RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 B3GALNT2Q8NCR0 500 aa5.67□□□□□ -1.5
CHD9-212ENST00000564641 SLC30A5Q8TAD4 765 aa5.67□□□□□ -1.5
CHD9-212ENST00000564641 SCAMP4Q969E2 229 aa5.67□□□□□ -1.5
CHD9-212ENST00000564641 COA7Q96BR5 231 aa5.67□□□□□ -1.5
CHD9-212ENST00000564641 SIK2Q9H0K1 926 aa5.67□□□□□ -1.5
CHD9-212ENST00000564641 ASB6Q9NWX5 421 aa5.67□□□□□ -1.5
CHD9-212ENST00000564641 PCDHB1Q9Y5F3 818 aa5.67□□□□□ -1.5
CHD9-212ENST00000564641 ALG1L2C9J202 215 aa5.66□□□□□ -1.5
CHD9-212ENST00000564641 ARIH2O95376 493 aa5.66□□□□□ -1.5
CHD9-212ENST00000564641 FTH1P19P0C7X4 201 aa5.66□□□□□ -1.5
CHD9-212ENST00000564641 EDNRBP24530 442 aa5.66□□□□□ -1.5
CHD9-212ENST00000564641 GUCY2FP51841 1108 aa5.66□□□□□ -1.5
CHD9-212ENST00000564641 ITKQ08881 620 aa5.66□□□□□ -1.5
CHD9-212ENST00000564641 IL10RAQ13651 578 aa5.66□□□□□ -1.5
CHD9-212ENST00000564641 C3orf36Q3SXR2 165 aa5.66□□□□□ -1.5
CHD9-212ENST00000564641 FLYWCH1Q4VC44 716 aa5.66□□□□□ -1.5
CHD9-212ENST00000564641 PDPRQ8NCN5 879 aa5.66□□□□□ -1.5
CHD9-212ENST00000564641 SLC17A8Q8NDX2 589 aa5.66□□□□□ -1.5
CHD9-212ENST00000564641 TMIEQ8NEW7 156 aa5.66□□□□□ -1.5
CHD9-212ENST00000564641 NSUN6Q8TEA1 469 aaKnown RBP5.66□□□□□ -1.5
CHD9-212ENST00000564641 TFAP2BQ92481 460 aa5.66□□□□□ -1.5
CHD9-212ENST00000564641 LPIN2Q92539 896 aa5.66□□□□□ -1.5
CHD9-212ENST00000564641 ANKS1AQ92625 1134 aa5.66□□□□□ -1.5
CHD9-212ENST00000564641 RAB24Q969Q5 203 aa5.66□□□□□ -1.5
CHD9-212ENST00000564641 TEKT5Q96M29 485 aa5.66□□□□□ -1.5
CHD9-212ENST00000564641 TRIB1Q96RU8 372 aa5.66□□□□□ -1.5
CHD9-212ENST00000564641 BRD9Q9H8M2 597 aa5.66□□□□□ -1.5
CHD9-212ENST00000564641 CPNE5Q9HCH3 593 aa5.66□□□□□ -1.5
CHD9-212ENST00000564641 KLC4Q9NSK0 619 aa5.66□□□□□ -1.5
CHD9-212ENST00000564641 CFAP97Q9P2B7 532 aa5.66□□□□□ -1.5
CHD9-212ENST00000564641 TRHDEQ9UKU6 1024 aa5.66□□□□□ -1.5
CHD9-212ENST00000564641 POLHQ9Y253 713 aa5.66□□□□□ -1.5
CHD9-212ENST00000564641 TRIAP1O43715 76 aa5.65□□□□□ -1.5
CHD9-212ENST00000564641 PCDHGA12O60330 932 aa5.65□□□□□ -1.5
CHD9-212ENST00000564641 FAM153CQ494X1 144 aa5.65□□□□□ -1.5
CHD9-212ENST00000564641 THEMIS2Q5TEJ8 643 aa5.65□□□□□ -1.5
CHD9-212ENST00000564641 EFCAB2Q5VUJ9 269 aa5.65□□□□□ -1.5
CHD9-212ENST00000564641 TAPT1Q6NXT6 567 aa5.65□□□□□ -1.5
CHD9-212ENST00000564641 ZNF788Q6ZQV5 615 aa5.65□□□□□ -1.5
CHD9-212ENST00000564641 PNMA8AQ86V59 439 aaPredicted RBP5.65□□□□□ -1.5
CHD9-212ENST00000564641 MYCBPAPQ8TBZ2 947 aa5.65□□□□□ -1.5
CHD9-212ENST00000564641 POC1BQ8TC44 478 aa5.65□□□□□ -1.5
CHD9-212ENST00000564641 OSBPL9Q96SU4 736 aa5.65□□□□□ -1.5
CHD9-212ENST00000564641 ALG8Q9BVK2 526 aa5.65□□□□□ -1.5
CHD9-212ENST00000564641 SLC13A1Q9BZW2 595 aa5.65□□□□□ -1.5
CHD9-212ENST00000564641 IL17RBQ9NRM6 502 aa5.65□□□□□ -1.5
CHD9-212ENST00000564641 PCDHGA9Q9Y5G4 932 aaKnown RBP5.65□□□□□ -1.5
CHD9-212ENST00000564641 PCDHGA8Q9Y5G5 932 aa5.65□□□□□ -1.5
CHD9-212ENST00000564641 PCDHGA7Q9Y5G6 932 aa5.65□□□□□ -1.5
CHD9-212ENST00000564641 PCDHGA6Q9Y5G7 932 aa5.65□□□□□ -1.5
CHD9-212ENST00000564641 PCDHGA3Q9Y5H0 932 aa5.65□□□□□ -1.5
CHD9-212ENST00000564641 WNT6Q9Y6F9 365 aa5.65□□□□□ -1.5
CHD9-212ENST00000564641 CECR2Q9BXF3 1484 aa5.64□□□□□ -1.51
CHD9-212ENST00000564641 A0A0B4J269 797 aa5.64□□□□□ -1.51
CHD9-212ENST00000564641 ADM5C9JUS6 153 aa5.64□□□□□ -1.51
CHD9-212ENST00000564641 PPP3CBP16298 524 aa5.64□□□□□ -1.51
CHD9-212ENST00000564641 CDK11BP21127 795 aaKnown RBP5.64□□□□□ -1.51
CHD9-212ENST00000564641 MALP21145 153 aa5.64□□□□□ -1.51
CHD9-212ENST00000564641 SMARCA1P28370 1054 aa5.64□□□□□ -1.51
CHD9-212ENST00000564641 NPTX2P47972 431 aa5.64□□□□□ -1.51
CHD9-212ENST00000564641 TUBB3Q13509 450 aa5.64□□□□□ -1.51
CHD9-212ENST00000564641 MTMR1Q13613 665 aa5.64□□□□□ -1.51
CHD9-212ENST00000564641 TXNRD1Q16881 649 aa5.64□□□□□ -1.51
CHD9-212ENST00000564641 ABCB5Q2M3G0 1257 aa5.64□□□□□ -1.51
CHD9-212ENST00000564641 CCDC93Q567U6 631 aa5.64□□□□□ -1.51
CHD9-212ENST00000564641 HASPINQ8TF76 798 aa5.64□□□□□ -1.51
CHD9-212ENST00000564641 PBKQ96KB5 322 aa5.64□□□□□ -1.51
CHD9-212ENST00000564641 DMRTA2Q96SC8 542 aa5.64□□□□□ -1.51
CHD9-212ENST00000564641 VSX1Q9NZR4 365 aaPredicted RBP5.64□□□□□ -1.51
CHD9-212ENST00000564641 SPEF1Q9Y4P9 236 aa5.64□□□□□ -1.51
CHD9-212ENST00000564641 WDR27A2RRH5 827 aa5.63□□□□□ -1.51
CHD9-212ENST00000564641 POLRMTO00411 1230 aaKnown RBP5.63□□□□□ -1.51
CHD9-212ENST00000564641 GABRDO14764 452 aa5.63□□□□□ -1.51
CHD9-212ENST00000564641 SLC16A6O15403 523 aa5.63□□□□□ -1.51
CHD9-212ENST00000564641 URI1O94763 535 aaPredicted RBP5.63□□□□□ -1.51
CHD9-212ENST00000564641 CHRM2P08172 466 aa5.63□□□□□ -1.51
CHD9-212ENST00000564641 FXR1P51114 621 aaKnown RBP eCLIP5.63□□□□□ -1.51
CHD9-212ENST00000564641 UAP1L1Q3KQV9 507 aa5.63□□□□□ -1.51
CHD9-212ENST00000564641 PLAC9Q5JTB6 97 aa5.63□□□□□ -1.51
CHD9-212ENST00000564641 TSTD2Q5T7W7 516 aa5.63□□□□□ -1.51
CHD9-212ENST00000564641 SLC4A10Q6U841 1118 aa5.63□□□□□ -1.51
CHD9-212ENST00000564641 TSHZ1Q6ZSZ6 1077 aa5.63□□□□□ -1.51
CHD9-212ENST00000564641 FAM9AQ8IZU1 332 aaPredicted RBP5.63□□□□□ -1.51
CHD9-212ENST00000564641 C3orf20Q8ND61 904 aa5.63□□□□□ -1.51
CHD9-212ENST00000564641 MTMR8Q96EF0 704 aa5.63□□□□□ -1.51
CHD9-212ENST00000564641 HAPLN3Q96S86 360 aa5.63□□□□□ -1.51
CHD9-212ENST00000564641 CNPPD1Q9BV87 410 aa5.63□□□□□ -1.51
CHD9-212ENST00000564641 SLC45A2Q9UMX9 530 aa5.63□□□□□ -1.51
CHD9-212ENST00000564641 EIF4G1Q04637 1599 aaKnown RBP5.63□□□□□ -1.51
CHD9-212ENST00000564641 SCRIBQ14160 1630 aa5.63□□□□□ -1.51
CHD9-212ENST00000564641 CC2D2AQ9P2K1 1620 aa5.63□□□□□ -1.51
CHD9-212ENST00000564641 F5H697 171 aa5.62□□□□□ -1.51
CHD9-212ENST00000564641 FZD9O00144 591 aa5.62□□□□□ -1.51
CHD9-212ENST00000564641 F2RL2O00254 374 aa5.62□□□□□ -1.51
CHD9-212ENST00000564641 TTLL1O95922 423 aa5.62□□□□□ -1.51
CHD9-212ENST00000564641 MC2RQ01718 297 aa5.62□□□□□ -1.51
CHD9-212ENST00000564641 KHDC1Q4VXA5 237 aaKnown RBP5.62□□□□□ -1.51
CHD9-212ENST00000564641 MIER2Q8N344 545 aa5.62□□□□□ -1.51
CHD9-212ENST00000564641 SH2D3CQ8N5H7 860 aa5.62□□□□□ -1.51
CHD9-212ENST00000564641 NSUN7Q8NE18 718 aaKnown RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms