RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 SNX9Q9Y5X1 595 aa13.4□□□□□ -0.26
KARS-204ENST00000564578 IRAK3Q9Y616 596 aa13.4□□□□□ -0.26
KARS-204ENST00000564578 CYB561D2O14569 222 aa13.39□□□□□ -0.27
KARS-204ENST00000564578 SYN3O14994 580 aa13.39□□□□□ -0.27
KARS-204ENST00000564578 CYP11A1P05108 521 aa13.39□□□□□ -0.27
KARS-204ENST00000564578 POU3F3P20264 500 aaPredicted RBP13.39□□□□□ -0.27
KARS-204ENST00000564578 KCNA4P22459 653 aa13.39□□□□□ -0.27
KARS-204ENST00000564578 MYL7Q01449 175 aa13.39□□□□□ -0.27
KARS-204ENST00000564578 PTPN14Q15678 1187 aa13.39□□□□□ -0.27
KARS-204ENST00000564578 ZNF699Q32M78 642 aa13.39□□□□□ -0.27
KARS-204ENST00000564578 DSTYKQ6XUX3 929 aa13.39□□□□□ -0.27
KARS-204ENST00000564578 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.39□□□□□ -0.27
KARS-204ENST00000564578 MRPL43Q8N983 215 aaKnown RBP13.39□□□□□ -0.27
KARS-204ENST00000564578 RNF214Q8ND24 703 aa13.39□□□□□ -0.27
KARS-204ENST00000564578 VPS16Q9H269 839 aa13.39□□□□□ -0.27
KARS-204ENST00000564578 MTMR10Q9NXD2 777 aa13.39□□□□□ -0.27
KARS-204ENST00000564578 PCDHB8Q9UN66 801 aa13.39□□□□□ -0.27
KARS-204ENST00000564578 L1RE1Q9UN81 338 aa13.39□□□□□ -0.27
KARS-204ENST00000564578 R3HCC1Q9Y3T6 440 aaKnown RBP13.39□□□□□ -0.27
KARS-204ENST00000564578 COL4A4P53420 1690 aaPredicted RBP13.39□□□□□ -0.27
KARS-204ENST00000564578 C2orf71A6NGG8 1288 aa13.39□□□□□ -0.27
KARS-204ENST00000564578 C2CD2LO14523 706 aa13.39□□□□□ -0.27
KARS-204ENST00000564578 TBC1D4O60343 1298 aa13.39□□□□□ -0.27
KARS-204ENST00000564578 OAZ2O95190 189 aa13.39□□□□□ -0.27
KARS-204ENST00000564578 CDK11BP21127 795 aaKnown RBP13.39□□□□□ -0.27
KARS-204ENST00000564578 GLUD2P49448 558 aa13.39□□□□□ -0.27
KARS-204ENST00000564578 VARS2Q5ST30 1063 aaKnown RBP13.39□□□□□ -0.27
KARS-204ENST00000564578 WSCD1Q658N2 575 aa13.39□□□□□ -0.27
KARS-204ENST00000564578 PRSS55Q6UWB4 352 aaPredicted RBP13.39□□□□□ -0.27
KARS-204ENST00000564578 RSPO2Q6UXX9 243 aaPredicted RBP13.39□□□□□ -0.27
KARS-204ENST00000564578 PDCL2Q8N4E4 241 aa13.39□□□□□ -0.27
KARS-204ENST00000564578 PIK3R5Q8WYR1 880 aa13.39□□□□□ -0.27
KARS-204ENST00000564578 TAF4BQ92750 862 aa13.39□□□□□ -0.27
KARS-204ENST00000564578 CDX2Q99626 313 aaPredicted RBP13.39□□□□□ -0.27
KARS-204ENST00000564578 CRACR2AQ9BSW2 395 aa13.39□□□□□ -0.27
KARS-204ENST00000564578 LMAN2LQ9H0V9 348 aa13.39□□□□□ -0.27
KARS-204ENST00000564578 NXF1Q9UBU9 619 aaKnown RBP13.39□□□□□ -0.27
KARS-204ENST00000564578 POLIQ9UNA4 740 aa13.39□□□□□ -0.27
KARS-204ENST00000564578 MTCH2Q9Y6C9 303 aa13.39□□□□□ -0.27
KARS-204ENST00000564578 N4BP1O75113 896 aaKnown RBP13.38□□□□□ -0.27
KARS-204ENST00000564578 CXCL14O95715 111 aa13.38□□□□□ -0.27
KARS-204ENST00000564578 ASPAP45381 313 aa13.38□□□□□ -0.27
KARS-204ENST00000564578 COPB1P53618 953 aaKnown RBP13.38□□□□□ -0.27
KARS-204ENST00000564578 NOP14P78316 857 aaKnown RBP13.38□□□□□ -0.27
KARS-204ENST00000564578 PLPP4Q5VZY2 271 aa13.38□□□□□ -0.27
KARS-204ENST00000564578 KIAA1841Q6NSI8 718 aa13.38□□□□□ -0.27
KARS-204ENST00000564578 DPY19L2P1Q6NXN4 242 aa13.38□□□□□ -0.27
KARS-204ENST00000564578 GPR65Q8IYL9 337 aa13.38□□□□□ -0.27
KARS-204ENST00000564578 MICAL1Q8TDZ2 1067 aa13.38□□□□□ -0.27
KARS-204ENST00000564578 KBTBD7Q8WVZ9 684 aa13.38□□□□□ -0.27
KARS-204ENST00000564578 RIN2Q8WYP3 895 aaPredicted RBP13.38□□□□□ -0.27
KARS-204ENST00000564578 TATDN2Q93075 761 aa13.38□□□□□ -0.27
KARS-204ENST00000564578 RTP3Q9BQQ7 232 aa13.38□□□□□ -0.27
KARS-204ENST00000564578 NGRNQ9NPE2 291 aaKnown RBP13.38□□□□□ -0.27
KARS-204ENST00000564578 ENTPD7Q9NQZ7 604 aa13.38□□□□□ -0.27
KARS-204ENST00000564578 MRPL17Q9NRX2 175 aaKnown RBP13.38□□□□□ -0.27
KARS-204ENST00000564578 ATG2AQ2TAZ0 1938 aa13.38□□□□□ -0.27
KARS-204ENST00000564578 GTPBP10A4D1E9 387 aaKnown RBP13.37□□□□□ -0.27
KARS-204ENST00000564578 GABRDO14764 452 aa13.37□□□□□ -0.27
KARS-204ENST00000564578 CNPP09543 421 aaKnown RBP13.37□□□□□ -0.27
KARS-204ENST00000564578 ODC1P11926 461 aa13.37□□□□□ -0.27
KARS-204ENST00000564578 RPL17P18621 184 aaKnown RBP13.37□□□□□ -0.27
KARS-204ENST00000564578 SLC9A1P19634 815 aa13.37□□□□□ -0.27
KARS-204ENST00000564578 TYMPP19971 482 aa13.37□□□□□ -0.27
KARS-204ENST00000564578 CDH8P55286 799 aa13.37□□□□□ -0.27
KARS-204ENST00000564578 APBA1Q02410 837 aa13.37□□□□□ -0.27
KARS-204ENST00000564578 YWHAHQ04917 246 aaPredicted RBP13.37□□□□□ -0.27
KARS-204ENST00000564578 KCNMA1Q12791 1236 aa13.37□□□□□ -0.27
KARS-204ENST00000564578 ZNF667Q5HYK9 610 aa13.37□□□□□ -0.27
KARS-204ENST00000564578 DPH6Q7L8W6 267 aa13.37□□□□□ -0.27
KARS-204ENST00000564578 ADGRD2Q7Z7M1 963 aa13.37□□□□□ -0.27
KARS-204ENST00000564578 TOP6BLQ8N6T0 577 aa13.37□□□□□ -0.27
KARS-204ENST00000564578 EHBP1Q8NDI1 1231 aa13.37□□□□□ -0.27
KARS-204ENST00000564578 APPL2Q8NEU8 664 aa13.37□□□□□ -0.27
KARS-204ENST00000564578 MMS19Q96T76 1030 aa13.37□□□□□ -0.27
KARS-204ENST00000564578 CLSTN3Q9BQT9 956 aa13.37□□□□□ -0.27
KARS-204ENST00000564578 SDCBP2Q9H190 292 aa13.37□□□□□ -0.27
KARS-204ENST00000564578 RBSNQ9H1K0 784 aa13.37□□□□□ -0.27
KARS-204ENST00000564578 SMYD3Q9H7B4 428 aa13.37□□□□□ -0.27
KARS-204ENST00000564578 RXFP1Q9HBX9 757 aa13.37□□□□□ -0.27
KARS-204ENST00000564578 LMCD1Q9NZU5 365 aa13.37□□□□□ -0.27
KARS-204ENST00000564578 NME7Q9Y5B8 376 aa13.37□□□□□ -0.27
KARS-204ENST00000564578 ADAM12O43184 909 aa13.37□□□□□ -0.27
KARS-204ENST00000564578 HCRTO43612 131 aa13.37□□□□□ -0.27
KARS-204ENST00000564578 HUS1O60921 280 aa13.37□□□□□ -0.27
KARS-204ENST00000564578 URODP06132 367 aa13.37□□□□□ -0.27
KARS-204ENST00000564578 PON1P27169 355 aa13.37□□□□□ -0.27
KARS-204ENST00000564578 DEKP35659 375 aaKnown RBP13.37□□□□□ -0.27
KARS-204ENST00000564578 SMC1AQ14683 1233 aaKnown RBP13.37□□□□□ -0.27
KARS-204ENST00000564578 PTPROQ16827 1216 aa13.37□□□□□ -0.27
KARS-204ENST00000564578 OVOS1Q6IE37 1185 aa13.37□□□□□ -0.27
KARS-204ENST00000564578 PDE12Q6L8Q7 609 aaKnown RBP13.37□□□□□ -0.27
KARS-204ENST00000564578 TRIM65Q6PJ69 517 aa13.37□□□□□ -0.27
KARS-204ENST00000564578 ANKS3Q6ZW76 656 aa13.37□□□□□ -0.27
KARS-204ENST00000564578 MYLIPQ8WY64 445 aa13.37□□□□□ -0.27
KARS-204ENST00000564578 NAP1L5Q96NT1 182 aaPredicted RBP13.37□□□□□ -0.27
KARS-204ENST00000564578 ARID3AQ99856 593 aa13.37□□□□□ -0.27
KARS-204ENST00000564578 BCO2Q9BYV7 579 aa13.37□□□□□ -0.27
KARS-204ENST00000564578 IMPG2Q9BZV3 1241 aa13.37□□□□□ -0.27
KARS-204ENST00000564578 GCNT4Q9P109 453 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms