RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 BMP1P13497 986 aa18.19■□□□□ 0.5
CMTM3-208ENST00000564247 P4HA1P13674 534 aa18.19■□□□□ 0.5
CMTM3-208ENST00000564247 PPM1AP35813 382 aa18.19■□□□□ 0.5
CMTM3-208ENST00000564247 PNPLA4P41247 253 aa18.19■□□□□ 0.5
CMTM3-208ENST00000564247 ZNF699Q32M78 642 aa18.19■□□□□ 0.5
CMTM3-208ENST00000564247 FIGNQ5HY92 759 aa18.19■□□□□ 0.5
CMTM3-208ENST00000564247 KLHDC7AQ5VTJ3 777 aa18.19■□□□□ 0.5
CMTM3-208ENST00000564247 LRRC52Q8N7C0 313 aa18.19■□□□□ 0.5
CMTM3-208ENST00000564247 CPLX3Q8WVH0 158 aa18.19■□□□□ 0.5
CMTM3-208ENST00000564247 PABPC5Q96DU9 382 aaKnown RBP18.19■□□□□ 0.5
CMTM3-208ENST00000564247 ZNF560Q96MR9 790 aa18.19■□□□□ 0.5
CMTM3-208ENST00000564247 PI4K2AQ9BTU6 479 aa18.19■□□□□ 0.5
CMTM3-208ENST00000564247 TBC1D13Q9NVG8 400 aa18.19■□□□□ 0.5
CMTM3-208ENST00000564247 APEX2Q9UBZ4 518 aa18.19■□□□□ 0.5
CMTM3-208ENST00000564247 SIX4Q9UIU6 781 aa18.19■□□□□ 0.5
CMTM3-208ENST00000564247 LZTS1Q9Y250 596 aa18.19■□□□□ 0.5
CMTM3-208ENST00000564247 ANO9A1A5B4 782 aa18.18■□□□□ 0.5
CMTM3-208ENST00000564247 PIRO00625 290 aa18.18■□□□□ 0.5
CMTM3-208ENST00000564247 STAU1O95793 577 aaKnown RBP18.18■□□□□ 0.5
CMTM3-208ENST00000564247 ASS1P00966 412 aaKnown RBP18.18■□□□□ 0.5
CMTM3-208ENST00000564247 RFX1P22670 979 aa18.18■□□□□ 0.5
CMTM3-208ENST00000564247 PAX3P23760 479 aa18.18■□□□□ 0.5
CMTM3-208ENST00000564247 IRS1P35568 1242 aa18.18■□□□□ 0.5
CMTM3-208ENST00000564247 KCNQ1P51787 676 aa18.18■□□□□ 0.5
CMTM3-208ENST00000564247 MFAP3P55082 362 aa18.18■□□□□ 0.5
CMTM3-208ENST00000564247 POLR2FP61218 127 aaKnown RBP18.18■□□□□ 0.5
CMTM3-208ENST00000564247 SOX4Q06945 474 aaPredicted RBP18.18■□□□□ 0.5
CMTM3-208ENST00000564247 CCDC173Q0VFZ6 552 aa18.18■□□□□ 0.5
CMTM3-208ENST00000564247 NAB2Q15742 525 aa18.18■□□□□ 0.5
CMTM3-208ENST00000564247 ZNF667Q5HYK9 610 aa18.18■□□□□ 0.5
CMTM3-208ENST00000564247 PPP2R3CQ969Q6 453 aa18.18■□□□□ 0.5
CMTM3-208ENST00000564247 UBE2TQ9NPD8 197 aaPredicted RBP18.18■□□□□ 0.5
CMTM3-208ENST00000564247 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.18■□□□□ 0.5
CMTM3-208ENST00000564247 TLR9Q9NR96 1032 aa18.18■□□□□ 0.5
CMTM3-208ENST00000564247 SPG21Q9NZD8 308 aa18.18■□□□□ 0.5
CMTM3-208ENST00000564247 CEP72Q9P209 647 aa18.18■□□□□ 0.5
CMTM3-208ENST00000564247 CARNS1A5YM72 827 aa18.17■□□□□ 0.5
CMTM3-208ENST00000564247 PODXLO00592 558 aa18.17■□□□□ 0.5
CMTM3-208ENST00000564247 ALDH2P05091 517 aa18.17■□□□□ 0.5
CMTM3-208ENST00000564247 UCHL3P15374 230 aa18.17■□□□□ 0.5
CMTM3-208ENST00000564247 TBXAS1P24557 533 aaPredicted RBP18.17■□□□□ 0.5
CMTM3-208ENST00000564247 ALDH7A1P49419 539 aaKnown RBP18.17■□□□□ 0.5
CMTM3-208ENST00000564247 TAF6P49848 677 aa18.17■□□□□ 0.5
CMTM3-208ENST00000564247 NOP14P78316 857 aaKnown RBP18.17■□□□□ 0.5
CMTM3-208ENST00000564247 HYAL1Q12794 435 aa18.17■□□□□ 0.5
CMTM3-208ENST00000564247 CTC1Q2NKJ3 1217 aa18.17■□□□□ 0.5
CMTM3-208ENST00000564247 TSR1Q2NL82 804 aaKnown RBP18.17■□□□□ 0.5
CMTM3-208ENST00000564247 LEXMQ3ZCV2 418 aa18.17■□□□□ 0.5
CMTM3-208ENST00000564247 SV2CQ496J9 727 aa18.17■□□□□ 0.5
CMTM3-208ENST00000564247 PDE12Q6L8Q7 609 aaKnown RBP18.17■□□□□ 0.5
CMTM3-208ENST00000564247 DCLRE1AQ6PJP8 1040 aa18.17■□□□□ 0.5
CMTM3-208ENST00000564247 ENOSF1Q7L5Y1 443 aa18.17■□□□□ 0.5
CMTM3-208ENST00000564247 SLC39A11Q8N1S5 342 aa18.17■□□□□ 0.5
CMTM3-208ENST00000564247 PPM1KQ8N3J5 372 aa18.17■□□□□ 0.5
CMTM3-208ENST00000564247 CXorf38Q8TB03 319 aa18.17■□□□□ 0.5
CMTM3-208ENST00000564247 ADAMTS19Q8TE59 1207 aa18.17■□□□□ 0.5
CMTM3-208ENST00000564247 FAXDC2Q96IV6 333 aa18.17■□□□□ 0.5
CMTM3-208ENST00000564247 VRTNQ9H8Y1 702 aa18.17■□□□□ 0.5
CMTM3-208ENST00000564247 GOLGA2P5Q9HBQ8 144 aa18.17■□□□□ 0.5
CMTM3-208ENST00000564247 SIX2Q9NPC8 291 aa18.17■□□□□ 0.5
CMTM3-208ENST00000564247 PUF60Q9UHX1 559 aaKnown RBP18.17■□□□□ 0.5
CMTM3-208ENST00000564247 FBXL5Q9UKA1 691 aa18.17■□□□□ 0.5
CMTM3-208ENST00000564247 DNAJC12Q9UKB3 198 aa18.17■□□□□ 0.5
CMTM3-208ENST00000564247 CAPN11Q9UMQ6 739 aa18.17■□□□□ 0.5
CMTM3-208ENST00000564247 LUC7L2Q9Y383 392 aaKnown RBP18.17■□□□□ 0.5
CMTM3-208ENST00000564247 NCOR1O75376 2440 aa18.17■□□□□ 0.5
CMTM3-208ENST00000564247 A0A1W2PQJ5 194 aa18.16■□□□□ 0.5
CMTM3-208ENST00000564247 CASTOR2A6NHX0 329 aa18.16■□□□□ 0.5
CMTM3-208ENST00000564247 LRRN2O75325 713 aa18.16■□□□□ 0.5
CMTM3-208ENST00000564247 NOL4O94818 638 aa18.16■□□□□ 0.5
CMTM3-208ENST00000564247 DDHD2O94830 711 aa18.16■□□□□ 0.5
CMTM3-208ENST00000564247 CSPG5O95196 566 aa18.16■□□□□ 0.5
CMTM3-208ENST00000564247 KCNA5P22460 613 aa18.16■□□□□ 0.5
CMTM3-208ENST00000564247 PBX3P40426 434 aa18.16■□□□□ 0.5
CMTM3-208ENST00000564247 CLCNKBP51801 687 aa18.16■□□□□ 0.5
CMTM3-208ENST00000564247 BCAR1P56945 870 aa18.16■□□□□ 0.5
CMTM3-208ENST00000564247 TNNC1P63316 161 aa18.16■□□□□ 0.5
CMTM3-208ENST00000564247 KRT17Q04695 432 aa18.16■□□□□ 0.5
CMTM3-208ENST00000564247 TBX2Q13207 712 aaPredicted RBP18.16■□□□□ 0.5
CMTM3-208ENST00000564247 WDR72Q3MJ13 1102 aa18.16■□□□□ 0.5
CMTM3-208ENST00000564247 PHLDB3Q6NSJ2 640 aa18.16■□□□□ 0.5
CMTM3-208ENST00000564247 ZNF280BQ86YH2 543 aa18.16■□□□□ 0.5
CMTM3-208ENST00000564247 TATDN2Q93075 761 aa18.16■□□□□ 0.5
CMTM3-208ENST00000564247 TMEM175Q9BSA9 504 aa18.16■□□□□ 0.5
CMTM3-208ENST00000564247 COLEC11Q9BWP8 271 aa18.16■□□□□ 0.5
CMTM3-208ENST00000564247 XYLT2Q9H1B5 865 aa18.16■□□□□ 0.5
CMTM3-208ENST00000564247 GANQ9H2C0 597 aa18.16■□□□□ 0.5
CMTM3-208ENST00000564247 NLRC4Q9NPP4 1024 aa18.16■□□□□ 0.5
CMTM3-208ENST00000564247 NXF1Q9UBU9 619 aaKnown RBP18.16■□□□□ 0.5
CMTM3-208ENST00000564247 NUB1Q9Y5A7 615 aa18.16■□□□□ 0.5
CMTM3-208ENST00000564247 AKR1B15C9JRZ8 316 aaPredicted RBP18.15■□□□□ 0.5
CMTM3-208ENST00000564247 FSCN2O14926 492 aa18.15■□□□□ 0.5
CMTM3-208ENST00000564247 PTMAP06454 111 aaKnown RBP18.15■□□□□ 0.5
CMTM3-208ENST00000564247 CASP14P31944 242 aa18.15■□□□□ 0.5
CMTM3-208ENST00000564247 OR1G1P47890 313 aa18.15■□□□□ 0.5
CMTM3-208ENST00000564247 GSDMDP57764 484 aa18.15■□□□□ 0.5
CMTM3-208ENST00000564247 ERVFC1P60507 584 aa18.15■□□□□ 0.5
CMTM3-208ENST00000564247 GCNT1Q02742 428 aa18.15■□□□□ 0.5
CMTM3-208ENST00000564247 DSC1Q08554 894 aa18.15■□□□□ 0.5
CMTM3-208ENST00000564247 RAPGEF1Q13905 1077 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms