RNA–Protein interactions for RNA: ENST00000564709.5

SPSB3-206, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 2,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-206ENST00000564709 CCNG2Q16589 344 aa23.7■■□□□ 1.38
SPSB3-206ENST00000564709 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.7■■□□□ 1.38
SPSB3-206ENST00000564709 TRIM50Q86XT4 487 aa23.7■■□□□ 1.38
SPSB3-206ENST00000564709 BRSK2Q8IWQ3 736 aa23.7■■□□□ 1.38
SPSB3-206ENST00000564709 VCPIP1Q96JH7 1222 aa23.7■■□□□ 1.38
SPSB3-206ENST00000564709 MCEEQ96PE7 176 aa23.7■■□□□ 1.38
SPSB3-206ENST00000564709 TMEM134Q9H6X4 195 aa23.7■■□□□ 1.38
SPSB3-206ENST00000564709 ZNF132P52740 706 aa23.69■■□□□ 1.38
SPSB3-206ENST00000564709 ZNF252P-AS1Q0IIN9 211 aa23.69■■□□□ 1.38
SPSB3-206ENST00000564709 EXD1Q8NHP7 514 aa23.69■■□□□ 1.38
SPSB3-206ENST00000564709 R3HDMLQ9H3Y0 253 aa23.69■■□□□ 1.38
SPSB3-206ENST00000564709 SOWAHBA6NEL2 793 aa23.68■■□□□ 1.38
SPSB3-206ENST00000564709 MMP8P22894 467 aa23.68■■□□□ 1.38
SPSB3-206ENST00000564709 LY6KQ17RY6 165 aa23.68■■□□□ 1.38
SPSB3-206ENST00000564709 LRRC71Q8N4P6 559 aa23.68■■□□□ 1.38
SPSB3-206ENST00000564709 GLIS1Q8NBF1 620 aa23.68■■□□□ 1.38
SPSB3-206ENST00000564709 CCDC197Q8NCU1 140 aa23.68■■□□□ 1.38
SPSB3-206ENST00000564709 C9orf72Q96LT7 481 aa23.68■■□□□ 1.38
SPSB3-206ENST00000564709 NRBP2Q9NSY0 501 aa23.68■■□□□ 1.38
SPSB3-206ENST00000564709 TBK1Q9UHD2 729 aa23.68■■□□□ 1.38
SPSB3-206ENST00000564709 FAM189A1O60320 539 aa23.68■■□□□ 1.38
SPSB3-206ENST00000564709 ASS1P00966 412 aaKnown RBP23.68■■□□□ 1.38
SPSB3-206ENST00000564709 KRT1P04264 644 aa23.68■■□□□ 1.38
SPSB3-206ENST00000564709 NFX1Q12986 1120 aaKnown RBP23.68■■□□□ 1.38
SPSB3-206ENST00000564709 NCAPG2Q86XI2 1143 aa23.68■■□□□ 1.38
SPSB3-206ENST00000564709 UBR7Q8N806 425 aa23.68■■□□□ 1.38
SPSB3-206ENST00000564709 SERPINB12Q96P63 405 aa23.68■■□□□ 1.38
SPSB3-206ENST00000564709 ELAC2Q9BQ52 826 aaKnown RBP23.68■■□□□ 1.38
SPSB3-206ENST00000564709 PTPRFP10586 1907 aa23.68■■□□□ 1.38
SPSB3-206ENST00000564709 TMEM120BA0PK00 339 aa23.67■■□□□ 1.38
SPSB3-206ENST00000564709 CETPP11597 493 aa23.67■■□□□ 1.38
SPSB3-206ENST00000564709 P3H1Q32P28 736 aa23.67■■□□□ 1.38
SPSB3-206ENST00000564709 TXNRD3NBQ6F5E7 133 aa23.67■■□□□ 1.38
SPSB3-206ENST00000564709 TAX1BP1Q86VP1 789 aa23.67■■□□□ 1.38
SPSB3-206ENST00000564709 ANKRD42Q8N9B4 389 aa23.67■■□□□ 1.38
SPSB3-206ENST00000564709 DYDC1Q8WWB3 177 aa23.67■■□□□ 1.38
SPSB3-206ENST00000564709 KCNN1Q92952 543 aa23.67■■□□□ 1.38
SPSB3-206ENST00000564709 HAUS1Q96CS2 278 aa23.67■■□□□ 1.38
SPSB3-206ENST00000564709 EFCC1Q9HA90 598 aa23.67■■□□□ 1.38
SPSB3-206ENST00000564709 IP6K2Q9UHH9 426 aa23.67■■□□□ 1.38
SPSB3-206ENST00000564709 F8VP50 259 aa23.67■■□□□ 1.38
SPSB3-206ENST00000564709 MSCO60682 206 aa23.67■■□□□ 1.38
SPSB3-206ENST00000564709 WEE2P0C1S8 567 aa23.67■■□□□ 1.38
SPSB3-206ENST00000564709 HIRAP54198 1017 aaPredicted RBP23.67■■□□□ 1.38
SPSB3-206ENST00000564709 OGDHQ02218 1023 aa23.67■■□□□ 1.38
SPSB3-206ENST00000564709 ADCY1Q08828 1119 aa23.67■■□□□ 1.38
SPSB3-206ENST00000564709 VSTM1Q6UX27 236 aa23.67■■□□□ 1.38
SPSB3-206ENST00000564709 MFSD7Q6UXD7 560 aa23.67■■□□□ 1.38
SPSB3-206ENST00000564709 CYP4X1Q8N118 509 aa23.67■■□□□ 1.38
SPSB3-206ENST00000564709 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.67■■□□□ 1.381e-7■■■□□ 19
SPSB3-206ENST00000564709 FHDC1Q9C0D6 1143 aaPredicted RBP23.67■■□□□ 1.38
SPSB3-206ENST00000564709 HOMER3Q9NSC5 361 aa23.67■■□□□ 1.38
SPSB3-206ENST00000564709 DNPEPQ9ULA0 475 aa23.67■■□□□ 1.38
SPSB3-206ENST00000564709 IVNS1ABPQ9Y6Y0 642 aa23.67■■□□□ 1.38
SPSB3-206ENST00000564709 MAFO75444 373 aaPredicted RBP23.66■■□□□ 1.38
SPSB3-206ENST00000564709 ZSCAN5DPP0CG00 497 aa23.66■■□□□ 1.38
SPSB3-206ENST00000564709 CAV1Q03135 178 aa23.66■■□□□ 1.38
SPSB3-206ENST00000564709 VGLL4Q14135 290 aa23.66■■□□□ 1.38
SPSB3-206ENST00000564709 CYP4A22Q5TCH4 519 aa23.66■■□□□ 1.38
SPSB3-206ENST00000564709 FAM160B1Q5W0V3 765 aa23.66■■□□□ 1.38
SPSB3-206ENST00000564709 LBX2Q6XYB7 198 aa23.66■■□□□ 1.38
SPSB3-206ENST00000564709 WDR49Q8IV35 697 aa23.66■■□□□ 1.38
SPSB3-206ENST00000564709 CCDC89Q8N998 374 aa23.66■■□□□ 1.38
SPSB3-206ENST00000564709 CCT6BQ92526 530 aa23.66■■□□□ 1.38
SPSB3-206ENST00000564709 SLITRK1Q96PX8 696 aa23.66■■□□□ 1.38
SPSB3-206ENST00000564709 KCNK9Q9NPC2 374 aa23.66■■□□□ 1.38
SPSB3-206ENST00000564709 CISHQ9NSE2 258 aa23.66■■□□□ 1.38
SPSB3-206ENST00000564709 MGAMO43451 1857 aa23.66■■□□□ 1.38
SPSB3-206ENST00000564709 TMEM191CA6NGB0 347 aa23.66■■□□□ 1.38
SPSB3-206ENST00000564709 TMEM191BP0C7N4 346 aa23.66■■□□□ 1.38
SPSB3-206ENST00000564709 ETS1P14921 441 aa23.66■■□□□ 1.38
SPSB3-206ENST00000564709 KLRC2P26717 231 aa23.66■■□□□ 1.38
SPSB3-206ENST00000564709 OSTNP61366 133 aa23.66■■□□□ 1.38
SPSB3-206ENST00000564709 NOL9Q5SY16 702 aaKnown RBP23.66■■□□□ 1.38
SPSB3-206ENST00000564709 DNAJC24Q6P3W2 148 aa23.66■■□□□ 1.38
SPSB3-206ENST00000564709 CDR2LQ86X02 465 aaPredicted RBP23.66■■□□□ 1.38
SPSB3-206ENST00000564709 RNF149Q8NC42 400 aa23.66■■□□□ 1.38
SPSB3-206ENST00000564709 MRPL4Q9BYD3 311 aaKnown RBP23.66■■□□□ 1.38
SPSB3-206ENST00000564709 ACTR5Q9H9F9 607 aaPredicted RBP23.66■■□□□ 1.38
SPSB3-206ENST00000564709 SNCAIPQ9Y6H5 919 aa23.66■■□□□ 1.38
SPSB3-206ENST00000564709 SCTRP47872 440 aa23.65■■□□□ 1.38
SPSB3-206ENST00000564709 TFAMQ00059 246 aaKnown RBP23.65■■□□□ 1.38
SPSB3-206ENST00000564709 CYP4F22Q6NT55 531 aa23.65■■□□□ 1.38
SPSB3-206ENST00000564709 GPAT2Q6NUI2 795 aa23.65■■□□□ 1.38
SPSB3-206ENST00000564709 ZPBP2Q6X784 338 aa23.65■■□□□ 1.38
SPSB3-206ENST00000564709 TMEM130Q8N3G9 435 aa23.65■■□□□ 1.38
SPSB3-206ENST00000564709 CCDC134Q9H6E4 229 aa23.65■■□□□ 1.38
SPSB3-206ENST00000564709 CD2APQ9Y5K6 639 aa23.65■■□□□ 1.38
SPSB3-206ENST00000564709 ASAP2O43150 1006 aa23.65■■□□□ 1.38
SPSB3-206ENST00000564709 USP2O75604 605 aaPredicted RBP23.65■■□□□ 1.38
SPSB3-206ENST00000564709 TOM1L1O75674 476 aa23.65■■□□□ 1.38
SPSB3-206ENST00000564709 ARIH2O95376 493 aa23.65■■□□□ 1.38
SPSB3-206ENST00000564709 GJB1P08034 283 aa23.65■■□□□ 1.38
SPSB3-206ENST00000564709 LAMTOR4Q0VGL1 99 aa23.65■■□□□ 1.38
SPSB3-206ENST00000564709 DCUN1D2Q6PH85 259 aa23.65■■□□□ 1.38
SPSB3-206ENST00000564709 PIGWQ7Z7B1 504 aa23.65■■□□□ 1.38
SPSB3-206ENST00000564709 TFAP2BQ92481 460 aa23.65■■□□□ 1.38
SPSB3-206ENST00000564709 ZBTB10Q96DT7 871 aa23.65■■□□□ 1.38
SPSB3-206ENST00000564709 SAMD15Q9P1V8 674 aa23.65■■□□□ 1.38
SPSB3-206ENST00000564709 LIASO43766 372 aa23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms