□□□□ -1.3
TCF4-228ENST00000565393 RBP5P82980 135 aa6.92□□□□□ -1.3
TCF4-228ENST00000565393 POU5F1Q01860 360 aaKnown RBP6.92□□□□□ -1.3
TCF4-228ENST00000565393 SMARCB1Q12824 385 aa6.92□□□□□ -1.3
TCF4-228ENST00000565393 BFSP1Q12934 665 aa6.92□□□□□ -1.3
TCF4-228ENST00000565393 ALCAMQ13740 583 aa6.92□□□□□ -1.3
TCF4-228ENST00000565393 VEPH1Q14D04 833 aa6.92□□□□□ -1.3
TCF4-228ENST00000565393 SV2CQ496J9 727 aa6.92□□□□□ -1.3
TCF4-228ENST00000565393 GPR158Q5T848 1215 aa6.92□□□□□ -1.3
TCF4-228ENST00000565393 ZC3H14Q6PJT7 736 aaKnown RBP6.92□□□□□ -1.3
TCF4-228ENST00000565393 VITQ6UXI7 678 aa6.92□□□□□ -1.3
TCF4-228ENST00000565393 STXBP4Q6ZWJ1 553 aa6.92□□□□□ -1.3
TCF4-228ENST00000565393 LRRTM3Q86VH5 581 aa6.92□□□□□ -1.3
TCF4-228ENST00000565393 NT5DC4Q86YG4 428 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms