RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 MXRA7P84157 204 aa4□□□□□ -1.77
CHD9-211ENST00000564600 CCDC93Q567U6 631 aa4□□□□□ -1.77
CHD9-211ENST00000564600 SLC4A10Q6U841 1118 aa4□□□□□ -1.77
CHD9-211ENST00000564600 STAG1Q8WVM7 1258 aa4□□□□□ -1.77
CHD9-211ENST00000564600 MED15Q96RN5 788 aa4□□□□□ -1.77
CHD9-211ENST00000564600 SMOC2Q9H3U7 446 aa4□□□□□ -1.77
CHD9-211ENST00000564600 KIAA1586Q9HCI6 787 aa4□□□□□ -1.77
CHD9-211ENST00000564600 HOMER2Q9NSB8 354 aa4□□□□□ -1.77
CHD9-211ENST00000564600 CALCOCO1Q9P1Z2 691 aa4□□□□□ -1.77
CHD9-211ENST00000564600 CFAP20Q9Y6A4 193 aaKnown RBP4□□□□□ -1.77
CHD9-211ENST00000564600 FNDC1Q4ZHG4 1894 aaPredicted RBP3.99□□□□□ -1.77
CHD9-211ENST00000564600 RBMXL2O75526 392 aaKnown RBP3.99□□□□□ -1.77
CHD9-211ENST00000564600 PRDX5P30044 214 aa3.99□□□□□ -1.77
CHD9-211ENST00000564600 RECQLP46063 649 aaPredicted RBP3.99□□□□□ -1.77
CHD9-211ENST00000564600 RARRES1P49788 294 aa3.99□□□□□ -1.77
CHD9-211ENST00000564600 FOXF2Q12947 444 aa3.99□□□□□ -1.77
CHD9-211ENST00000564600 DYRK1AQ13627 763 aa3.99□□□□□ -1.77
CHD9-211ENST00000564600 ATP2B3Q16720 1220 aa3.99□□□□□ -1.77
CHD9-211ENST00000564600 VWA1Q6PCB0 445 aa3.99□□□□□ -1.77
CHD9-211ENST00000564600 TTC7BQ86TV6 843 aa3.99□□□□□ -1.77
CHD9-211ENST00000564600 FAM90A1Q86YD7 464 aa3.99□□□□□ -1.77
CHD9-211ENST00000564600 COLGALT2Q8IYK4 626 aa3.99□□□□□ -1.77
CHD9-211ENST00000564600 ADGRG5Q8IZF4 528 aa3.99□□□□□ -1.77
CHD9-211ENST00000564600 MIER2Q8N344 545 aa3.99□□□□□ -1.77
CHD9-211ENST00000564600 CPA6Q8N4T0 437 aa3.99□□□□□ -1.77
CHD9-211ENST00000564600 SCARB1Q8WTV0 552 aa3.99□□□□□ -1.77
CHD9-211ENST00000564600 PDLIM2Q96JY6 352 aa3.99□□□□□ -1.77
CHD9-211ENST00000564600 ZNF778Q96MU6 729 aa3.99□□□□□ -1.77
CHD9-211ENST00000564600 GTPBP4Q9BZE4 634 aaKnown RBP3.99□□□□□ -1.77
CHD9-211ENST00000564600 SLAMF7Q9NQ25 335 aa3.99□□□□□ -1.77
CHD9-211ENST00000564600 IL17RBQ9NRM6 502 aa3.99□□□□□ -1.77
CHD9-211ENST00000564600 TLK1Q9UKI8 766 aa3.99□□□□□ -1.77
CHD9-211ENST00000564600 LUC7L2Q9Y383 392 aaKnown RBP3.99□□□□□ -1.77
CHD9-211ENST00000564600 SETD1BQ9UPS6 1966 aaKnown RBP3.98□□□□□ -1.77
CHD9-211ENST00000564600 ZNF785A8K8V0 405 aa3.98□□□□□ -1.77
CHD9-211ENST00000564600 YY2O15391 372 aa3.98□□□□□ -1.77
CHD9-211ENST00000564600 C1RP00736 705 aa3.98□□□□□ -1.77
CHD9-211ENST00000564600 AHSGP02765 367 aa3.98□□□□□ -1.77
CHD9-211ENST00000564600 GJB1P08034 283 aa3.98□□□□□ -1.77
CHD9-211ENST00000564600 POU2F2P09086 479 aa3.98□□□□□ -1.77
CHD9-211ENST00000564600 PPP3CBP16298 524 aa3.98□□□□□ -1.77
CHD9-211ENST00000564600 TOB1P50616 345 aaPredicted RBP3.98□□□□□ -1.77
CHD9-211ENST00000564600 MAP2K6P52564 334 aa3.98□□□□□ -1.77
CHD9-211ENST00000564600 FPGSQ05932 587 aa3.98□□□□□ -1.77
CHD9-211ENST00000564600 NOGQ13253 232 aa3.98□□□□□ -1.77
CHD9-211ENST00000564600 KIAA0895LQ68EN5 471 aa3.98□□□□□ -1.77
CHD9-211ENST00000564600 PPP4R3AQ6IN85 833 aa3.98□□□□□ -1.77
CHD9-211ENST00000564600 TAPT1Q6NXT6 567 aa3.98□□□□□ -1.77
CHD9-211ENST00000564600 SLC30A10Q6XR72 485 aa3.98□□□□□ -1.77
CHD9-211ENST00000564600 USP45Q70EL2 814 aa3.98□□□□□ -1.77
CHD9-211ENST00000564600 CLNKQ7Z7G1 428 aa3.98□□□□□ -1.77
CHD9-211ENST00000564600 PPP1R3BQ86XI6 285 aa3.98□□□□□ -1.77
CHD9-211ENST00000564600 CELF5Q8N6W0 485 aaKnown RBP3.98□□□□□ -1.77
CHD9-211ENST00000564600 MYCBPAPQ8TBZ2 947 aa3.98□□□□□ -1.77
CHD9-211ENST00000564600 ACTRT2Q8TDY3 377 aa3.98□□□□□ -1.77
CHD9-211ENST00000564600 TFAP2BQ92481 460 aa3.98□□□□□ -1.77
CHD9-211ENST00000564600 TRIB1Q96RU8 372 aa3.98□□□□□ -1.77
CHD9-211ENST00000564600 INTS13Q9NVM9 706 aa3.98□□□□□ -1.77
CHD9-211ENST00000564600 ETAA1Q9NY74 926 aa3.98□□□□□ -1.77
CHD9-211ENST00000564600 ABCF2Q9UG63 623 aa3.98□□□□□ -1.77
CHD9-211ENST00000564600 CCDC195A0A1B0GUA6 201 aa3.97□□□□□ -1.77
CHD9-211ENST00000564600 TOR1BO14657 336 aa3.97□□□□□ -1.77
CHD9-211ENST00000564600 VPS4BO75351 444 aa3.97□□□□□ -1.77
CHD9-211ENST00000564600 SNUPNO95149 360 aaKnown RBP3.97□□□□□ -1.77
CHD9-211ENST00000564600 SRGNP10124 158 aa3.97□□□□□ -1.77
CHD9-211ENST00000564600 CHRM3P20309 590 aa3.97□□□□□ -1.77
CHD9-211ENST00000564600 ANXA11P50995 505 aaKnown RBP3.97□□□□□ -1.77
CHD9-211ENST00000564600 ZNF135P52742 658 aaPredicted RBP3.97□□□□□ -1.77
CHD9-211ENST00000564600 HK3P52790 923 aa3.97□□□□□ -1.77
CHD9-211ENST00000564600 MAPK10P53779 464 aa3.97□□□□□ -1.77
CHD9-211ENST00000564600 KRTAP10-7P60409 375 aaPredicted RBP3.97□□□□□ -1.77
CHD9-211ENST00000564600 RPS7P62081 194 aaKnown RBP3.97□□□□□ -1.77
CHD9-211ENST00000564600 MRPS35P82673 323 aaKnown RBP3.97□□□□□ -1.77
CHD9-211ENST00000564600 ZNF844Q08AG5 666 aa3.97□□□□□ -1.77
CHD9-211ENST00000564600 BOP1Q14137 746 aaKnown RBP3.97□□□□□ -1.77
CHD9-211ENST00000564600 KRTAP5-11Q6L8G4 156 aa3.97□□□□□ -1.77
CHD9-211ENST00000564600 HEATR3Q7Z4Q2 680 aa3.97□□□□□ -1.77
CHD9-211ENST00000564600 SH2D3CQ8N5H7 860 aa3.97□□□□□ -1.77
CHD9-211ENST00000564600 C3orf20Q8ND61 904 aa3.97□□□□□ -1.77
CHD9-211ENST00000564600 POC1BQ8TC44 478 aa3.97□□□□□ -1.77
CHD9-211ENST00000564600 KLK15Q9H2R5 256 aa3.97□□□□□ -1.77
CHD9-211ENST00000564600 MRPL46Q9H2W6 279 aaKnown RBP3.97□□□□□ -1.77
CHD9-211ENST00000564600 BRD9Q9H8M2 597 aa3.97□□□□□ -1.77
CHD9-211ENST00000564600 LRIT1Q9P2V4 623 aa3.97□□□□□ -1.77
CHD9-211ENST00000564600 ANKRD62A6NC57 917 aa3.96□□□□□ -1.78
CHD9-211ENST00000564600 ADM5C9JUS6 153 aa3.96□□□□□ -1.78
CHD9-211ENST00000564600 POLRMTO00411 1230 aaKnown RBP3.96□□□□□ -1.78
CHD9-211ENST00000564600 PROM1O43490 865 aa3.96□□□□□ -1.78
CHD9-211ENST00000564600 PEX1O43933 1283 aa3.96□□□□□ -1.78
CHD9-211ENST00000564600 KIF20AO95235 890 aa3.96□□□□□ -1.78
CHD9-211ENST00000564600 IL33O95760 270 aa3.96□□□□□ -1.78
CHD9-211ENST00000564600 FTLP02792 175 aaPredicted RBP3.96□□□□□ -1.78
CHD9-211ENST00000564600 ALDH2P05091 517 aa3.96□□□□□ -1.78
CHD9-211ENST00000564600 RHOP08100 348 aa3.96□□□□□ -1.78
CHD9-211ENST00000564600 FOLR3P41439 243 aa3.96□□□□□ -1.78
CHD9-211ENST00000564600 NEK2P51955 445 aa3.96□□□□□ -1.78
CHD9-211ENST00000564600 POU6F2P78424 691 aaPredicted RBP3.96□□□□□ -1.78
CHD9-211ENST00000564600 HABP2Q14520 560 aaPredicted RBP3.96□□□□□ -1.78
CHD9-211ENST00000564600 ERCC6LQ2NKX8 1250 aa3.96□□□□□ -1.78
CHD9-211ENST00000564600 TMEM240Q5SV17 173 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms